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The map label for this gene is 110678198

Identifier: 110678198

GI number: 110678198

Start: 825123

End: 826145

Strand: Direct

Name: 110678198

Synonym: RD1_0846

Alternate gene names: NA

Gene position: 825123-826145 (Clockwise)

Preceding gene: 110678196

Following gene: 110678199

Centisome position: 19.96

GC content: 56.89

Gene sequence:

>1023_bases
ATGAACACAAAATCAATTACCCGGCGCGCGGCAATTGCTGCGGTGTCCGGTGTCATCGCGCTGACGTCTTATGCTGCGGC
TGCCGCTGCGGATACCACACGTCTGCGTATGCACACCTTTTACGGTACTGAAATCGATCCCATCATCAAGGCATTCCGTG
ACCGCGTCCGCGACGAGTCCGACGGCAGCCTGCGCATCAACGTGTTCCATGGTGGTGAATTGGTCGCCAGTGACCAGTTG
CTGAGCGCTGTGCAAAGCGGCTCGATTGACATCGCCCATGGCCATGGCGGCTACTGGTCGGGTCAGGTGGACATCGGCAA
TATCGAAGCGGGTCTGCCCGGTGGCTGGACCAGCCTTGAAGAGGCCAACGCGTTCTTCGCAAGCGAGCCTGTCGCGTCCA
TCCTGAACGAAGCATATAGTGAAGCAGGGGTCGTGTTCCTCGGCAAAGGCTATGGTCATGATTACGACTTGCTGACAAAA
GAGCCGATCGCATCGCTCGAAGACCTCAAATCCCTGCGCATCCGTGCGACGTCGAACGTTGCCAAAGTGCTTGAGAGCCT
CGAAATTCCGACTGTGTTCCTGCCCGCCGGTGAACTTTACATCGGCATGTCCACAGGTGTTATCGACGGCGCGATCTATG
GTGGGCCTATCGAGTATGAGCAACTCAAACTCAACGAAACCGCTCAGTATTACACCCGGCTGAACATGTTGATGCCCGGT
TGGACAGAGACCTTCCTCGCCAATGAGGACAAATGGGCGTCGCTGTCCGATGAGCACAAGGCGATCCTTGAAACTGCGCT
CGCGCAGTTCGCTCAGGACATCACGGATTGGCTTGCCGAAGGCAACCAGTCGGTTGTCGACAAGGGCGATGTCTTTGAAT
TCTTCGTACTGCCGGAAAGCGATTCAAAGCAGTTGACCGTTGCCGCACAGCAGGTCTGGCAGGAAGAGGCCGCGCGCTCC
GAGCGTAACGCAAAGCTGATCGAACTTCTGATCGAGAATGCCAAGGCCCAAGGGCGTCTCTGA

Upstream 100 bases:

>100_bases
TGTAGCGCGTCAAGCCCTGCCGAAAGGGCGCGGGAGGATGGCGCAAGCCCTGAACAAACACTCGTGAGCGCACCGCGTCT
CACTCTGGAGGAAGCAAGAA

Downstream 100 bases:

>100_bases
TGTCCCTCGTGACACGATACCTTCGGGTTCAAGATGGCCTGTCCGAGTTTGTCGGGCAGGTCATCTGCTGGCTCACCCTG
GTGATGATCGGGGTGCTGAT

Product: periplasmic solute-binding protein, putative

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; TRAP Dicarboxylate Transporter DctP Subunit; Transporter Periplasmic Component; TRAP Dicarboxylate Family Transporter DctP Subunit; TRAP Dicarboxylate Transporter-DctP Subunit; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; TRAP Mannitol/C4-Dicarboxylate Transporter; Periplasmic TRAP-Type Dicarboxylate Transporter Protein; Trap-T Transport System Periplasmic Component; C4-Dicarboxylate Transporter; TRAP Transporter; TRAP Dicarboxylate Transporter; TRAP Dicarboxylate Transporter- Dctp Subunit; Trap Dicarboxylate Transporter; Trap Dicarboxylate Family Transporter Dctp Subunit

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MNTKSITRRAAIAAVSGVIALTSYAAAAAADTTRLRMHTFYGTEIDPIIKAFRDRVRDESDGSLRINVFHGGELVASDQL
LSAVQSGSIDIAHGHGGYWSGQVDIGNIEAGLPGGWTSLEEANAFFASEPVASILNEAYSEAGVVFLGKGYGHDYDLLTK
EPIASLEDLKSLRIRATSNVAKVLESLEIPTVFLPAGELYIGMSTGVIDGAIYGGPIEYEQLKLNETAQYYTRLNMLMPG
WTETFLANEDKWASLSDEHKAILETALAQFAQDITDWLAEGNQSVVDKGDVFEFFVLPESDSKQLTVAAQQVWQEEAARS
ERNAKLIELLIENAKAQGRL

Sequences:

>Translated_340_residues
MNTKSITRRAAIAAVSGVIALTSYAAAAAADTTRLRMHTFYGTEIDPIIKAFRDRVRDESDGSLRINVFHGGELVASDQL
LSAVQSGSIDIAHGHGGYWSGQVDIGNIEAGLPGGWTSLEEANAFFASEPVASILNEAYSEAGVVFLGKGYGHDYDLLTK
EPIASLEDLKSLRIRATSNVAKVLESLEIPTVFLPAGELYIGMSTGVIDGAIYGGPIEYEQLKLNETAQYYTRLNMLMPG
WTETFLANEDKWASLSDEHKAILETALAQFAQDITDWLAEGNQSVVDKGDVFEFFVLPESDSKQLTVAAQQVWQEEAARS
ERNAKLIELLIENAKAQGRL
>Mature_340_residues
MNTKSITRRAAIAAVSGVIALTSYAAAAAADTTRLRMHTFYGTEIDPIIKAFRDRVRDESDGSLRINVFHGGELVASDQL
LSAVQSGSIDIAHGHGGYWSGQVDIGNIEAGLPGGWTSLEEANAFFASEPVASILNEAYSEAGVVFLGKGYGHDYDLLTK
EPIASLEDLKSLRIRATSNVAKVLESLEIPTVFLPAGELYIGMSTGVIDGAIYGGPIEYEQLKLNETAQYYTRLNMLMPG
WTETFLANEDKWASLSDEHKAILETALAQFAQDITDWLAEGNQSVVDKGDVFEFFVLPESDSKQLTVAAQQVWQEEAARS
ERNAKLIELLIENAKAQGRL

Specific function: Unknown

COG id: COG4663

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36982; Mature: 36982

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTKSITRRAAIAAVSGVIALTSYAAAAAADTTRLRMHTFYGTEIDPIIKAFRDRVRDES
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCC
DGSLRINVFHGGELVASDQLLSAVQSGSIDIAHGHGGYWSGQVDIGNIEAGLPGGWTSLE
CCEEEEEEEECCCEEEHHHHHHHHHCCCEEEEECCCCEEECEEEECCCCCCCCCCCCCHH
EANAFFASEPVASILNEAYSEAGVVFLGKGYGHDYDLLTKEPIASLEDLKSLRIRATSNV
HHCHHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AKVLESLEIPTVFLPAGELYIGMSTGVIDGAIYGGPIEYEQLKLNETAQYYTRLNMLMPG
HHHHHHCCCCEEEECCCCEEEEECCCCCCCCEECCCCCHHHEECCHHHHHHHHHHHCCCC
WTETFLANEDKWASLSDEHKAILETALAQFAQDITDWLAEGNQSVVDKGDVFEFFVLPES
CHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCC
DSKQLTVAAQQVWQEEAARSERNAKLIELLIENAKAQGRL
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNTKSITRRAAIAAVSGVIALTSYAAAAAADTTRLRMHTFYGTEIDPIIKAFRDRVRDES
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCC
DGSLRINVFHGGELVASDQLLSAVQSGSIDIAHGHGGYWSGQVDIGNIEAGLPGGWTSLE
CCEEEEEEEECCCEEEHHHHHHHHHCCCEEEEECCCCEEECEEEECCCCCCCCCCCCCHH
EANAFFASEPVASILNEAYSEAGVVFLGKGYGHDYDLLTKEPIASLEDLKSLRIRATSNV
HHCHHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AKVLESLEIPTVFLPAGELYIGMSTGVIDGAIYGGPIEYEQLKLNETAQYYTRLNMLMPG
HHHHHHCCCCEEEECCCCEEEEECCCCCCCCEECCCCCHHHEECCHHHHHHHHHHHCCCC
WTETFLANEDKWASLSDEHKAILETALAQFAQDITDWLAEGNQSVVDKGDVFEFFVLPES
CHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCC
DSKQLTVAAQQVWQEEAARSERNAKLIELLIENAKAQGRL
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA