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The map label for this gene is ybjT [C]

Identifier: 110635928

GI number: 110635928

Start: 3883117

End: 3884088

Strand: Reverse

Name: ybjT [C]

Synonym: Meso_3602

Alternate gene names: 110635928

Gene position: 3884088-3883117 (Counterclockwise)

Preceding gene: 110635931

Following gene: 110635927

Centisome position: 88.03

GC content: 63.27

Gene sequence:

>972_bases
ATGGCCATCATCAGCGAGAAACCAAAGCTCGTTACCGTGTTCGGCGGCTCCGGCTTTGTCGGCCGGCATGTGGTGCTGGC
GCTCACGCGAAGGGGCTATCGCGTGCGTGTCGCCTGCCGCAATCCGCACACGGCGATCTTCGTGAACACCCTTGGCACTA
TGGGCCAGGTGCACGCGGTCCAGGCGAATATCCGCTACCGGTGGTCCGTGGATCGCGCGGTGCACGGGGCCGATCACGTC
ATCAATCTGGTAGGTATCCTGCAGGAGTCCGGCCGCCAGCGCTTTGACGCCGTTCAAGCCATCGGCGCGCGGACGGTCGC
GGAGGCCGCCCGGTCCGTCGGCGCGGGTTTTACCCAGGCCTCCGCCATCGGCGCGGATCTTAACTCGCCAAGCGCCTATG
GCCGTACCAAGGCTGAAGGGGAGCAAGCTGTGCTGGAGACGGTGAAGAACGCCGTCATCATCCGCCCGTCCATCATCTTC
GGCACCGAAGACAAGTTCTTCAATCGCTTTGCCAATATGGCGCGATTCTCACCCGTCCTGCCGCTGATCGGCGGTGGGCA
AACCAGGTTTCAGCCAGTCTATGTGGGCGACGTGGCCGAAGTTTATGCCCGCTCCGTCGACGGGGTGCTGAAGCCCGGAG
CGACCTATGAATTGGGCGGCCCGCAGGTGCTCACCTTCCGCGAATGCATGGAGGAGATCCTTGAGGTGATCGAGCGCCGC
CGCGCCTTCATCTCCATTCCATGGCCACTTGCCCGCCTGCAGGCCCGCATTCTTGGCCTTTTGCCAAAGCCGCTCCTGAC
GCTCGATCAGGTTCGCATGCTCGCGGTGGACAATGTGGTTTCCGAAGAAGCAAAGAAGCGCGGCTTGACGCTCGAAGGCC
TGAAGATCCCCCAGCGCACGCTCGCGGCGATCCTGCCCACCTATCTTTGGACTTACCGGCCGGCCGGCCAGTTTACCCAG
CCGCAGATGTGA

Upstream 100 bases:

>100_bases
TCCCCATTCACCATTTACTATTCACCATTCACCTTCTTTGCCTTTGCAGCGAAAGGCGTTAAGAAGCGCCACCTGAGGCA
CAACCAGACCCGAGGCGTAG

Downstream 100 bases:

>100_bases
GGCGGGTGCTGCTTGGACGCACTTGTGCCGTTTTTCCTGCCGGATGAACTGAGCGTCACAGCGGCGTCCTTGCTTGTCGT
CGCAAGCTTCTTCACATCCG

Product: NAD-dependent epimerase/dehydratase

Products: NAD+; ubiquinol

Alternate protein names: NADH Dehydrogenase; NADH-Ubiquinone Oxidoreductase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase; NmrA Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; NADH-Ubiquinone Oxidoreductase Subunit; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; NADH-Ubiquinone Oxireductase; NADH Dehydrogenase/Oxidoreductase-Like Protein; NADH-Ubiquinone Oxidoreductase Family Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family; 3-Beta-Hydroxy-Delta(5)-Steroid Dehydrogenase; NADH Ubiquinone Oxidoreductase; Oxidoreductase Protein; Nucleoside-Diphosphate-Sugar Epimerases; Dtdp-Glucose-46-Dehydratase; NADH Dehydrogenase 1 Alpha Subcomplex; Dehydrogenase; NADH-Dependent Oxidoreductase; NADH Dehydrogenase/NADH Dehydrogenase Protein; Ubiquinone Dependent NADH Dehydrogenase; DTDP-4-Dehydrorhamnose Reductase; NADH Dehydrogenase Subunit; Transmembrane Oxidoreductase Protein; Homolog NADH Dehydrogenase; NADH Dehydrogenase-Like Protein; NAD Dependent Epimerase; Nucleoside-Diphosphate Sugar Epimerase; NADH-Ubiquinone Oxidoreductase -Like Protein; NADH-Ubiquinone Oxidoreductase Putativ; Saccharopine Dehydrogenase; NADH-Quinone Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase Protein; LOW QUALITY PROTEIN Oxidoreductase

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MAIISEKPKLVTVFGGSGFVGRHVVLALTRRGYRVRVACRNPHTAIFVNTLGTMGQVHAVQANIRYRWSVDRAVHGADHV
INLVGILQESGRQRFDAVQAIGARTVAEAARSVGAGFTQASAIGADLNSPSAYGRTKAEGEQAVLETVKNAVIIRPSIIF
GTEDKFFNRFANMARFSPVLPLIGGGQTRFQPVYVGDVAEVYARSVDGVLKPGATYELGGPQVLTFRECMEEILEVIERR
RAFISIPWPLARLQARILGLLPKPLLTLDQVRMLAVDNVVSEEAKKRGLTLEGLKIPQRTLAAILPTYLWTYRPAGQFTQ
PQM

Sequences:

>Translated_323_residues
MAIISEKPKLVTVFGGSGFVGRHVVLALTRRGYRVRVACRNPHTAIFVNTLGTMGQVHAVQANIRYRWSVDRAVHGADHV
INLVGILQESGRQRFDAVQAIGARTVAEAARSVGAGFTQASAIGADLNSPSAYGRTKAEGEQAVLETVKNAVIIRPSIIF
GTEDKFFNRFANMARFSPVLPLIGGGQTRFQPVYVGDVAEVYARSVDGVLKPGATYELGGPQVLTFRECMEEILEVIERR
RAFISIPWPLARLQARILGLLPKPLLTLDQVRMLAVDNVVSEEAKKRGLTLEGLKIPQRTLAAILPTYLWTYRPAGQFTQ
PQM
>Mature_322_residues
AIISEKPKLVTVFGGSGFVGRHVVLALTRRGYRVRVACRNPHTAIFVNTLGTMGQVHAVQANIRYRWSVDRAVHGADHVI
NLVGILQESGRQRFDAVQAIGARTVAEAARSVGAGFTQASAIGADLNSPSAYGRTKAEGEQAVLETVKNAVIIRPSIIFG
TEDKFFNRFANMARFSPVLPLIGGGQTRFQPVYVGDVAEVYARSVDGVLKPGATYELGGPQVLTFRECMEEILEVIERRR
AFISIPWPLARLQARILGLLPKPLLTLDQVRMLAVDNVVSEEAKKRGLTLEGLKIPQRTLAAILPTYLWTYRPAGQFTQP
QM

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=273, Percent_Identity=31.5018315018315, Blast_Score=127, Evalue=1e-29,
Organism=Escherichia coli, GI87081793, Length=302, Percent_Identity=22.5165562913907, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17556106, Length=235, Percent_Identity=31.9148936170213, Blast_Score=100, Evalue=8e-22,
Organism=Drosophila melanogaster, GI24667554, Length=338, Percent_Identity=28.1065088757396, Blast_Score=99, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.5.3; 1.6.99.3

Molecular weight: Translated: 35404; Mature: 35272

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIISEKPKLVTVFGGSGFVGRHVVLALTRRGYRVRVACRNPHTAIFVNTLGTMGQVHAV
CCCCCCCCCEEEEECCCCCHHHHHHHHEECCCCEEEEEECCCCCEEEEECCCCCCCEEEE
QANIRYRWSVDRAVHGADHVINLVGILQESGRQRFDAVQAIGARTVAEAARSVGAGFTQA
EECEEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
SAIGADLNSPSAYGRTKAEGEQAVLETVKNAVIIRPSIIFGTEDKFFNRFANMARFSPVL
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEECCEEEECCCHHHHHHHHHHHHHCCCC
PLIGGGQTRFQPVYVGDVAEVYARSVDGVLKPGATYELGGPQVLTFRECMEEILEVIERR
CEECCCCCEEEEEEECHHHHHHHHHHCCCCCCCCEEECCCCEEEHHHHHHHHHHHHHHHC
RAFISIPWPLARLQARILGLLPKPLLTLDQVRMLAVDNVVSEEAKKRGLTLEGLKIPQRT
CCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHH
LAAILPTYLWTYRPAGQFTQPQM
HHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AIISEKPKLVTVFGGSGFVGRHVVLALTRRGYRVRVACRNPHTAIFVNTLGTMGQVHAV
CCCCCCCCEEEEECCCCCHHHHHHHHEECCCCEEEEEECCCCCEEEEECCCCCCCEEEE
QANIRYRWSVDRAVHGADHVINLVGILQESGRQRFDAVQAIGARTVAEAARSVGAGFTQA
EECEEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
SAIGADLNSPSAYGRTKAEGEQAVLETVKNAVIIRPSIIFGTEDKFFNRFANMARFSPVL
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEECCEEEECCCHHHHHHHHHHHHHCCCC
PLIGGGQTRFQPVYVGDVAEVYARSVDGVLKPGATYELGGPQVLTFRECMEEILEVIERR
CEECCCCCEEEEEEECHHHHHHHHHHCCCCCCCCEEECCCCEEEHHHHHHHHHHHHHHHC
RAFISIPWPLARLQARILGLLPKPLLTLDQVRMLAVDNVVSEEAKKRGLTLEGLKIPQRT
CCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHH
LAAILPTYLWTYRPAGQFTQPQM
HHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA