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The map label for this gene is sdhD [H]

Identifier: 110635574

GI number: 110635574

Start: 3512890

End: 3513273

Strand: Reverse

Name: sdhD [H]

Synonym: Meso_3245

Alternate gene names: 110635574

Gene position: 3513273-3512890 (Counterclockwise)

Preceding gene: 110635575

Following gene: 110635573

Centisome position: 79.62

GC content: 59.64

Gene sequence:

>384_bases
ATGGCGGATATGCGCACACCTCTCAACAAGGTCCGCGGTCTGGGCTCGGCGCGCGGCGGCACGGAGCACTTTTGGCGCCA
GCGGCTGACGGCGGTCTCCAATATCCCGCTCATCATCTTCTTCATCGGCTTTGTGGCAGCTTATTCCGGATCCTCCTACG
AGGAGATCCGGGCAGCGCTTGCGCAGCCTGTCAGCGCGCTCCTTATGGGCCTTGCCTTCGTTTCGGTGCTGTACCACATG
CGCTTGGGAATGCAGGTGATCATCGAGGATTACGTGCATGGCGAGGGCTGGAAGATCGCACTCATCCTCCTCAATACTTT
CTTTCCCGTCATCGTCGGCGCGATCGCGCTCTATTCCCTCCTCAGAATTGCCTTCGGAGGCTGA

Upstream 100 bases:

>100_bases
GAGACCTCACGCAGGCTCGCGATCGCGAACCTGATCGGCTCCATTCTTGTGACGCTGATCATCTGGGGTGGCGCCTGGGC
AATCAGAGGAGGTCTCTGAG

Downstream 100 bases:

>100_bases
AGTCTAAATGGCTGCTGCAGTTCAGAACAAGGCCGGCCCGGCCTATACTTACGTCGATCATGTCTTTGATGTGGTGGTGG
TCGGGGCCGGTGGCGCGGGC

Product: succinate dehydrogenase subunit D

Products: fumarate; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MADMRTPLNKVRGLGSARGGTEHFWRQRLTAVSNIPLIIFFIGFVAAYSGSSYEEIRAALAQPVSALLMGLAFVSVLYHM
RLGMQVIIEDYVHGEGWKIALILLNTFFPVIVGAIALYSLLRIAFGG

Sequences:

>Translated_127_residues
MADMRTPLNKVRGLGSARGGTEHFWRQRLTAVSNIPLIIFFIGFVAAYSGSSYEEIRAALAQPVSALLMGLAFVSVLYHM
RLGMQVIIEDYVHGEGWKIALILLNTFFPVIVGAIALYSLLRIAFGG
>Mature_126_residues
ADMRTPLNKVRGLGSARGGTEHFWRQRLTAVSNIPLIIFFIGFVAAYSGSSYEEIRAALAQPVSALLMGLAFVSVLYHMR
LGMQVIIEDYVHGEGWKIALILLNTFFPVIVGAIALYSLLRIAFGG

Specific function: Membrane-anchoring subunit of succinate dehydrogenase (SDH) [H]

COG id: COG2142

COG function: function code C; Succinate dehydrogenase, hydrophobic anchor subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014312
- InterPro:   IPR000701 [H]

Pfam domain/function: PF01127 Sdh_cyt [H]

EC number: 1.3.99.1

Molecular weight: Translated: 13946; Mature: 13815

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADMRTPLNKVRGLGSARGGTEHFWRQRLTAVSNIPLIIFFIGFVAAYSGSSYEEIRAAL
CCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHH
AQPVSALLMGLAFVSVLYHMRLGMQVIIEDYVHGEGWKIALILLNTFFPVIVGAIALYSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LRIAFGG
HHHHCCC
>Mature Secondary Structure 
ADMRTPLNKVRGLGSARGGTEHFWRQRLTAVSNIPLIIFFIGFVAAYSGSSYEEIRAAL
CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHH
AQPVSALLMGLAFVSVLYHMRLGMQVIIEDYVHGEGWKIALILLNTFFPVIVGAIALYSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LRIAFGG
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA