| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110635755
Identifier: 110635755
GI number: 110635755
Start: 3706385
End: 3706804
Strand: Reverse
Name: 110635755
Synonym: Meso_3427
Alternate gene names: NA
Gene position: 3706804-3706385 (Counterclockwise)
Preceding gene: 110635756
Following gene: 110635754
Centisome position: 84.01
GC content: 59.29
Gene sequence:
>420_bases ATGTCTTGGCTCAACCTGATGGTCAAGCGCGGAGCGTCCATAGGCCTTTTCGGCATTTTTGGCCGGTCGGAGGATATGCG CCGGCTGGACGAGGCGTTGCGGCGGTCAGGCATTCATCCGGGCAGTGTGCCGGAAGGCGTCAAACTCGCGACCGTTAGTC TAATGGCCCAGAACGGCACCGAGCCGCCGGCGGAAGCCTATCCATCCGTGGGCGACCTCATGGCTTTCTGCATGGTCGGC CGGGAAGAATTTGCTAGGCACAACGGCGAGGCTCGGCTGGAGAGCGCGATAAAACGGCTTGAACTGGCGCTGGAAGCGGG CGAGGGCCAGGATGCGGAGCTTATCCTGCTTATGTTTCATGCAAAGCTGCTGGATCGTGATCTCATTGATCGCTATGAGA TCAGCGCGGAAAATGGATGA
Upstream 100 bases:
>100_bases CAAACCCGAGCGAGCGCAATCCCGCCCAGCCCTCAGCTGCTTTGAGGCGGCTTGCTTCCGTCGTCGAGGCTCGCGCGCAG CGGGCCGGCGGCTATGTCGG
Downstream 100 bases:
>100_bases CCGGGCGGGCTCGGCCAGCGCGAAAAATCGCCGCGCCCACTGGCCAAGACGCATATTCCCGTGTATAGGCGGGCCCCAAT CGCAGGATTTGAGGCCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MSWLNLMVKRGASIGLFGIFGRSEDMRRLDEALRRSGIHPGSVPEGVKLATVSLMAQNGTEPPAEAYPSVGDLMAFCMVG REEFARHNGEARLESAIKRLELALEAGEGQDAELILLMFHAKLLDRDLIDRYEISAENG
Sequences:
>Translated_139_residues MSWLNLMVKRGASIGLFGIFGRSEDMRRLDEALRRSGIHPGSVPEGVKLATVSLMAQNGTEPPAEAYPSVGDLMAFCMVG REEFARHNGEARLESAIKRLELALEAGEGQDAELILLMFHAKLLDRDLIDRYEISAENG >Mature_138_residues SWLNLMVKRGASIGLFGIFGRSEDMRRLDEALRRSGIHPGSVPEGVKLATVSLMAQNGTEPPAEAYPSVGDLMAFCMVGR EEFARHNGEARLESAIKRLELALEAGEGQDAELILLMFHAKLLDRDLIDRYEISAENG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15302; Mature: 15171
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWLNLMVKRGASIGLFGIFGRSEDMRRLDEALRRSGIHPGSVPEGVKLATVSLMAQNGT CHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCC EPPAEAYPSVGDLMAFCMVGREEFARHNGEARLESAIKRLELALEAGEGQDAELILLMFH CCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH AKLLDRDLIDRYEISAENG HHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SWLNLMVKRGASIGLFGIFGRSEDMRRLDEALRRSGIHPGSVPEGVKLATVSLMAQNGT HHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCC EPPAEAYPSVGDLMAFCMVGREEFARHNGEARLESAIKRLELALEAGEGQDAELILLMFH CCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH AKLLDRDLIDRYEISAENG HHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA