| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is fliL
Identifier: 110677674
GI number: 110677674
Start: 263263
End: 263754
Strand: Direct
Name: fliL
Synonym: RD1_0270
Alternate gene names: NA
Gene position: 263263-263754 (Clockwise)
Preceding gene: 110677669
Following gene: 110677675
Centisome position: 6.37
GC content: 51.42
Gene sequence:
>492_bases ATGACTGACGCAACCAATGAAGAAAGCGCAGAAGCGCCAAAATCGGGCAAGTTGCCTTTAATCGTTGGCGCTGTTCTGGC GATTATCGGCGGCGGCGGTGGGTTTTACGCTGCCAGCAGCGGGATGATCTTTGCAACCGAATCAAAGAAGGAAACGGTGG AAGAAGAAAAGGAAACTTCCAACGAGTTCAGCGATATTTCGTTTTTGCCACTGGAACCAATGACGATATCCATGCCGCGT GACAGCGCCTACAAACACCTGCGTTTTCGCGGTGAGCTTGAAGTGCCCAAGGAGTATGCGGAAGATATCAAGAAGGTCAC GCCACGCATCATAGATGTGTTGAATGGCTATCTGCGCGCCCTGCAGGTTGCAGATATCGAAGAACCCGCATCGCTGACAA GGCTGAGATCGCAAATGCTGCGCCGCATTCAGATCGTTGCGGGTCCTGGACGCGTGAATGACCTGCTGATCATGGAATTT GTTTTAAACTGA
Upstream 100 bases:
>100_bases TTTCTGTTCAACGGTGACATCAGCAATGAACCATCTGCCTTAACAATCGGTTAGTGCAAATGCGTCTATAACAAGTTTCG TAAACATTGACGGGACGAAT
Downstream 100 bases:
>100_bases GGAGAGCGATATGGACGTTATTGCTGACATCTTTCTGGCTGCCGGAGCGTTTGGTGCCGGTATCTACTGCTACATTTTGG GCAGGCGCCTAAACAAATTC
Product: flagellar basal body-associated protein FliL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MTDATNEESAEAPKSGKLPLIVGAVLAIIGGGGGFYAASSGMIFATESKKETVEEEKETSNEFSDISFLPLEPMTISMPR DSAYKHLRFRGELEVPKEYAEDIKKVTPRIIDVLNGYLRALQVADIEEPASLTRLRSQMLRRIQIVAGPGRVNDLLIMEF VLN
Sequences:
>Translated_163_residues MTDATNEESAEAPKSGKLPLIVGAVLAIIGGGGGFYAASSGMIFATESKKETVEEEKETSNEFSDISFLPLEPMTISMPR DSAYKHLRFRGELEVPKEYAEDIKKVTPRIIDVLNGYLRALQVADIEEPASLTRLRSQMLRRIQIVAGPGRVNDLLIMEF VLN >Mature_162_residues TDATNEESAEAPKSGKLPLIVGAVLAIIGGGGGFYAASSGMIFATESKKETVEEEKETSNEFSDISFLPLEPMTISMPRD SAYKHLRFRGELEVPKEYAEDIKKVTPRIIDVLNGYLRALQVADIEEPASLTRLRSQMLRRIQIVAGPGRVNDLLIMEFV LN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17959; Mature: 17828
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDATNEESAEAPKSGKLPLIVGAVLAIIGGGGGFYAASSGMIFATESKKETVEEEKETS CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCEEEEECCHHHHHHHHHHHC NEFSDISFLPLEPMTISMPRDSAYKHLRFRGELEVPKEYAEDIKKVTPRIIDVLNGYLRA CCCCCEEECCCCCEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LQVADIEEPASLTRLRSQMLRRIQIVAGPGRVNDLLIMEFVLN HHHHCCCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCC >Mature Secondary Structure TDATNEESAEAPKSGKLPLIVGAVLAIIGGGGGFYAASSGMIFATESKKETVEEEKETS CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCEEEEECCHHHHHHHHHHHC NEFSDISFLPLEPMTISMPRDSAYKHLRFRGELEVPKEYAEDIKKVTPRIIDVLNGYLRA CCCCCEEECCCCCEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LQVADIEEPASLTRLRSQMLRRIQIVAGPGRVNDLLIMEFVLN HHHHCCCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA