| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is yeeZ [C]
Identifier: 110635923
GI number: 110635923
Start: 3878677
End: 3879552
Strand: Reverse
Name: yeeZ [C]
Synonym: Meso_3597
Alternate gene names: 110635923
Gene position: 3879552-3878677 (Counterclockwise)
Preceding gene: 110635924
Following gene: 110635922
Centisome position: 87.92
GC content: 61.64
Gene sequence:
>876_bases ATGCGCCGGGTCTTCATTTTCGGCGCGGGCTATAGCGGCCGGGCGATTGCGCGTGTGCTTGCCCATAAGGCGGATTCAAT CGCGGGGACGACCCGCAGCGCCGAGAAGGCGGAGGCGCTTGCGCGGATGGGAATCAAGCCGCTTATCTACGCGGAAGGCG GTTTCACCCCGGAACTGACCGGTACGCTGCGCGAGACGACGCACCTGATCCTTTCCATAGCGCCCGGCGAAAATGGCGAC GCGGTGTTGGCAGAGCTGATTAGGCGCGGCCGTGGTGCGATGCCCAATCTGCAATGGATCTGCTATCTCTCCACCGTCGG CGTCTATGGCGACCACAATTGCGCAGAGGTAACCGAGGAAAGCGAATGCCAGCCCATTTCCGCCCGCTCGCACCGGCGGC TCGAAACCGAGAAGGCGTGGTCCCGTTTCGGCGATGAGATTGGAGTTCCCGTCGCGATTCTTCGCCTTTCCGGCATTTAT GGTCCGGGCCGTAACGCGATCGTGAATCTTGTGGAGGGGGCGGCCCGGCGCATCGTCAAACCGGGGCAGGTCTTCAACCG CATTCACGTCGACGATATAGCCGGCGCCGCGCGCCACTTGCTGAATGCGAAGGCCCACGGCACCTTCAATGTGAGCGATG ACGAGCCTTCACCGCCACAGGACGTGGTGGCGTTTGCCGCGCATTTGACCGGGGTCGAGCCCGCGCCGGAAATCCCGTTC GAAGAGGCGAAACTGAGCCCCATGGCTCGGTCCTTCTATTCGGAATGCAAGCGGGTTTCGAATGCTAAGCTGAAGGGGCT TGGCTATTCGTTGCGTTACCCAAATTACCGGGAAGGACTCTCCGCCCTTTGGAAAACCGGTCTTTGGAGAGGCTAG
Upstream 100 bases:
>100_bases CAGGAAAGTTCGACGCGTTGCGGCGGCGCATGCGGCCGCTTGAACCCCATCCGCAGGTTCAGGCCGAATGGGACTATGCC GCCGTGGAGGTGCCTGCCTG
Downstream 100 bases:
>100_bases AGCACCGTGTTGTGTGCGGCCTTTAGCACACGCGGCGCCCTAAGCTGCCGCAAATATGCTATGATTCGTTTGGACCTTCG TTGCTCGAAAGAGGCTCGCA
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase Protein; Nucleoside-Diphosphate-Sugar Epimerases; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase Protein; NAD Dependent Epimerase/Dehydratase; ActC Family Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Sugar Epimerase/Dehydratase-Like Protein; Oxidoreductase; Epimerase/Dehydratase-Related Protein; Phosphate ABC Transporter Permease; Ketopantoate Reductase ApbA/PanE Domain Protein; NAD Epimerase/Dehydratase Protein; NAD-Dependent Epimerase; DTDP-4-Dehydrorhamnose Reductase; NAD Dependent Epimerase/Dehydratase-Related Protein; Actc Protein; NADP Oxidoreductase Co
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MRRVFIFGAGYSGRAIARVLAHKADSIAGTTRSAEKAEALARMGIKPLIYAEGGFTPELTGTLRETTHLILSIAPGENGD AVLAELIRRGRGAMPNLQWICYLSTVGVYGDHNCAEVTEESECQPISARSHRRLETEKAWSRFGDEIGVPVAILRLSGIY GPGRNAIVNLVEGAARRIVKPGQVFNRIHVDDIAGAARHLLNAKAHGTFNVSDDEPSPPQDVVAFAAHLTGVEPAPEIPF EEAKLSPMARSFYSECKRVSNAKLKGLGYSLRYPNYREGLSALWKTGLWRG
Sequences:
>Translated_291_residues MRRVFIFGAGYSGRAIARVLAHKADSIAGTTRSAEKAEALARMGIKPLIYAEGGFTPELTGTLRETTHLILSIAPGENGD AVLAELIRRGRGAMPNLQWICYLSTVGVYGDHNCAEVTEESECQPISARSHRRLETEKAWSRFGDEIGVPVAILRLSGIY GPGRNAIVNLVEGAARRIVKPGQVFNRIHVDDIAGAARHLLNAKAHGTFNVSDDEPSPPQDVVAFAAHLTGVEPAPEIPF EEAKLSPMARSFYSECKRVSNAKLKGLGYSLRYPNYREGLSALWKTGLWRG >Mature_291_residues MRRVFIFGAGYSGRAIARVLAHKADSIAGTTRSAEKAEALARMGIKPLIYAEGGFTPELTGTLRETTHLILSIAPGENGD AVLAELIRRGRGAMPNLQWICYLSTVGVYGDHNCAEVTEESECQPISARSHRRLETEKAWSRFGDEIGVPVAILRLSGIY GPGRNAIVNLVEGAARRIVKPGQVFNRIHVDDIAGAARHLLNAKAHGTFNVSDDEPSPPQDVVAFAAHLTGVEPAPEIPF EEAKLSPMARSFYSECKRVSNAKLKGLGYSLRYPNYREGLSALWKTGLWRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31663; Mature: 31663
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVFIFGAGYSGRAIARVLAHKADSIAGTTRSAEKAEALARMGIKPLIYAEGGFTPELT CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHH GTLRETTHLILSIAPGENGDAVLAELIRRGRGAMPNLQWICYLSTVGVYGDHNCAEVTEE HHHHHCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEHHCCCCCCCHHHCCCC SECQPISARSHRRLETEKAWSRFGDEIGVPVAILRLSGIYGPGRNAIVNLVEGAARRIVK CCCCCCCHHHHHHHHHHHHHHHHCHHCCCHHEEHHHHCCCCCCHHHHHHHHHHHHHHHCC PGQVFNRIHVDDIAGAARHLLNAKAHGTFNVSDDEPSPPQDVVAFAAHLTGVEPAPEIPF CHHHHHECCHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCH EEAKLSPMARSFYSECKRVSNAKLKGLGYSLRYPNYREGLSALWKTGLWRG HHHHCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MRRVFIFGAGYSGRAIARVLAHKADSIAGTTRSAEKAEALARMGIKPLIYAEGGFTPELT CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHH GTLRETTHLILSIAPGENGDAVLAELIRRGRGAMPNLQWICYLSTVGVYGDHNCAEVTEE HHHHHCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEHHCCCCCCCHHHCCCC SECQPISARSHRRLETEKAWSRFGDEIGVPVAILRLSGIYGPGRNAIVNLVEGAARRIVK CCCCCCCHHHHHHHHHHHHHHHHCHHCCCHHEEHHHHCCCCCCHHHHHHHHHHHHHHHCC PGQVFNRIHVDDIAGAARHLLNAKAHGTFNVSDDEPSPPQDVVAFAAHLTGVEPAPEIPF CHHHHHECCHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCH EEAKLSPMARSFYSECKRVSNAKLKGLGYSLRYPNYREGLSALWKTGLWRG HHHHCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA