| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is crtA [H]
Identifier: 110677535
GI number: 110677535
Start: 121082
End: 121798
Strand: Direct
Name: crtA [H]
Synonym: RD1_0121
Alternate gene names: 110677535
Gene position: 121082-121798 (Clockwise)
Preceding gene: 110677531
Following gene: 110677536
Centisome position: 2.93
GC content: 59.83
Gene sequence:
>717_bases ATGACCGAAAGACCCGTTGTAAGCATTAGCTTTTTCCGCTTTTCGCGGATTCCTGCCCGAATTTGGGCGCTTTACATGAT GGGGCGGGCGCGCCTGTCCCTGCCATCGGTTCCGGGAATCGGTTTCTGGAAACTCTGCGGATCGGGCAGCGGTGAGGGTT TCACCCCCCTGCCCAACACCGCCGTGTTCGCAATCCTCGCCACTTGGCCGGATGAGCAAACGGCCCGCCAGCAAATTGAC ACTGCCCCGATCTTTGCCAAATACCACCGCAAAGCATCGGAAAGCTGGACGATTTTCCTTGAAACCGCCTCAGTGCGCGG GGTTTGGTCCGGGGACACGCCGTTCCACCCGACGGGTCAGAAAATCACGGGTCCGCTTGCCGCCTTGACCCGCGCCACTG TCAAACCCTCCCTTGCGCTCAAGTTCTGGCGACGCGTGCCCGACATCAGCCAGATGATCGGCAGCGATGAGAACGTCGCC TTCAAGATCGGCATCGGAGAGGTGCCACTGCTGCATCAGGTCACCTTTTCGCTCTGGCCGGACGCCAATGCGATGGCCGC CTTTGCCCGTATGAACGGACCCCATGCCGCCGCCATCCGGGCAGTGCGCGACGAAGACTGGTTTGCCGAAGAACTCTACG CCCGTTTCGCCATATTGGGCGATACAGGCTCCTGGGAGGGCGCAAGCCCTCTTGAAAAATTGGAATTACATGCATGA
Upstream 100 bases:
>100_bases CACAGTAGATGTGTCTAGTTGACTTGACAATTGTGATCTTCCATTTTGCGCAAATTGGTGTCAGACTAAGTTGACACTCA CGAAAGAACCCGTGCGCGAA
Downstream 100 bases:
>100_bases AGACCCCCTTCCCTTTCTCCGCCATCGTTGGTCAGCGCGAAATGAAACAGGCCATGGTGCTCACCGCCGTGGACCCCGGT ATCGGCGGCGTGCTGGTCTT
Product: spheroidene monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MTERPVVSISFFRFSRIPARIWALYMMGRARLSLPSVPGIGFWKLCGSGSGEGFTPLPNTAVFAILATWPDEQTARQQID TAPIFAKYHRKASESWTIFLETASVRGVWSGDTPFHPTGQKITGPLAALTRATVKPSLALKFWRRVPDISQMIGSDENVA FKIGIGEVPLLHQVTFSLWPDANAMAAFARMNGPHAAAIRAVRDEDWFAEELYARFAILGDTGSWEGASPLEKLELHA
Sequences:
>Translated_238_residues MTERPVVSISFFRFSRIPARIWALYMMGRARLSLPSVPGIGFWKLCGSGSGEGFTPLPNTAVFAILATWPDEQTARQQID TAPIFAKYHRKASESWTIFLETASVRGVWSGDTPFHPTGQKITGPLAALTRATVKPSLALKFWRRVPDISQMIGSDENVA FKIGIGEVPLLHQVTFSLWPDANAMAAFARMNGPHAAAIRAVRDEDWFAEELYARFAILGDTGSWEGASPLEKLELHA >Mature_237_residues TERPVVSISFFRFSRIPARIWALYMMGRARLSLPSVPGIGFWKLCGSGSGEGFTPLPNTAVFAILATWPDEQTARQQIDT APIFAKYHRKASESWTIFLETASVRGVWSGDTPFHPTGQKITGPLAALTRATVKPSLALKFWRRVPDISQMIGSDENVAF KIGIGEVPLLHQVTFSLWPDANAMAAFARMNGPHAAAIRAVRDEDWFAEELYARFAILGDTGSWEGASPLEKLELHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26275; Mature: 26144
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTERPVVSISFFRFSRIPARIWALYMMGRARLSLPSVPGIGFWKLCGSGSGEGFTPLPNT CCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCC AVFAILATWPDEQTARQQIDTAPIFAKYHRKASESWTIFLETASVRGVWSGDTPFHPTGQ EEEEEEEECCCHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCCCEEECCCCCCCCCCC KITGPLAALTRATVKPSLALKFWRRVPDISQMIGSDENVAFKIGIGEVPLLHQVTFSLWP CHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCC DANAMAAFARMNGPHAAAIRAVRDEDWFAEELYARFAILGDTGSWEGASPLEKLELHA CCHHHHHHHHCCCCHHHHHEECCCCCHHHHHHHHHEEEECCCCCCCCCCCHHHHCCCC >Mature Secondary Structure TERPVVSISFFRFSRIPARIWALYMMGRARLSLPSVPGIGFWKLCGSGSGEGFTPLPNT CCCCEEEEEHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCC AVFAILATWPDEQTARQQIDTAPIFAKYHRKASESWTIFLETASVRGVWSGDTPFHPTGQ EEEEEEEECCCHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCCCEEECCCCCCCCCCC KITGPLAALTRATVKPSLALKFWRRVPDISQMIGSDENVAFKIGIGEVPLLHQVTFSLWP CHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCC DANAMAAFARMNGPHAAAIRAVRDEDWFAEELYARFAILGDTGSWEGASPLEKLELHA CCHHHHHHHHCCCCHHHHHEECCCCCHHHHHHHHHEEEECCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2747617 [H]