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The map label for this gene is ybgC [C]

Identifier: 110635504

GI number: 110635504

Start: 3447999

End: 3448463

Strand: Reverse

Name: ybgC [C]

Synonym: Meso_3175

Alternate gene names: 110635504

Gene position: 3448463-3447999 (Counterclockwise)

Preceding gene: 110635505

Following gene: 110635503

Centisome position: 78.15

GC content: 57.85

Gene sequence:

>465_bases
ATGATCGAAAACGACAGCACCCTCACTTCCGGCATCAGCGGCGAGCTTACCGAGAGCGGCCATCGCCTGATGGCGCGTGT
CTATTTCGCGGATACCGACTTCACCGGTGTGGTATATCACGCGCGGTATCTTGAATTCCTGGAACGGGGCCGCTCGGATT
TTCTGCGCCTTTCCGGTGTGCACCACACAGAGCTTGCCGATGGCAAGCATGGCGAAAGGCTGTCATGGGTTGTGCGGCGC
ATGGAAATCGATTTCCGGCAGCCGGCGCGAATCGACGACATCATCAGTATAGAAACGTATATTGAAGATATATCAGGCGC
GCGCATTTATATGCGCCAGCGTCTGAAGCGGGATGATGTCCTTCTGGTTGAGGCGCGGGTGGAGGCGGCAGTTATTGGCG
AAGGCGGCAGACCCCGGCGGTTTCCAAAAGAATGGATCGCGGCCTTTCTGCGGCGGCCGGACTGA

Upstream 100 bases:

>100_bases
GAATTTCGCGAAAGGGAGCAGCGAGTAGAGATCTGGTAAGGCGATCAGACCAGCAGATCTTTCCATTCACTGCTCCCTGT
TCGCTATTCGCTTGTACGCT

Downstream 100 bases:

>100_bases
ACGCCGACGGCATTAATCGCAAAGTTATAAGCGGATTGGTAATACTGCGTTAACCATACATCTTCATATCATGAAACGCG
CCACCTGGGCCCGAACGCCT

Product: 4-hydroxybenzoyl-CoA thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MIENDSTLTSGISGELTESGHRLMARVYFADTDFTGVVYHARYLEFLERGRSDFLRLSGVHHTELADGKHGERLSWVVRR
MEIDFRQPARIDDIISIETYIEDISGARIYMRQRLKRDDVLLVEARVEAAVIGEGGRPRRFPKEWIAAFLRRPD

Sequences:

>Translated_154_residues
MIENDSTLTSGISGELTESGHRLMARVYFADTDFTGVVYHARYLEFLERGRSDFLRLSGVHHTELADGKHGERLSWVVRR
MEIDFRQPARIDDIISIETYIEDISGARIYMRQRLKRDDVLLVEARVEAAVIGEGGRPRRFPKEWIAAFLRRPD
>Mature_154_residues
MIENDSTLTSGISGELTESGHRLMARVYFADTDFTGVVYHARYLEFLERGRSDFLRLSGVHHTELADGKHGERLSWVVRR
MEIDFRQPARIDDIISIETYIEDISGARIYMRQRLKRDDVLLVEARVEAAVIGEGGRPRRFPKEWIAAFLRRPD

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=126, Percent_Identity=38.8888888888889, Blast_Score=91, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 17838; Mature: 17838

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIENDSTLTSGISGELTESGHRLMARVYFADTDFTGVVYHARYLEFLERGRSDFLRLSGV
CCCCCCCCCCCCCCCHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHCCC
HHTELADGKHGERLSWVVRRMEIDFRQPARIDDIISIETYIEDISGARIYMRQRLKRDDV
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCE
LLVEARVEAAVIGEGGRPRRFPKEWIAAFLRRPD
EEEEEEEEEEEECCCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MIENDSTLTSGISGELTESGHRLMARVYFADTDFTGVVYHARYLEFLERGRSDFLRLSGV
CCCCCCCCCCCCCCCHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHCCC
HHTELADGKHGERLSWVVRRMEIDFRQPARIDDIISIETYIEDISGARIYMRQRLKRDDV
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCE
LLVEARVEAAVIGEGGRPRRFPKEWIAAFLRRPD
EEEEEEEEEEEECCCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]