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The map label for this gene is motA [H]

Identifier: 110677677

GI number: 110677677

Start: 264805

End: 265674

Strand: Direct

Name: motA [H]

Synonym: RD1_0273

Alternate gene names: 110677677

Gene position: 264805-265674 (Clockwise)

Preceding gene: 110677676

Following gene: 110677678

Centisome position: 6.41

GC content: 51.03

Gene sequence:

>870_bases
ATGATCGGAATCATCGGCATAATCACCGTATTTGCAATGGTCTTTGGCGGCTACCTGGCTGCCGGGGGCAAGATGGGTAT
CATCTTCAAGGCTCTACCATTCGAAATGACAATGATTGGTGGAGCGGCTGTCGGTGCGTTCCTCATCAGTAACGACATGT
CAGCGATCAAGCACACGATGCGTGACCTCGGTCGCGTCTTCAAGGGGCCGAAGTGGTCCCATGAAGACTACAAGGATCTC
CTATGCCTATTGTTCGAGCTGATACGGCTGGCGCGCCAAAATCCGGTCGCGATCGAAGAACACATTGAAGCGCCAGAAGA
ATCCTCAATTTTTTCAAAGTACGAGAAAATTCTAAAGGACAAGGAAGCAGTGGCCCTGATTTGTGACACCCTTCGCTCTG
CGTCAATGAATTACGATGACCCGCATCAAGTGGAAGAAGTTCTCGAAAAACGTATGGAAGCAAACATGCACCATGCGATG
CACTCCAGTCATGCTTTGCAAACGGTGGCCGACGGGCTTCCTGCTCTCGGTATTGTTGCTGCTGTTCTCGGAATCATTAA
GACGATGGGCTCGATTGACCAACCGCCAGAGGTATTGGGTAAACTTATCGGTGGTGCTCTTGTTGGCACGTTCCTCGGGG
TGTTCTTGGCATATGGCTTCGTAGGACCGTTTGCTGCGAAAGTAAAAAGCGTTACCGAAGAAGACGGTCACTTCTACCAG
CTCATTAGGGAGGTCTTGGTCGCGAATTTGCATGCACATGCAACGAACATTTGTATTGAAGTCGGTCGCCAAAACACGCC
ATCGCACCATCGCCCGAGCTTTGCGGAGTTGGAAGAGGCACTGAAATCCGTCAAGCAGAACGCGGCATGA

Upstream 100 bases:

>100_bases
TGCAGGAAGAAATGCAGAGGCGCCAAAAGGCTGACTCTCGTGAAGGTTTTTTAACCTCCTTTTGCAAATATACCGACGTA
ACGATTTTTTGGGGAACGGC

Downstream 100 bases:

>100_bases
GAAAGCTCACACTTCTGATTTTTGTGGCGGTTCTATTTCCGCTACGATTGATGGCAGAGCCAATCGTAGTTCGCTCTGGC
GAACACAACACATTTACGCG

Product: flagellar motor protein MotA

Products: NA

Alternate protein names: Chemotaxis protein MotA [H]

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MIGIIGIITVFAMVFGGYLAAGGKMGIIFKALPFEMTMIGGAAVGAFLISNDMSAIKHTMRDLGRVFKGPKWSHEDYKDL
LCLLFELIRLARQNPVAIEEHIEAPEESSIFSKYEKILKDKEAVALICDTLRSASMNYDDPHQVEEVLEKRMEANMHHAM
HSSHALQTVADGLPALGIVAAVLGIIKTMGSIDQPPEVLGKLIGGALVGTFLGVFLAYGFVGPFAAKVKSVTEEDGHFYQ
LIREVLVANLHAHATNICIEVGRQNTPSHHRPSFAELEEALKSVKQNAA

Sequences:

>Translated_289_residues
MIGIIGIITVFAMVFGGYLAAGGKMGIIFKALPFEMTMIGGAAVGAFLISNDMSAIKHTMRDLGRVFKGPKWSHEDYKDL
LCLLFELIRLARQNPVAIEEHIEAPEESSIFSKYEKILKDKEAVALICDTLRSASMNYDDPHQVEEVLEKRMEANMHHAM
HSSHALQTVADGLPALGIVAAVLGIIKTMGSIDQPPEVLGKLIGGALVGTFLGVFLAYGFVGPFAAKVKSVTEEDGHFYQ
LIREVLVANLHAHATNICIEVGRQNTPSHHRPSFAELEEALKSVKQNAA
>Mature_289_residues
MIGIIGIITVFAMVFGGYLAAGGKMGIIFKALPFEMTMIGGAAVGAFLISNDMSAIKHTMRDLGRVFKGPKWSHEDYKDL
LCLLFELIRLARQNPVAIEEHIEAPEESSIFSKYEKILKDKEAVALICDTLRSASMNYDDPHQVEEVLEKRMEANMHHAM
HSSHALQTVADGLPALGIVAAVLGIIKTMGSIDQPPEVLGKLIGGALVGTFLGVFLAYGFVGPFAAKVKSVTEEDGHFYQ
LIREVLVANLHAHATNICIEVGRQNTPSHHRPSFAELEEALKSVKQNAA

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for rotation of the flagellar motor. Probable transmembrane proton channel [H]

COG id: COG1291

COG function: function code N; Flagellar motor component

Gene ontology:

Cell location: Cell inner membrane; Multi- pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MotA family [H]

Homologues:

Organism=Escherichia coli, GI1788199, Length=287, Percent_Identity=38.6759581881533, Blast_Score=216, Evalue=1e-57,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000540
- InterPro:   IPR022522
- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 31464; Mature: 31464

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: PS01307 MOTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGIIGIITVFAMVFGGYLAAGGKMGIIFKALPFEMTMIGGAAVGAFLISNDMSAIKHTM
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
RDLGRVFKGPKWSHEDYKDLLCLLFELIRLARQNPVAIEEHIEAPEESSIFSKYEKILKD
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHH
KEAVALICDTLRSASMNYDDPHQVEEVLEKRMEANMHHAMHSSHALQTVADGLPALGIVA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AVLGIIKTMGSIDQPPEVLGKLIGGALVGTFLGVFLAYGFVGPFAAKVKSVTEEDGHFYQ
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LIREVLVANLHAHATNICIEVGRQNTPSHHRPSFAELEEALKSVKQNAA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIGIIGIITVFAMVFGGYLAAGGKMGIIFKALPFEMTMIGGAAVGAFLISNDMSAIKHTM
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
RDLGRVFKGPKWSHEDYKDLLCLLFELIRLARQNPVAIEEHIEAPEESSIFSKYEKILKD
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHH
KEAVALICDTLRSASMNYDDPHQVEEVLEKRMEANMHHAMHSSHALQTVADGLPALGIVA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AVLGIIKTMGSIDQPPEVLGKLIGGALVGTFLGVFLAYGFVGPFAAKVKSVTEEDGHFYQ
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LIREVLVANLHAHATNICIEVGRQNTPSHHRPSFAELEEALKSVKQNAA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9161425; 11743193; 11743194 [H]