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The map label for this gene is fliR [H]

Identifier: 110677563

GI number: 110677563

Start: 151614

End: 152384

Strand: Direct

Name: fliR [H]

Synonym: RD1_0150

Alternate gene names: 110677563

Gene position: 151614-152384 (Clockwise)

Preceding gene: 110677562

Following gene: 110677564

Centisome position: 3.67

GC content: 57.72

Gene sequence:

>771_bases
GTGATCGCACTGCAGGAGTTCTTTCCATTCCTGAACTCGGCCATTTGGCATGGCTTTGTCGTGTTTTGTCGCGTGGCCGC
TTTGGCCGCTGTTTTACCCGCCTTTGGCGAGCAGACACTTTCCGCCCGCGTCAAACTCGCTGCGGCTCTGGCATTCACTG
TGATCGTGGCACCGGCCTTGCCGATCATCCCTGCGCCGGGATCGATTGGCGCGGTGTCATTTGTCATTCTCACCGAAGTG
GTTGCCGGGCTGGCGATCGGTATTGGTCTGCGTCTCTTCGTACTCGCATTACAAACCGCCGGGTCGATCGCGGCGCAATC
GACCTCCCTATCGCAGGTTCTCGGAGGGGCCGCAGTCGATCCCCTGCCAGCAATGGGGTATATTCTTGTCATCGCCGGTT
TGGCACTGGCGGTCATGGCCGGCCTACATGTCAAAGTCGCCCAGCTGATCATATTATCATATGATTTCATGCCTGTCGGG
CGTTTCGCCAATGCCGCCGACCTCTCGGAATGGGGGACAAGCCAGGTTGCGCATGCCTTTTCCCTGGCCTTCACCCTGGC
CGCGCCATTCGTCATACTGTCAGTCCTTTACAATTTTGCGCTGGGTGCAATTAACAGGGCGATGCCGCAGCTCATGGTCG
CTTTCGTCGGTGCCCCGGTGATTACTCTGGGTGGGTTGGCGCTCTTACTGATTTCAGCGCCATATATGCTGACCGTCTGG
TTGGGCGCGATGGATCGCTATCTGGCAGATCCTTTCGGAGTATTACCGTGA

Upstream 100 bases:

>100_bases
TGAAGACAGTCATGCGCGCCAAAGGCATCAACAATCCCGTTTTCTCATTTGAAGAAATCGGACTGGATGCGCGCCCCTCT
TTGGTTGGAGTCGTCGCCCA

Downstream 100 bases:

>100_bases
GCGCGCCTGACGAAGAGGCAGACAAGTCTTTTGAGGCGACACCACAGAAACTGCTGGAGGCGCGAAAAAAAGGCGAAATT
GCGCGTTCGACTGAACTTCT

Product: flagellar biosynthetic protein FliR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MIALQEFFPFLNSAIWHGFVVFCRVAALAAVLPAFGEQTLSARVKLAAALAFTVIVAPALPIIPAPGSIGAVSFVILTEV
VAGLAIGIGLRLFVLALQTAGSIAAQSTSLSQVLGGAAVDPLPAMGYILVIAGLALAVMAGLHVKVAQLIILSYDFMPVG
RFANAADLSEWGTSQVAHAFSLAFTLAAPFVILSVLYNFALGAINRAMPQLMVAFVGAPVITLGGLALLLISAPYMLTVW
LGAMDRYLADPFGVLP

Sequences:

>Translated_256_residues
MIALQEFFPFLNSAIWHGFVVFCRVAALAAVLPAFGEQTLSARVKLAAALAFTVIVAPALPIIPAPGSIGAVSFVILTEV
VAGLAIGIGLRLFVLALQTAGSIAAQSTSLSQVLGGAAVDPLPAMGYILVIAGLALAVMAGLHVKVAQLIILSYDFMPVG
RFANAADLSEWGTSQVAHAFSLAFTLAAPFVILSVLYNFALGAINRAMPQLMVAFVGAPVITLGGLALLLISAPYMLTVW
LGAMDRYLADPFGVLP
>Mature_256_residues
MIALQEFFPFLNSAIWHGFVVFCRVAALAAVLPAFGEQTLSARVKLAAALAFTVIVAPALPIIPAPGSIGAVSFVILTEV
VAGLAIGIGLRLFVLALQTAGSIAAQSTSLSQVLGGAAVDPLPAMGYILVIAGLALAVMAGLHVKVAQLIILSYDFMPVG
RFANAADLSEWGTSQVAHAFSLAFTLAAPFVILSVLYNFALGAINRAMPQLMVAFVGAPVITLGGLALLLISAPYMLTVW
LGAMDRYLADPFGVLP

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 26477; Mature: 26477

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCCCCCCC
>Mature Secondary Structure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HHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7814323; 11259647 [H]