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The map label for this gene is 110677882

Identifier: 110677882

GI number: 110677882

Start: 481757

End: 482263

Strand: Direct

Name: 110677882

Synonym: RD1_0496

Alternate gene names: NA

Gene position: 481757-482263 (Clockwise)

Preceding gene: 110677877

Following gene: 110677884

Centisome position: 11.66

GC content: 57.2

Gene sequence:

>507_bases
ATGGCACATTTGATTTCACGGCGCGGGGCGCTCAAGGCAGGGCTTGGATTTGCAGGGCTCGCAGGGCTATCGGCTTGCGG
TATGGCCACTGGCAGGACACCCGATATCGTGGATACTGCCGTGGCTGCCGGATCGTTCACAACGCTTGTTGCCGCAGTGC
AGGCCGCAGATCTTGTCGATACGTTGAAATCACCCGGTCCTTTCACCGTCTTTGCACCGACAGATGAGGCGTTCGCCGCT
TTGCCTGCGGGTACGGTCGAAGACCTTCTCCTCCCCGAGAACAAGGACAAGCTGGTTCAAATTCTGACTTATCATGTCGT
TGCAGGGCGTATTCCGGCTGCCAATATCGTTGGCAAACGCGGTTCGGTCACTACTGTCGAAGGCAGTGACCTGCACTATG
ACGGGCGCAACGGCGTCAAGATCAACAAGGCGACCGTGATCACGCCGGATGTGATGGCGTCCAACGGTATCATCCATGTC
ATCGACGGTGTTTTGCTGCCAAGCTGA

Upstream 100 bases:

>100_bases
TCCACAAGTTTATTGACTGATGGTTTGAGCGCGTTATCTATCCACGTGTGAAAAATACACACGAAAAGCTGAAAGCAGCG
GGAATGAAAGGAAACGACGA

Downstream 100 bases:

>100_bases
CGACAGCGTCATGCCTTAGACATCGGCATGACTTTGTGCGTGCGTTGCGTGGCCATTCTGCGCCATGCGGCGAGCCTGCG
CATCATAATCACCCTTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MAHLISRRGALKAGLGFAGLAGLSACGMATGRTPDIVDTAVAAGSFTTLVAAVQAADLVDTLKSPGPFTVFAPTDEAFAA
LPAGTVEDLLLPENKDKLVQILTYHVVAGRIPAANIVGKRGSVTTVEGSDLHYDGRNGVKINKATVITPDVMASNGIIHV
IDGVLLPS

Sequences:

>Translated_168_residues
MAHLISRRGALKAGLGFAGLAGLSACGMATGRTPDIVDTAVAAGSFTTLVAAVQAADLVDTLKSPGPFTVFAPTDEAFAA
LPAGTVEDLLLPENKDKLVQILTYHVVAGRIPAANIVGKRGSVTTVEGSDLHYDGRNGVKINKATVITPDVMASNGIIHV
IDGVLLPS
>Mature_167_residues
AHLISRRGALKAGLGFAGLAGLSACGMATGRTPDIVDTAVAAGSFTTLVAAVQAADLVDTLKSPGPFTVFAPTDEAFAAL
PAGTVEDLLLPENKDKLVQILTYHVVAGRIPAANIVGKRGSVTTVEGSDLHYDGRNGVKINKATVITPDVMASNGIIHVI
DGVLLPS

Specific function: Unknown

COG id: COG2335

COG function: function code M; Secreted and surface protein containing fasciclin-like repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAS1 domain [H]

Homologues:

Organism=Homo sapiens, GI4507467, Length=133, Percent_Identity=39.0977443609023, Blast_Score=87, Evalue=5e-18,
Organism=Homo sapiens, GI209862911, Length=125, Percent_Identity=31.2, Blast_Score=67, Evalue=7e-12,
Organism=Homo sapiens, GI209863011, Length=125, Percent_Identity=31.2, Blast_Score=67, Evalue=7e-12,
Organism=Homo sapiens, GI209863034, Length=125, Percent_Identity=31.2, Blast_Score=67, Evalue=7e-12,
Organism=Homo sapiens, GI209862907, Length=125, Percent_Identity=31.2, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI28574452, Length=126, Percent_Identity=31.7460317460317, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000782 [H]

Pfam domain/function: PF02469 Fasciclin [H]

EC number: NA

Molecular weight: Translated: 17128; Mature: 16997

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50213 FAS1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHLISRRGALKAGLGFAGLAGLSACGMATGRTPDIVDTAVAAGSFTTLVAAVQAADLVD
CCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHH
TLKSPGPFTVFAPTDEAFAALPAGTVEDLLLPENKDKLVQILTYHVVAGRIPAANIVGKR
HHCCCCCEEEECCCCHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCC
GSVTTVEGSDLHYDGRNGVKINKATVITPDVMASNGIIHVIDGVLLPS
CCEEEEECCCEEECCCCCEEECCEEEECCHHHHCCCEEEEECCEECCC
>Mature Secondary Structure 
AHLISRRGALKAGLGFAGLAGLSACGMATGRTPDIVDTAVAAGSFTTLVAAVQAADLVD
CCCCCCCCCHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHH
TLKSPGPFTVFAPTDEAFAALPAGTVEDLLLPENKDKLVQILTYHVVAGRIPAANIVGKR
HHCCCCCEEEECCCCHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCC
GSVTTVEGSDLHYDGRNGVKINKATVITPDVMASNGIIHVIDGVLLPS
CCEEEEECCCEEECCCCCEEECCEEEECCHHHHCCCEEEEECCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]