| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110678277
Identifier: 110678277
GI number: 110678277
Start: 900705
End: 900968
Strand: Direct
Name: 110678277
Synonym: RD1_0930
Alternate gene names: NA
Gene position: 900705-900968 (Clockwise)
Preceding gene: 110678276
Following gene: 110678278
Centisome position: 21.79
GC content: 53.03
Gene sequence:
>264_bases GTGGTATTTGCGCGTTTGATGGGAATGGCACTCGTTGCTCTGACGGTTGTATTCATTTGCCTGTGGTTTTACGCGCGTGC TGTCCGGCGCGAAAAACTCGAAGCGCAGTGGGATGAAAATCAGGGCCCGGGTCGGCGGGAAAGCTTTGTAAAGGCCGAGA TGTCCACGTATGAGGACACGTTAAAGCGCAAGCTGATCTGGGGTGTTTACATCATCCCCGGCTGCTTGCTTGCCGTTCTG ATATATGTGACCAATATGGGCTGA
Upstream 100 bases:
>100_bases TTTTGGGCCGCCAAAAAGGCGCACCTATTGCCGCTCTTGGGCTGCAACAGGCAAAACCGGCCCTATATGAAAGAAAGACT AGGGAAAAAGGACCAGATCT
Downstream 100 bases:
>100_bases GGTGACGGATATGATGTTTTACGTGAAATGGGTCTTCATTCTGGTCTTTTGGGGCCTGATTGGTTCTGTGCTGCACTACA CCCTGCCTCAGGTGGATATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MVFARLMGMALVALTVVFICLWFYARAVRREKLEAQWDENQGPGRRESFVKAEMSTYEDTLKRKLIWGVYIIPGCLLAVL IYVTNMG
Sequences:
>Translated_87_residues MVFARLMGMALVALTVVFICLWFYARAVRREKLEAQWDENQGPGRRESFVKAEMSTYEDTLKRKLIWGVYIIPGCLLAVL IYVTNMG >Mature_87_residues MVFARLMGMALVALTVVFICLWFYARAVRREKLEAQWDENQGPGRRESFVKAEMSTYEDTLKRKLIWGVYIIPGCLLAVL IYVTNMG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10049; Mature: 10049
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFARLMGMALVALTVVFICLWFYARAVRREKLEAQWDENQGPGRRESFVKAEMSTYEDT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LKRKLIWGVYIIPGCLLAVLIYVTNMG HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVFARLMGMALVALTVVFICLWFYARAVRREKLEAQWDENQGPGRRESFVKAEMSTYEDT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LKRKLIWGVYIIPGCLLAVLIYVTNMG HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA