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The map label for this gene is ppa

Identifier: 110677555

GI number: 110677555

Start: 142189

End: 142971

Strand: Direct

Name: ppa

Synonym: RD1_0142

Alternate gene names: NA

Gene position: 142189-142971 (Clockwise)

Preceding gene: 110677538

Following gene: 110677556

Centisome position: 3.44

GC content: 56.58

Gene sequence:

>783_bases
ATGTCGACGGATGATCAAACAGACCCGCGTGGCGTAATGCGCAACCGGCCCGACAGTGTGGATGTTTTGGCATCGACAGT
CATCTCCGTGCTGCGTGACCGGCAAGCTGTGTCCTGTGAGGGATTGCGCCAGTTCGTGCTGGACCAGATATCGTCGCGGG
TTCTGAGCAAGAAACACTTTGCACCCGATGTTGTGCTGGCAGAACTGCGCGGCTATCGTCTGTCGGTGGATGCCATCATT
GATCTCTATGTCCCAGCCGCCGCCCGCATGCTGGGTGAGCAATGGGTCGATGACAAAATCAGTTTTGCCGATGTGACAAT
CGGAACGATGCGCTTGCAAGCGCTGCTGGCCGATGCCTCCGGAGCAAGCTGCGTTGACCACAAGGTCGGTGCGGTGCGGC
TGAACGCCCTCGTGGTGATCCCCCAGAATGAACAGCATTTTCTCGGCGCCAGCGTTGTGGCTGCGCAATTGCGCCGTTTG
GGCTGCGAAGTCGCAATGTCCTATGACGAGGATCACGGTGCCCTGACGGCCCGCCTGATCAACGATGTTCCCGACCTCGT
GCTGGTCACATGTGGCCGCCTTGAAACCCTGCCAAGTGTTGCCAATACAATACAGGTTGTGCGGAAAGCTGTCGGAAACG
ATCCAACGCTTGCAGTTGGTGGGGCTTGTCAGGTCAATAAACAGCGCGTGATGGAAATAACAGGTGCTGATATCGTGACC
AGTGTTGCAGAAGAAGCTGTGGCGCACTGCCTGAAATACGTCAATTCACCAAGCACTTCATGA

Upstream 100 bases:

>100_bases
GACATTTTGCTGCCAAGGGTAGACCTTTTGTATATATATCGACTCTGCGGGGGCCCCTGCCCTCGCGATGCAAAAGGTGA
AGGGTCGTTAGGAAAGAGCC

Downstream 100 bases:

>100_bases
CAACCGGCGGAAATACCTTCTGGTCCAGTGGGGCAGTACCGCTGATCGAACCCGAGTTTCTGAGCAGTATTATCGCCGCT
GCGTCGGACATTGCGCTGGT

Product: regulatory protein Ppa

Products: NA

Alternate protein names: ORF192 [H]

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MSTDDQTDPRGVMRNRPDSVDVLASTVISVLRDRQAVSCEGLRQFVLDQISSRVLSKKHFAPDVVLAELRGYRLSVDAII
DLYVPAAARMLGEQWVDDKISFADVTIGTMRLQALLADASGASCVDHKVGAVRLNALVVIPQNEQHFLGASVVAAQLRRL
GCEVAMSYDEDHGALTARLINDVPDLVLVTCGRLETLPSVANTIQVVRKAVGNDPTLAVGGACQVNKQRVMEITGADIVT
SVAEEAVAHCLKYVNSPSTS

Sequences:

>Translated_260_residues
MSTDDQTDPRGVMRNRPDSVDVLASTVISVLRDRQAVSCEGLRQFVLDQISSRVLSKKHFAPDVVLAELRGYRLSVDAII
DLYVPAAARMLGEQWVDDKISFADVTIGTMRLQALLADASGASCVDHKVGAVRLNALVVIPQNEQHFLGASVVAAQLRRL
GCEVAMSYDEDHGALTARLINDVPDLVLVTCGRLETLPSVANTIQVVRKAVGNDPTLAVGGACQVNKQRVMEITGADIVT
SVAEEAVAHCLKYVNSPSTS
>Mature_259_residues
STDDQTDPRGVMRNRPDSVDVLASTVISVLRDRQAVSCEGLRQFVLDQISSRVLSKKHFAPDVVLAELRGYRLSVDAIID
LYVPAAARMLGEQWVDDKISFADVTIGTMRLQALLADASGASCVDHKVGAVRLNALVVIPQNEQHFLGASVVAAQLRRLG
CEVAMSYDEDHGALTARLINDVPDLVLVTCGRLETLPSVANTIQVVRKAVGNDPTLAVGGACQVNKQRVMEITGADIVTS
VAEEAVAHCLKYVNSPSTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158 [H]

Pfam domain/function: PF02310 B12-binding [H]

EC number: NA

Molecular weight: Translated: 27920; Mature: 27789

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDDQTDPRGVMRNRPDSVDVLASTVISVLRDRQAVSCEGLRQFVLDQISSRVLSKKHF
CCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
APDVVLAELRGYRLSVDAIIDLYVPAAARMLGEQWVDDKISFADVTIGTMRLQALLADAS
CHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
GASCVDHKVGAVRLNALVVIPQNEQHFLGASVVAAQLRRLGCEVAMSYDEDHGALTARLI
CCCHHHHCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCHHHEECCCCCCHHHHHHHH
NDVPDLVLVTCGRLETLPSVANTIQVVRKAVGNDPTLAVGGACQVNKQRVMEITGADIVT
HCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHCCHHHHH
SVAEEAVAHCLKYVNSPSTS
HHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
STDDQTDPRGVMRNRPDSVDVLASTVISVLRDRQAVSCEGLRQFVLDQISSRVLSKKHF
CCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
APDVVLAELRGYRLSVDAIIDLYVPAAARMLGEQWVDDKISFADVTIGTMRLQALLADAS
CHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
GASCVDHKVGAVRLNALVVIPQNEQHFLGASVVAAQLRRLGCEVAMSYDEDHGALTARLI
CCCHHHHCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCHHHEECCCCCCHHHHHHHH
NDVPDLVLVTCGRLETLPSVANTIQVVRKAVGNDPTLAVGGACQVNKQRVMEITGADIVT
HCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHCCHHHHH
SVAEEAVAHCLKYVNSPSTS
HHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA