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The map label for this gene is 110678288

Identifier: 110678288

GI number: 110678288

Start: 911453

End: 911911

Strand: Direct

Name: 110678288

Synonym: RD1_0941

Alternate gene names: NA

Gene position: 911453-911911 (Clockwise)

Preceding gene: 110678285

Following gene: 110678289

Centisome position: 22.05

GC content: 57.52

Gene sequence:

>459_bases
ATGAGCTTTACATCCCGCCTTGCACACCTCGGCGTCTCACTGCCGGATGCGCCCGCGCCCGCGGCGAACTACGTACCTTA
CGTCAGAATCGGCAATACGGTTTATGTTTCGGGTCAAATCTCAAGCGATTCGGATGGTATGATCATCGGGAAACTTGGCG
AAACCATGGATATCGACGCAGGTGCAGCAGCGGCGCGCTGCTGCGCGATCAGCCTCTTGGCGCAGGTTCAGGCGGCTTGT
GACGGAGATATCGAGCGGTTGGTCCGTGTGGTGAAACTGACCGGATTCGTAAACTCCACCGCCGATTTTGTGGATCAGCC
CAAAGTGATCAACGGCGCATCCGACTTTCTGGTCGAAGCGCTGGGGGATGCGGGGCGTCATTCGCGTTCAGCGGTGTCGG
CGGCGTCCCTGCCGTTTGGCGTTGCGGTGGAAATAGAAGGTATTTTCGAAGTTCAATGA

Upstream 100 bases:

>100_bases
TGCCACATCTGCACCGTAAAAGATGGAATCGGTACGTTTCGCCGGGTCGCGTCGCCATGCGCCAACCTCACATGATCAGG
CCCGGTCACAGGAGTTGAAA

Downstream 100 bases:

>100_bases
TACCCCATCTCCCTGAGGCGTTTCTGACGCGCCCTCTTGCTCACCGTGCGCTACATGACATTGCGCAGGGCCGTCCGGAG
AATAGCCGGGCGGCAATAAA

Product: endoribonuclease L-PSP family protein, putative

Products: NA

Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Translation Initiation Inhibitor YjgF Family; Endoribonuclease L-Psp; Endoribonuclease; Endoribonuclease L-PSP Superfamily; Transcriptional Regulator; L-PSP Family Endoribonuclease; Transcription Regulator; Translation Initiation Inhibitor Protein; Endoribonuclease Family Protein; YjgF Family Translation Initiation Inhibitor; Endoribonuclease L-PSP Family; 2-Aminomuconate Deaminase; YjgF-Family Protein; Creatininase; Translation Initiation Inhibitor YjgF; Endoribonuclease-L-PSP Family Protein

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSFTSRLAHLGVSLPDAPAPAANYVPYVRIGNTVYVSGQISSDSDGMIIGKLGETMDIDAGAAAARCCAISLLAQVQAAC
DGDIERLVRVVKLTGFVNSTADFVDQPKVINGASDFLVEALGDAGRHSRSAVSAASLPFGVAVEIEGIFEVQ

Sequences:

>Translated_152_residues
MSFTSRLAHLGVSLPDAPAPAANYVPYVRIGNTVYVSGQISSDSDGMIIGKLGETMDIDAGAAAARCCAISLLAQVQAAC
DGDIERLVRVVKLTGFVNSTADFVDQPKVINGASDFLVEALGDAGRHSRSAVSAASLPFGVAVEIEGIFEVQ
>Mature_151_residues
SFTSRLAHLGVSLPDAPAPAANYVPYVRIGNTVYVSGQISSDSDGMIIGKLGETMDIDAGAAAARCCAISLLAQVQAACD
GDIERLVRVVKLTGFVNSTADFVDQPKVINGASDFLVEALGDAGRHSRSAVSAASLPFGVAVEIEGIFEVQ

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15715; Mature: 15584

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFTSRLAHLGVSLPDAPAPAANYVPYVRIGNTVYVSGQISSDSDGMIIGKLGETMDIDA
CCHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEEEEEEEECCCCCCEEEECCCCEEECCC
GAAAARCCAISLLAQVQAACDGDIERLVRVVKLTGFVNSTADFVDQPKVINGASDFLVEA
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHCCCCEECCHHHHHHHH
LGDAGRHSRSAVSAASLPFGVAVEIEGIFEVQ
HHCCCCCCHHHHHHCCCCCEEEEEEEEEEECC
>Mature Secondary Structure 
SFTSRLAHLGVSLPDAPAPAANYVPYVRIGNTVYVSGQISSDSDGMIIGKLGETMDIDA
CHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEEEEEEEECCCCCCEEEECCCCEEECCC
GAAAARCCAISLLAQVQAACDGDIERLVRVVKLTGFVNSTADFVDQPKVINGASDFLVEA
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHCCCCEECCHHHHHHHH
LGDAGRHSRSAVSAASLPFGVAVEIEGIFEVQ
HHCCCCCCHHHHHHCCCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA