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The map label for this gene is 110635493

Identifier: 110635493

GI number: 110635493

Start: 3435323

End: 3436006

Strand: Reverse

Name: 110635493

Synonym: Meso_3164

Alternate gene names: NA

Gene position: 3436006-3435323 (Counterclockwise)

Preceding gene: 110635494

Following gene: 110635491

Centisome position: 77.87

GC content: 58.92

Gene sequence:

>684_bases
ATGCAGAAATCCTGCAGCCTTACCTTGATCGCGGCTGCGATCCTGTTCGCCCAGGCAGAGCCGGGTCGCGCGGCCGACTA
TGACCCGCCTATGATCATCGAAGAGGCGCCGCTCGTGCCGGTCGAAGTCGGCTCCGGTTGGTATCTGCGCGGCGATGTCA
GCTATAGCGTCAACAAGTCCGTCTACGATGTCGATACTCTCGCCGATGATATCGATAACAACCGCATTGGCGGCAGCGTC
GGCGTCGGGCACCATTTCACCGATCTCCTGCGGGCTGACATCAATGTCGCCTATATCGCGGGCGACGACTATGACGACGG
CGTCATCGCAGCGGAACGCCGGGTTTGGAGCGGCATGGTCAACGGCTATCTGGACTTGGGCACCTTTGTGGGCCTGACCC
CCTATGTGGGCGCCGGCGCCGGGCTCCTCTATACGAGCCACGAAATTTCAGGCTCCGATCCGTTCTTCACCGACGCGTTC
AGCTCGATCGACCGTCAATACGAGTTTGCCTACGCGCTCAATGCCGGCGTGAGCTACCAGATGACGAATAACCTGTCGGT
CGATGTCGGCTACCAATATCTAAATTCGCCCGGCACGAAATATGTGGATGTGGACCGTGGCACCGTGGAAGAGGGGGTGG
ATTTCCACCAGGTGAAAATGGGCCTGAGATACGATCTCTGGTAA

Upstream 100 bases:

>100_bases
ACCTCCCGTTATCCTTAACTGCTGCTTAACCCGGATGGTTAAGAATCTCCGCAGGACGGGGGGCATCTAAAACTCCGTCG
CGATTTGCGGAGAAAATTCC

Downstream 100 bases:

>100_bases
GCGGTTCGGGCACGCGGTTCCAAATGGAAAAGGGCCGGCATGGAAGCATGCCGGCCCTTCTTTCTCGCTAATTTCGATCG
AAGCTCAGGCAGGCCGCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MQKSCSLTLIAAAILFAQAEPGRAADYDPPMIIEEAPLVPVEVGSGWYLRGDVSYSVNKSVYDVDTLADDIDNNRIGGSV
GVGHHFTDLLRADINVAYIAGDDYDDGVIAAERRVWSGMVNGYLDLGTFVGLTPYVGAGAGLLYTSHEISGSDPFFTDAF
SSIDRQYEFAYALNAGVSYQMTNNLSVDVGYQYLNSPGTKYVDVDRGTVEEGVDFHQVKMGLRYDLW

Sequences:

>Translated_227_residues
MQKSCSLTLIAAAILFAQAEPGRAADYDPPMIIEEAPLVPVEVGSGWYLRGDVSYSVNKSVYDVDTLADDIDNNRIGGSV
GVGHHFTDLLRADINVAYIAGDDYDDGVIAAERRVWSGMVNGYLDLGTFVGLTPYVGAGAGLLYTSHEISGSDPFFTDAF
SSIDRQYEFAYALNAGVSYQMTNNLSVDVGYQYLNSPGTKYVDVDRGTVEEGVDFHQVKMGLRYDLW
>Mature_227_residues
MQKSCSLTLIAAAILFAQAEPGRAADYDPPMIIEEAPLVPVEVGSGWYLRGDVSYSVNKSVYDVDTLADDIDNNRIGGSV
GVGHHFTDLLRADINVAYIAGDDYDDGVIAAERRVWSGMVNGYLDLGTFVGLTPYVGAGAGLLYTSHEISGSDPFFTDAF
SSIDRQYEFAYALNAGVSYQMTNNLSVDVGYQYLNSPGTKYVDVDRGTVEEGVDFHQVKMGLRYDLW

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen msp4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR002566 [H]

Pfam domain/function: PF01617 Surface_Ag_2 [H]

EC number: NA

Molecular weight: Translated: 24730; Mature: 24730

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKSCSLTLIAAAILFAQAEPGRAADYDPPMIIEEAPLVPVEVGSGWYLRGDVSYSVNKS
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEECCCEEEEEEEEEECCCC
VYDVDTLADDIDNNRIGGSVGVGHHFTDLLRADINVAYIAGDDYDDGVIAAERRVWSGMV
EEEHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCEEHHHHHHHHHHH
NGYLDLGTFVGLTPYVGAGAGLLYTSHEISGSDPFFTDAFSSIDRQYEFAYALNAGVSYQ
HCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHEEEEEEECCCEEEE
MTNNLSVDVGYQYLNSPGTKYVDVDRGTVEEGVDFHQVKMGLRYDLW
EECCEEEEECHHHHCCCCCEEEECCCCCHHHCCCHHHEEECEEECCC
>Mature Secondary Structure
MQKSCSLTLIAAAILFAQAEPGRAADYDPPMIIEEAPLVPVEVGSGWYLRGDVSYSVNKS
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEECCCEEEEEEEEEECCCC
VYDVDTLADDIDNNRIGGSVGVGHHFTDLLRADINVAYIAGDDYDDGVIAAERRVWSGMV
EEEHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCEEHHHHHHHHHHH
NGYLDLGTFVGLTPYVGAGAGLLYTSHEISGSDPFFTDAFSSIDRQYEFAYALNAGVSYQ
HCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHEEEEEEECCCEEEE
MTNNLSVDVGYQYLNSPGTKYVDVDRGTVEEGVDFHQVKMGLRYDLW
EECCEEEEECHHHHCCCCCEEEECCCCCHHHCCCHHHEEECEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA