| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is tenA
Identifier: 110678118
GI number: 110678118
Start: 726755
End: 727408
Strand: Direct
Name: tenA
Synonym: RD1_0755
Alternate gene names: NA
Gene position: 726755-727408 (Clockwise)
Preceding gene: 110678117
Following gene: 110678119
Centisome position: 17.58
GC content: 57.49
Gene sequence:
>654_bases ATGAGCGCAACAAAATATCTGCAATCACTTGTGGCGCAGGACTGGCACGCCGCCACGTATCATCCGTTCACCAATGCCTT GGCCGATGGGAGCCTGAGCCGTGAAAAGATGTCGGGATACTTGCAACAGGACTACCAATTCATCGAGGGGTTTGTGCGGC TTTTGGCATCCGCCGTGGCTCATGCGCCCACACTGCAAGACGCCGTGCCCGGCGCGCAGTTTCTGGGTGTGATCTGTGGC CCGGAAAACACCTATTTCCTGCGATCTGCACAGGCCTTGGAGATTTCGATGAGTGCGCCGGCAGCACCTGAGACGATCGC GTTTCAAAACCTGATGGATCAAGCCCGCCGCTCGGGCCGCTATGAGATTATGCTGTCGGTTCTCGTGGTTGCCGAATGGA TTTATCTCGATTGGGCCACCCCGGTTGAAGGCCGCGCAGACGATCTGCCGTTTTGGCTGGGGGAGTGGATATCCCTGCAT TCGGGCGATGGATTTGCGCAGGTCGTCGCCTATTTGCGCGATCAGCTGGATGTAATTTGGGAGACGCTTGACGATGACGC CCGCGAAGATGTCACTGCGACCTTCACTGAAGCGGTGCGTTTGGAGCGTGCGTTCTTTGACGCCTCATGGGCCGGCTTTG CGGTCGCAAAATGA
Upstream 100 bases:
>100_bases TCGAGGTCGCTGCCCCGCGCACCACCATTCCGCGCGACATCTACGCACCGGATGTCGTGCGCACGCAAACAGATCTGTTT GATCAACTTCGGAGGCCGAC
Downstream 100 bases:
>100_bases CCGGATGGCGGGCAGGCCTGGCGGCGACATGTCTGGTTTTGGTGCTCTGGCAGACGGTGATCTGGGCCACGGGTGTCGCC CGTTTCATCCTGCCGCCCCC
Product: transcriptional regulator, putative
Products: NA
Alternate protein names: Transcriptional Activator TenA Family; Transcriptional Regulator; TENA/THI-4 Family; TENA/THI-4 Family Protein; TenA Family Transcriptional Activator; Thiaminase; Transcription Regulator; Transcription Activator; TenA Protein; Transcriptional Activator TenA; Transcriptional Regulator TenA/THI-4 Family Protein; TenA Family Transcriptional Regulator; Tena/Thi-4 Family Domain-Containing Protein; Transcriptional Regulator Of Extracellular Genes
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSATKYLQSLVAQDWHAATYHPFTNALADGSLSREKMSGYLQQDYQFIEGFVRLLASAVAHAPTLQDAVPGAQFLGVICG PENTYFLRSAQALEISMSAPAAPETIAFQNLMDQARRSGRYEIMLSVLVVAEWIYLDWATPVEGRADDLPFWLGEWISLH SGDGFAQVVAYLRDQLDVIWETLDDDAREDVTATFTEAVRLERAFFDASWAGFAVAK
Sequences:
>Translated_217_residues MSATKYLQSLVAQDWHAATYHPFTNALADGSLSREKMSGYLQQDYQFIEGFVRLLASAVAHAPTLQDAVPGAQFLGVICG PENTYFLRSAQALEISMSAPAAPETIAFQNLMDQARRSGRYEIMLSVLVVAEWIYLDWATPVEGRADDLPFWLGEWISLH SGDGFAQVVAYLRDQLDVIWETLDDDAREDVTATFTEAVRLERAFFDASWAGFAVAK >Mature_216_residues SATKYLQSLVAQDWHAATYHPFTNALADGSLSREKMSGYLQQDYQFIEGFVRLLASAVAHAPTLQDAVPGAQFLGVICGP ENTYFLRSAQALEISMSAPAAPETIAFQNLMDQARRSGRYEIMLSVLVVAEWIYLDWATPVEGRADDLPFWLGEWISLHS GDGFAQVVAYLRDQLDVIWETLDDDAREDVTATFTEAVRLERAFFDASWAGFAVAK
Specific function: Unknown
COG id: COG0819
COG function: function code K; Putative transcription activator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6319866, Length=205, Percent_Identity=28.780487804878, Blast_Score=80, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24152; Mature: 24021
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATKYLQSLVAQDWHAATYHPFTNALADGSLSREKMSGYLQQDYQFIEGFVRLLASAVA CCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HAPTLQDAVPGAQFLGVICGPENTYFLRSAQALEISMSAPAAPETIAFQNLMDQARRSGR CCCCHHHHCCCHHHEEEEECCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCC YEIMLSVLVVAEWIYLDWATPVEGRADDLPFWLGEWISLHSGDGFAQVVAYLRDQLDVIW HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH ETLDDDAREDVTATFTEAVRLERAFFDASWAGFAVAK HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SATKYLQSLVAQDWHAATYHPFTNALADGSLSREKMSGYLQQDYQFIEGFVRLLASAVA CHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HAPTLQDAVPGAQFLGVICGPENTYFLRSAQALEISMSAPAAPETIAFQNLMDQARRSGR CCCCHHHHCCCHHHEEEEECCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCC YEIMLSVLVVAEWIYLDWATPVEGRADDLPFWLGEWISLHSGDGFAQVVAYLRDQLDVIW HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH ETLDDDAREDVTATFTEAVRLERAFFDASWAGFAVAK HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA