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The map label for this gene is ycjG [H]

Identifier: 110678347

GI number: 110678347

Start: 965932

End: 966897

Strand: Direct

Name: ycjG [H]

Synonym: RD1_1003

Alternate gene names: 110678347

Gene position: 965932-966897 (Clockwise)

Preceding gene: 110678346

Following gene: 110678348

Centisome position: 23.37

GC content: 61.8

Gene sequence:

>966_bases
ATGAAGATTGACGTCTCGCGTGACGTGTTCAGGCTGGCTCAGGTGTTCACCATCAGTCGTGGATCGCGCAGCGAAGCGCA
TGTCCTGACCGTGCGTGTGAGCGATGGCACCCACAGCGGCTGGGGCGAATGCGTACCCTATGCGCGCTACGGCGAAACAC
TGGACAGTGTGACAGACGAAATCCTCGGCCTTCCGCCGCAGATTAACCGCGCGACCTTGCAAGACATGTTACCGGCAGGG
GCTGCGCGCAATGCGGTGGATTGCGCCCTTTGGGATCTGGAAGCGAAACGCGCGGGCAAACGGGTTTGGGCGCTTGCCGG
TCTGGCGGCGCCGGTGCCGCAGATCACGGCCTATACGCTGTCGCTGGACAGCCCCGAAGCCATGCGTCAGCAGGCGGTCA
AAAATGCGCATCGACCTGTGTTGAAAATCAAGCTGGGGACGCCTGATGACATGCCACGGCTCAAGGCTGTGCGGGCCGGT
GCGCCGAAGTCAAAGATCATCGTGGATGCAAACGAAGGGTGGTCTGCCGAGGTTTACGCGGAACTGGCCCCGCATCTGGT
GGCATTGGGGGTCGCATTGGTTGAACAGCCCTTGCCTGCGGGCGAGGATTCGGCGTTGATCGGCATGGACCGCCCGGTGC
CGGTCTGTGCGGACGAAAGCTGTCACGACCGGGCCAGCCTCGCCGGATTGAAAGGCAAATATGATGTCATCAACATCAAG
CTCGACAAGACCGGCGGCTTGACCGAGGCGCTTGCCTTGCGTAGCGAAGGGGAAGCAATGGGCTACGGCGTGATGGTCGG
GTGCATGGTCGGCTCCAGCCTTGCCATGGCCCCGGCAACGCTTGTGGCGCAGGGTGCGTCAGTAGTGGACCTTGATGGGC
CGCTGCTTTTGGCCGAGGATCGGGACCACCCGTTGGAATTTGATGACAAGGGCGTTCACCCGCCTGAAAAGGAGCTTTGG
GGATGA

Upstream 100 bases:

>100_bases
CCACGGTTGATCCTTTCCGCCATGGGGCAGATCGTCTGGCGGAAGCGCTGGCCGCCCTGTAGGTATTGCCAGCGGTTTCT
CAGCCCCGGAAGGGAATACA

Downstream 100 bases:

>100_bases
CATTGCGGACTGTCTATGTGAACGGCGAATACGTGCCAGAGAATGAAGCACGGGTTTCGATCTTTGATCGCGGATTCCTG
ATGGCGGACGGTGTCTATGA

Product: hypothetical protein

Products: NA

Alternate protein names: AE epimerase; AEE [H]

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MKIDVSRDVFRLAQVFTISRGSRSEAHVLTVRVSDGTHSGWGECVPYARYGETLDSVTDEILGLPPQINRATLQDMLPAG
AARNAVDCALWDLEAKRAGKRVWALAGLAAPVPQITAYTLSLDSPEAMRQQAVKNAHRPVLKIKLGTPDDMPRLKAVRAG
APKSKIIVDANEGWSAEVYAELAPHLVALGVALVEQPLPAGEDSALIGMDRPVPVCADESCHDRASLAGLKGKYDVINIK
LDKTGGLTEALALRSEGEAMGYGVMVGCMVGSSLAMAPATLVAQGASVVDLDGPLLLAEDRDHPLEFDDKGVHPPEKELW
G

Sequences:

>Translated_321_residues
MKIDVSRDVFRLAQVFTISRGSRSEAHVLTVRVSDGTHSGWGECVPYARYGETLDSVTDEILGLPPQINRATLQDMLPAG
AARNAVDCALWDLEAKRAGKRVWALAGLAAPVPQITAYTLSLDSPEAMRQQAVKNAHRPVLKIKLGTPDDMPRLKAVRAG
APKSKIIVDANEGWSAEVYAELAPHLVALGVALVEQPLPAGEDSALIGMDRPVPVCADESCHDRASLAGLKGKYDVINIK
LDKTGGLTEALALRSEGEAMGYGVMVGCMVGSSLAMAPATLVAQGASVVDLDGPLLLAEDRDHPLEFDDKGVHPPEKELW
G
>Mature_321_residues
MKIDVSRDVFRLAQVFTISRGSRSEAHVLTVRVSDGTHSGWGECVPYARYGETLDSVTDEILGLPPQINRATLQDMLPAG
AARNAVDCALWDLEAKRAGKRVWALAGLAAPVPQITAYTLSLDSPEAMRQQAVKNAHRPVLKIKLGTPDDMPRLKAVRAG
APKSKIIVDANEGWSAEVYAELAPHLVALGVALVEQPLPAGEDSALIGMDRPVPVCADESCHDRASLAGLKGKYDVINIK
LDKTGGLTEALALRSEGEAMGYGVMVGCMVGSSLAMAPATLVAQGASVVDLDGPLLLAEDRDHPLEFDDKGVHPPEKELW
G

Specific function: Catalyzes the epimerization of L-Ala-D-Glu to L-Ala-L- Glu and has a role in the recycling of the murein peptide, of which L-Ala-D-Glu is a component. Is also able to catalyze the reverse reaction and the epimerization of all the L-Ala-X dipeptides, excep

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family [H]

Homologues:

Organism=Escherichia coli, GI87081876, Length=317, Percent_Identity=45.7413249211356, Blast_Score=259, Evalue=2e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018110
- InterPro:   IPR013342
- InterPro:   IPR013341
- InterPro:   IPR001354 [H]

Pfam domain/function: PF01188 MR_MLE; PF02746 MR_MLE_N [H]

EC number: NA

Molecular weight: Translated: 34167; Mature: 34167

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDVSRDVFRLAQVFTISRGSRSEAHVLTVRVSDGTHSGWGECVPYARYGETLDSVTDE
CEECCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCHHCCCHHHHHHHHHHHHHH
ILGLPPQINRATLQDMLPAGAARNAVDCALWDLEAKRAGKRVWALAGLAAPVPQITAYTL
HHCCCCCCCHHHHHHHHCCCCCCCCCEEEEEHHHHHHCCCEEEEHHHHCCCCCCEEEEEE
SLDSPEAMRQQAVKNAHRPVLKIKLGTPDDMPRLKAVRAGAPKSKIIVDANEGWSAEVYA
ECCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHHH
ELAPHLVALGVALVEQPLPAGEDSALIGMDRPVPVCADESCHDRASLAGLKGKYDVINIK
HHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEE
LDKTGGLTEALALRSEGEAMGYGVMVGCMVGSSLAMAPATLVAQGASVVDLDGPLLLAED
ECCCCCHHHHHHHHCCCCCCCHHHHEEHHHCCCHHHHHHHHHHCCCEEEECCCCEEEECC
RDHPLEFDDKGVHPPEKELWG
CCCCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure
MKIDVSRDVFRLAQVFTISRGSRSEAHVLTVRVSDGTHSGWGECVPYARYGETLDSVTDE
CEECCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCHHCCCHHHHHHHHHHHHHH
ILGLPPQINRATLQDMLPAGAARNAVDCALWDLEAKRAGKRVWALAGLAAPVPQITAYTL
HHCCCCCCCHHHHHHHHCCCCCCCCCEEEEEHHHHHHCCCEEEEHHHHCCCCCCEEEEEE
SLDSPEAMRQQAVKNAHRPVLKIKLGTPDDMPRLKAVRAGAPKSKIIVDANEGWSAEVYA
ECCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHHH
ELAPHLVALGVALVEQPLPAGEDSALIGMDRPVPVCADESCHDRASLAGLKGKYDVINIK
HHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEE
LDKTGGLTEALALRSEGEAMGYGVMVGCMVGSSLAMAPATLVAQGASVVDLDGPLLLAED
ECCCCCHHHHHHHHCCCCCCCHHHHEEHHHCCCHHHHHHHHHHCCCEEEECCCCEEEECC
RDHPLEFDDKGVHPPEKELWG
CCCCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7499381; 9097039; 9278503 [H]