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The map label for this gene is rpmI

Identifier: 110678353

GI number: 110678353

Start: 971357

End: 971557

Strand: Direct

Name: rpmI

Synonym: RD1_1009

Alternate gene names: 110678353

Gene position: 971357-971557 (Clockwise)

Preceding gene: 110678351

Following gene: 110678354

Centisome position: 23.5

GC content: 57.21

Gene sequence:

>201_bases
ATGCCCAAGATGAAGACGAAATCAAGCGCCAAGAAGCGCTTCAAGGTGACGGCCACTGGCAAGGTCATCGGCGGCCAGGC
GGGCAAACGCCACGGCATGATCAAGCGGACCAAGAAGTTCATTCGCGACGCACGCGGCACGACAGTTCTGTCCGAGCCAG
ATGCAAAGATCATCAAGGGCTTCATGCCCTACGACCGTTAA

Upstream 100 bases:

>100_bases
TAGTCGGTTTGATCCCCTAAAGAGCGATTTCTCGAACGCGGGACCGGCCAAAGCGGCATGCCGAGTCGCGCTTAAACCGA
TCTGAGACAAGGAGACGGAA

Downstream 100 bases:

>100_bases
GGAGAGCCGAAGATGTCCCGTACCAAAGGTGGAACAGTCACCCACGCCCGTCACAAGAAAGTCATCAAGGCCGCCAAAGG
TTACTACGGTCGCCGCAAGA

Product: 50S ribosomal protein L35

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 65

Protein sequence:

>66_residues
MPKMKTKSSAKKRFKVTATGKVIGGQAGKRHGMIKRTKKFIRDARGTTVLSEPDAKIIKGFMPYDR

Sequences:

>Translated_66_residues
MPKMKTKSSAKKRFKVTATGKVIGGQAGKRHGMIKRTKKFIRDARGTTVLSEPDAKIIKGFMPYDR
>Mature_65_residues
PKMKTKSSAKKRFKVTATGKVIGGQAGKRHGMIKRTKKFIRDARGTTVLSEPDAKIIKGFMPYDR

Specific function: Unknown

COG id: COG0291

COG function: function code J; Ribosomal protein L35

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L35P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL35_ROSDO (Q16BG9)

Other databases:

- EMBL:   CP000362
- RefSeq:   YP_681360.1
- ProteinModelPortal:   Q16BG9
- SMR:   Q16BG9
- STRING:   Q16BG9
- GeneID:   4198255
- GenomeReviews:   CP000362_GR
- KEGG:   rde:RD1_1009
- NMPDR:   fig|375451.6.peg.946
- eggNOG:   COG0291
- HOGENOM:   HBG734125
- OMA:   AHAGKRH
- ProtClustDB:   PRK00172
- BioCyc:   RDEN375451:RD1_1009-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00514
- InterPro:   IPR021137
- InterPro:   IPR018265
- InterPro:   IPR001706
- PRINTS:   PR00064
- TIGRFAMs:   TIGR00001

Pfam domain/function: PF01632 Ribosomal_L35p

EC number: NA

Molecular weight: Translated: 7381; Mature: 7250

Theoretical pI: Translated: 11.84; Mature: 11.84

Prosite motif: PS00936 RIBOSOMAL_L35

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKMKTKSSAKKRFKVTATGKVIGGQAGKRHGMIKRTKKFIRDARGTTVLSEPDAKIIKG
CCCCCCCCCCCCEEEEEECCEEECCCCCCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHC
FMPYDR
CCCCCC
>Mature Secondary Structure 
PKMKTKSSAKKRFKVTATGKVIGGQAGKRHGMIKRTKKFIRDARGTTVLSEPDAKIIKG
CCCCCCCCCCCEEEEEECCEEECCCCCCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHC
FMPYDR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA