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The map label for this gene is livM [H]

Identifier: 110677926

GI number: 110677926

Start: 526037

End: 527017

Strand: Direct

Name: livM [H]

Synonym: RD1_0542

Alternate gene names: 110677926

Gene position: 526037-527017 (Clockwise)

Preceding gene: 110677925

Following gene: 110677927

Centisome position: 12.73

GC content: 59.12

Gene sequence:

>981_bases
ATGTCGGAACGGATGGTCAATAGCGTCGTGCTGATCGGCCTGTGCGCCGTGCCGATCTGGGCGCTGCTGGTGGATGAACC
CTTCACGATCACGCTGGCCACGCGCGCGGTGATCTTCGCGCTGGCGGCGGTTGGTCTGAACATCGCACTGGGCTGGGGTG
GTCTGGTCAGCCTCGGGCACGCGGTGTTCTTTGGTCTCGGGGGCTATGCGATGGGTATCCTTGCCCATCATGCGCAGACA
TTCACCCCCGTGATGGAATGGCCGTTCCTGATTGAGGGAACGAAATCCATGCCCGTGATCTGGCTGGTGGCGATGATCAG
CGCAGGTGTCGCGGCCCTCGTGATCGGGCTTTTGTCGCTGCGCACGGCGGGTGTCTATTTCATCATGATCACCCTCGCCT
TTGGGCAGATGTTCTACTATTTCGCTATTTCCTGGGCGGAATACGGCGGCGAGGATGGGCTGTCCATCTACGTCAGGAAC
GATTTTCCGGGGCTGAACACATTGGTGCCCATCCACTTTTTCGCCCTGTGTTTCGTGATCCTGTGCATTGTGCTTTTTAT
CAACGCGCGGCTGATCAAATCACCCTTTGGGCTTGCGCTGAACGCCGCGCGTCAGGTGCCGACCCGGGTTGAGACCGTGG
GGATGGACCCTGTACGCCTCAAGCTGGTCGCCTTTGTGATTTCCGGCGTGATCACGGGTCTGGCGGGCGCGCTTTTTGCC
GACCTCAACCGCTTTGTCAGCCCGACGATGTTCAGTTGGCAGATGTCCGGTGAGATCATGATTTTTGTCATTCTGGGCGG
CGTTGCCCGGCTTTTTGGCCCGGTGGTGGGGGCCGTCCTTTTCGTTGTTCTGGAACATTTCCTTGGGGGTCTGAGCAACT
ACTGGCACATCTATCTCGGGCTGCTGTTGCTGATCATCGTCTTGTTCGCCCGTGGTGGGATCATCGGTTTGTTGTGCGGG
CGGGGGCGGCTGCATGACTAA

Upstream 100 bases:

>100_bases
CCACGTCGGCGGGCTCGGCGCTGGCCTCCATGGCGATATACATCCTGATGGGGGCGGTGCTGATCTGGCGGCCTACCGGT
CTTTACGGGGCGCGCGCGTG

Downstream 100 bases:

>100_bases
CCCTGTGCTTGCCACCCATAACCTCAGCAAGAGTTTCGGCGCCTTGACCGCGACCGACGATGTCACGCTTGATCTGCGCG
CGGGTGAAATCCATGCGGTG

Product: branched-chain amino acid ABC transporter, permease protein, putative

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: LIV-I protein M [H]

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MSERMVNSVVLIGLCAVPIWALLVDEPFTITLATRAVIFALAAVGLNIALGWGGLVSLGHAVFFGLGGYAMGILAHHAQT
FTPVMEWPFLIEGTKSMPVIWLVAMISAGVAALVIGLLSLRTAGVYFIMITLAFGQMFYYFAISWAEYGGEDGLSIYVRN
DFPGLNTLVPIHFFALCFVILCIVLFINARLIKSPFGLALNAARQVPTRVETVGMDPVRLKLVAFVISGVITGLAGALFA
DLNRFVSPTMFSWQMSGEIMIFVILGGVARLFGPVVGAVLFVVLEHFLGGLSNYWHIYLGLLLLIIVLFARGGIIGLLCG
RGRLHD

Sequences:

>Translated_326_residues
MSERMVNSVVLIGLCAVPIWALLVDEPFTITLATRAVIFALAAVGLNIALGWGGLVSLGHAVFFGLGGYAMGILAHHAQT
FTPVMEWPFLIEGTKSMPVIWLVAMISAGVAALVIGLLSLRTAGVYFIMITLAFGQMFYYFAISWAEYGGEDGLSIYVRN
DFPGLNTLVPIHFFALCFVILCIVLFINARLIKSPFGLALNAARQVPTRVETVGMDPVRLKLVAFVISGVITGLAGALFA
DLNRFVSPTMFSWQMSGEIMIFVILGGVARLFGPVVGAVLFVVLEHFLGGLSNYWHIYLGLLLLIIVLFARGGIIGLLCG
RGRLHD
>Mature_325_residues
SERMVNSVVLIGLCAVPIWALLVDEPFTITLATRAVIFALAAVGLNIALGWGGLVSLGHAVFFGLGGYAMGILAHHAQTF
TPVMEWPFLIEGTKSMPVIWLVAMISAGVAALVIGLLSLRTAGVYFIMITLAFGQMFYYFAISWAEYGGEDGLSIYVRND
FPGLNTLVPIHFFALCFVILCIVLFINARLIKSPFGLALNAARQVPTRVETVGMDPVRLKLVAFVISGVITGLAGALFAD
LNRFVSPTMFSWQMSGEIMIFVILGGVARLFGPVVGAVLFVVLEHFLGGLSNYWHIYLGLLLLIIVLFARGGIIGLLCGR
GRLHD

Specific function: Part of the binding-protein-dependent transport system for branched-chain amino acids. Probably responsible for the translocation of the substrates across the membrane [H]

COG id: COG4177

COG function: function code E; ABC-type branched-chain amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789865, Length=332, Percent_Identity=26.8072289156627, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR021807 [H]

Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]

EC number: NA

Molecular weight: Translated: 35214; Mature: 35083

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERMVNSVVLIGLCAVPIWALLVDEPFTITLATRAVIFALAAVGLNIALGWGGLVSLGH
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHEECCHHHHHHHH
AVFFGLGGYAMGILAHHAQTFTPVMEWPFLIEGTKSMPVIWLVAMISAGVAALVIGLLSL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
RTAGVYFIMITLAFGQMFYYFAISWAEYGGEDGLSIYVRNDFPGLNTLVPIHFFALCFVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
LCIVLFINARLIKSPFGLALNAARQVPTRVETVGMDPVRLKLVAFVISGVITGLAGALFA
HHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DLNRFVSPTMFSWQMSGEIMIFVILGGVARLFGPVVGAVLFVVLEHFLGGLSNYWHIYLG
HHHHHHCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLLIIVLFARGGIIGLLCGRGRLHD
HHHHHHHHHHCCCEEEEEECCCCCCC
>Mature Secondary Structure 
SERMVNSVVLIGLCAVPIWALLVDEPFTITLATRAVIFALAAVGLNIALGWGGLVSLGH
CCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHEECCHHHHHHHH
AVFFGLGGYAMGILAHHAQTFTPVMEWPFLIEGTKSMPVIWLVAMISAGVAALVIGLLSL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
RTAGVYFIMITLAFGQMFYYFAISWAEYGGEDGLSIYVRNDFPGLNTLVPIHFFALCFVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
LCIVLFINARLIKSPFGLALNAARQVPTRVETVGMDPVRLKLVAFVISGVITGLAGALFA
HHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DLNRFVSPTMFSWQMSGEIMIFVILGGVARLFGPVVGAVLFVVLEHFLGGLSNYWHIYLG
HHHHHHCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLLIIVLFARGGIIGLLCGRGRLHD
HHHHHHHHHHCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2195019; 8041620; 9278503 [H]