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The map label for this gene is yaeJ [C]

Identifier: 110635829

GI number: 110635829

Start: 3772056

End: 3772487

Strand: Reverse

Name: yaeJ [C]

Synonym: Meso_3501

Alternate gene names: 110635829

Gene position: 3772487-3772056 (Counterclockwise)

Preceding gene: 110635830

Following gene: 110635828

Centisome position: 85.5

GC content: 63.19

Gene sequence:

>432_bases
ATGGACGACGGCCTCGAAATTCGGCCCGGCATTTTCGTCGAGGAAGACGAGCTGGAGGAACAGTTCATCCGCTCCTCCGG
CCCTGGCGGGCAGAACGTCAACAAGGTGGCGACGGCGGTGCAGCTGCGTTTCGACGTTGCGAATGCGCGGCACCTGCCGG
AGCGCGTAAGAGCGCAAGCCCTGAAGCTGGCCGGGAGCCGCGCCACCAAGGAAGGCGAGATCGTCATTGAAGCGGGGCGC
TTCCGCACACAGGAGCAGAATCGGTCAGATGCCCGCCGGCGATTGACCGAACTCCTTCTCAAGGCATCTGAGCCTCCACC
CAAGCCACGGAAGAAGACCAAGCCCTCGAAGGGCGCGGTCGAGCGCCGGCTCAAGGAAAAGGCTGGCCGTTCCACCGTAA
AGAAGATGCGCGGGAGAGTCTCTTTCGACTGA

Upstream 100 bases:

>100_bases
GCTGAATAGGCTTGCTCCCGCGGCGTTGGCGGACCATCTTTCGATGTGAATCGCGGCTGGCAGCTTAGTCCGCCGCTCCG
GAACGTCAGAGCGGGTAGCT

Downstream 100 bases:

>100_bases
AGAAGGCTGTGCCGTTGATTGCAGTTCGACTTAGGGCAAGGTTCACCCGATAGCACATGCTCTCCCTCCCTCCCGGAATA
AGGCATATGCCAGGCCTCCT

Product: peptidyl-tRNA hydrolase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MDDGLEIRPGIFVEEDELEEQFIRSSGPGGQNVNKVATAVQLRFDVANARHLPERVRAQALKLAGSRATKEGEIVIEAGR
FRTQEQNRSDARRRLTELLLKASEPPPKPRKKTKPSKGAVERRLKEKAGRSTVKKMRGRVSFD

Sequences:

>Translated_143_residues
MDDGLEIRPGIFVEEDELEEQFIRSSGPGGQNVNKVATAVQLRFDVANARHLPERVRAQALKLAGSRATKEGEIVIEAGR
FRTQEQNRSDARRRLTELLLKASEPPPKPRKKTKPSKGAVERRLKEKAGRSTVKKMRGRVSFD
>Mature_143_residues
MDDGLEIRPGIFVEEDELEEQFIRSSGPGGQNVNKVATAVQLRFDVANARHLPERVRAQALKLAGSRATKEGEIVIEAGR
FRTQEQNRSDARRRLTELLLKASEPPPKPRKKTKPSKGAVERRLKEKAGRSTVKKMRGRVSFD

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Homo sapiens, GI4557657, Length=133, Percent_Identity=33.8345864661654, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1786389, Length=130, Percent_Identity=41.5384615384615, Blast_Score=93, Evalue=7e-21,
Organism=Drosophila melanogaster, GI19921098, Length=130, Percent_Identity=39.2307692307692, Blast_Score=83, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 16074; Mature: 16074

Theoretical pI: Translated: 11.17; Mature: 11.17

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDGLEIRPGIFVEEDELEEQFIRSSGPGGQNVNKVATAVQLRFDVANARHLPERVRAQA
CCCCCCCCCCCEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LKLAGSRATKEGEIVIEAGRFRTQEQNRSDARRRLTELLLKASEPPPKPRKKTKPSKGAV
HHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
ERRLKEKAGRSTVKKMRGRVSFD
HHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDDGLEIRPGIFVEEDELEEQFIRSSGPGGQNVNKVATAVQLRFDVANARHLPERVRAQA
CCCCCCCCCCCEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LKLAGSRATKEGEIVIEAGRFRTQEQNRSDARRRLTELLLKASEPPPKPRKKTKPSKGAV
HHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
ERRLKEKAGRSTVKKMRGRVSFD
HHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]