| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110677743
Identifier: 110677743
GI number: 110677743
Start: 334092
End: 334430
Strand: Direct
Name: 110677743
Synonym: RD1_0341
Alternate gene names: NA
Gene position: 334092-334430 (Clockwise)
Preceding gene: 110677742
Following gene: 110677744
Centisome position: 8.08
GC content: 56.34
Gene sequence:
>339_bases ATGCCGGAAGTCATCATATCCATCCCGATGTCGGACGAGGAAGCACAGAAAACAGTCGGCAAGCAGATCATGGTTTTGTT TGTGTCGGATGATCAGCGCGCGGCGATAAGCGCCACCATGGGTCAGACCCATGAGTTTCTGAGCCTCACACATCAGAACC TTAACACACTGGGCGAAATCGCGGAAACCCGTGGCGCCGGCGAAACGGACCTGACCAAAACCATCGGACAGTTGCGCGAC CCGTCCCGCAAGGTGCTGGGCGCGTTCGAGGGGCTCATGAAGTTTTTAGGACAGGCGCATTTCATCAAGCCCGGATCGAA CGGGGAGAGACTGCAATGA
Upstream 100 bases:
>100_bases CGATTGCACAGGCCTACCGCATGGCGGGAACGCTGTCGGGTGCAGCACCGGTATCCGCTCAGAACGTTCGGGACGCGATT AAAATGATGGAGGGTGTGTA
Downstream 100 bases:
>100_bases ACGTATCCACACACCACGTTGCAGTTGCCGTTCCCGCCGATAAGCTTGCTGCGCTCTATGATGCGATGAACGAAAGCCCT TACTATCTTGTGCGTGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MPEVIISIPMSDEEAQKTVGKQIMVLFVSDDQRAAISATMGQTHEFLSLTHQNLNTLGEIAETRGAGETDLTKTIGQLRD PSRKVLGAFEGLMKFLGQAHFIKPGSNGERLQ
Sequences:
>Translated_112_residues MPEVIISIPMSDEEAQKTVGKQIMVLFVSDDQRAAISATMGQTHEFLSLTHQNLNTLGEIAETRGAGETDLTKTIGQLRD PSRKVLGAFEGLMKFLGQAHFIKPGSNGERLQ >Mature_111_residues PEVIISIPMSDEEAQKTVGKQIMVLFVSDDQRAAISATMGQTHEFLSLTHQNLNTLGEIAETRGAGETDLTKTIGQLRDP SRKVLGAFEGLMKFLGQAHFIKPGSNGERLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12226; Mature: 12095
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEVIISIPMSDEEAQKTVGKQIMVLFVSDDQRAAISATMGQTHEFLSLTHQNLNTLGEI CCCEEEECCCCCHHHHHHHCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH AETRGAGETDLTKTIGQLRDPSRKVLGAFEGLMKFLGQAHFIKPGSNGERLQ HHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC >Mature Secondary Structure PEVIISIPMSDEEAQKTVGKQIMVLFVSDDQRAAISATMGQTHEFLSLTHQNLNTLGEI CCEEEECCCCCHHHHHHHCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH AETRGAGETDLTKTIGQLRDPSRKVLGAFEGLMKFLGQAHFIKPGSNGERLQ HHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA