| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110635995
Identifier: 110635995
GI number: 110635995
Start: 3959446
End: 3960153
Strand: Reverse
Name: 110635995
Synonym: Meso_3670
Alternate gene names: NA
Gene position: 3960153-3959446 (Counterclockwise)
Preceding gene: 110636007
Following gene: 110635994
Centisome position: 89.75
GC content: 59.04
Gene sequence:
>708_bases TTGAACAGCATCGCCAAGGCGGAAACCAGCGGCATCGCCGCGCAGGCAGTTAAACGCAGCGAACGCGGAGCGGAGGCTTT TGCCCGTGCCGCCCGTCACTCCCGCCGCGTCCGTGTGCTCAAATTTGTGTTGCCGGCGGTAGCGGTGGCGATCTCCGGCC TGTTTCTGGGCTATTCCCTTATTGCGCCGACCGGAATTCATGCACTAAATCTCGATTCAGCGACGATCGAGGGCGGCAGC CTGGTGATGCACAATCCTTCCCTCAATGGCTTCACCAGCGGAAACCTTCCCTACAGCGTTACCGCTGCGCTGGCGCGTCA GGAAGTTGGCGCCGATTCAGGACCAATCGAACTCGAGAAGATCCAGGCGACGCTTCCGATCGATTCCGGGCGTCAGGCGT TGGTCACGGCTGGCGGCGGTGTGTTCAATCAGGCGACGAACCAGCTTTTGCTGAACAATGCGATCACCGTGGAGTCGAAC GCCGGCATATCTGCGCAGTTGAAATCCGCCGCTGTCGATATGTCATCCGGCAATCTCAGCACCGATGAGCCGGTCGACAT CGAAGTGAACGGCATGCGGGTCCGCGCCAAAAGCTTTCATACCGTTGACGGTCTCGAAAGACTTGTGTTCGAAAATGGAG TGCGCCTGGAGATTGATCCGGCTAGCGTGAGAAGAGCACAGGAAGAAGGGACCGCAGGTGATGGGTAG
Upstream 100 bases:
>100_bases GTGCGATAGGAAGCGGCGAGAGCAGCAGTGCTGCGGAGGGCGCGGATAGGCCGGGGGTGGATAGTCGCAAAGCGCCCTTT CGTTCGTCAGGAGTAGAGCG
Downstream 100 bases:
>100_bases GGTTCATGGCTTGGCTTTTGCGATGGGCCTTTTGATGCTCTGGCCCGCAGGGGGGCTTGCGCAGACCAGCGAATCAAGGC CCAGCCAGCTTGGCCTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MNSIAKAETSGIAAQAVKRSERGAEAFARAARHSRRVRVLKFVLPAVAVAISGLFLGYSLIAPTGIHALNLDSATIEGGS LVMHNPSLNGFTSGNLPYSVTAALARQEVGADSGPIELEKIQATLPIDSGRQALVTAGGGVFNQATNQLLLNNAITVESN AGISAQLKSAAVDMSSGNLSTDEPVDIEVNGMRVRAKSFHTVDGLERLVFENGVRLEIDPASVRRAQEEGTAGDG
Sequences:
>Translated_235_residues MNSIAKAETSGIAAQAVKRSERGAEAFARAARHSRRVRVLKFVLPAVAVAISGLFLGYSLIAPTGIHALNLDSATIEGGS LVMHNPSLNGFTSGNLPYSVTAALARQEVGADSGPIELEKIQATLPIDSGRQALVTAGGGVFNQATNQLLLNNAITVESN AGISAQLKSAAVDMSSGNLSTDEPVDIEVNGMRVRAKSFHTVDGLERLVFENGVRLEIDPASVRRAQEEGTAGDG >Mature_235_residues MNSIAKAETSGIAAQAVKRSERGAEAFARAARHSRRVRVLKFVLPAVAVAISGLFLGYSLIAPTGIHALNLDSATIEGGS LVMHNPSLNGFTSGNLPYSVTAALARQEVGADSGPIELEKIQATLPIDSGRQALVTAGGGVFNQATNQLLLNNAITVESN AGISAQLKSAAVDMSSGNLSTDEPVDIEVNGMRVRAKSFHTVDGLERLVFENGVRLEIDPASVRRAQEEGTAGDG
Specific function: Unknown
COG id: COG5375
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24461; Mature: 24461
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSIAKAETSGIAAQAVKRSERGAEAFARAARHSRRVRVLKFVLPAVAVAISGLFLGYSL CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAPTGIHALNLDSATIEGGSLVMHNPSLNGFTSGNLPYSVTAALARQEVGADSGPIELEK HCCCCCEEEECCCCEECCCEEEEECCCCCCEECCCCCHHHHHHHHHHHCCCCCCCEEEEE IQATLPIDSGRQALVTAGGGVFNQATNQLLLNNAITVESNAGISAQLKSAAVDMSSGNLS EEEECCCCCCCEEEEEECCCHHHHHHHHEECCCEEEEECCCCCCHHHHHHEEECCCCCCC TDEPVDIEVNGMRVRAKSFHTVDGLERLVFENGVRLEIDPASVRRAQEEGTAGDG CCCCEEEEECCEEEEECCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCC >Mature Secondary Structure MNSIAKAETSGIAAQAVKRSERGAEAFARAARHSRRVRVLKFVLPAVAVAISGLFLGYSL CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAPTGIHALNLDSATIEGGSLVMHNPSLNGFTSGNLPYSVTAALARQEVGADSGPIELEK HCCCCCEEEECCCCEECCCEEEEECCCCCCEECCCCCHHHHHHHHHHHCCCCCCCEEEEE IQATLPIDSGRQALVTAGGGVFNQATNQLLLNNAITVESNAGISAQLKSAAVDMSSGNLS EEEECCCCCCCEEEEEECCCHHHHHHHHEECCCEEEEECCCCCCHHHHHHEEECCCCCCC TDEPVDIEVNGMRVRAKSFHTVDGLERLVFENGVRLEIDPASVRRAQEEGTAGDG CCCCEEEEECCEEEEECCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA