Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110678339

Identifier: 110678339

GI number: 110678339

Start: 959637

End: 959963

Strand: Reverse

Name: 110678339

Synonym: RD1_0995

Alternate gene names: NA

Gene position: 959963-959637 (Counterclockwise)

Preceding gene: 110678342

Following gene: 110678336

Centisome position: 23.23

GC content: 55.66

Gene sequence:

>327_bases
ATGCCCAAGGAAGAATGGGGAACGAAACGCCTCTGCCCGACCACCGGCAAACGTTTCTACGATCTGAACGCCAGTCCGAT
CATCAGCCCCTATACTGGTGAAGTGGTCGAAGTGGACCTGAGCAAGTCACGCATGATCGCAGCAGACGCCGAAGACGCTG
CATCCGCCAAAGCGAAAGAAGCCGATACCGAAGAAGAAGCGGTACTGGACGATGATGACGTGGATGTGGATCTCGACGAT
GATCTGCTGGATGATGACGACGATGACACGGACAGCGTTCCGCTTGAGGAAATCGCTGACGTTGCGGCGGACGACGACGA
TAACTGA

Upstream 100 bases:

>100_bases
CGGGCTGTGCCACACGCGGCAGGTCTTTACAGACCCCGCCTCATATGGCACTTGCGCTCCAATCATCTACACCTTAACCG
CAAATTCAAAGGGGGTTTTC

Downstream 100 bases:

>100_bases
CCCAATTGCGCAGCGGGTTCGCTTTTACTCTTGATCCCGCTTCGCACTGCCGCTATCCAGCGGCGCAATGGGGCCTTAGC
TCAGCTGGGAGAGCGCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MPKEEWGTKRLCPTTGKRFYDLNASPIISPYTGEVVEVDLSKSRMIAADAEDAASAKAKEADTEEEAVLDDDDVDVDLDD
DLLDDDDDDTDSVPLEEIADVAADDDDN

Sequences:

>Translated_108_residues
MPKEEWGTKRLCPTTGKRFYDLNASPIISPYTGEVVEVDLSKSRMIAADAEDAASAKAKEADTEEEAVLDDDDVDVDLDD
DLLDDDDDDTDSVPLEEIADVAADDDDN
>Mature_107_residues
PKEEWGTKRLCPTTGKRFYDLNASPIISPYTGEVVEVDLSKSRMIAADAEDAASAKAKEADTEEEAVLDDDDVDVDLDDD
LLDDDDDDTDSVPLEEIADVAADDDDN

Specific function: Unknown

COG id: COG4530

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11782; Mature: 11651

Theoretical pI: Translated: 3.50; Mature: 3.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKEEWGTKRLCPTTGKRFYDLNASPIISPYTGEVVEVDLSKSRMIAADAEDAASAKAKE
CCCCCCCCCCCCCCCCCEEEECCCCCEECCCCCCEEEEECCCCEEEEECCCHHHHCCCCC
ADTEEEAVLDDDDVDVDLDDDLLDDDDDDTDSVPLEEIADVAADDDDN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
PKEEWGTKRLCPTTGKRFYDLNASPIISPYTGEVVEVDLSKSRMIAADAEDAASAKAKE
CCCCCCCCCCCCCCCCEEEECCCCCEECCCCCCEEEEECCCCEEEEECCCHHHHCCCCC
ADTEEEAVLDDDDVDVDLDDDLLDDDDDDTDSVPLEEIADVAADDDDN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA