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The map label for this gene is glnM [H]

Identifier: 110635477

GI number: 110635477

Start: 3417433

End: 3418320

Strand: Reverse

Name: glnM [H]

Synonym: Meso_3148

Alternate gene names: 110635477

Gene position: 3418320-3417433 (Counterclockwise)

Preceding gene: 110635478

Following gene: 110635476

Centisome position: 77.47

GC content: 60.59

Gene sequence:

>888_bases
TTGCTTCTGTGGCCAGCAATCAAGAGCGTCACACGCGGGCAGAAGGCGCGGGATGCGGTTGCGGCCCACGATCTGATCAC
CGCGCGGATCGAGACGGCCAGTGCACTCAACTACGCGCATTATACGGTCGGCTTTGCCGCCCTCTTCGTGGTGGTCATCG
CCCTTGCGCAGTTTCTGATGGCGAACAATCTCGCCGTCAGCCGCACCTTCCTGTCCGTACCGCTGCTCGACCTGTCGTTT
CCCCTCATCCTGAAGGCGTTCTGGGTCAATATCTATATCTTCGTCGTAGCCGAAATATGCGTCCTCGTCTGGGGCCTGAT
CGTCGCGGTGGCGCGGCTCATCCCCGGCAAAACGGCCGCACCAATCCGGGCGATCGCAACGCTCTATACCGACATTTTCC
GCGGTATGCCCGCGATCATCACGATTTACCTGATCGGGTTCGGCCTGCCGCTGAGCGGCCTGCCGATCCTCAAGGATCTT
TCGGTCGAGACCTATGCCATCATCGCATTGACGCTTACCTTCGGCGCCTATGTCGCCGAGGTCTACCGCGCCGGCATCGA
AAGCATTCACTGGAGCCAGGTGGCCGCCGCCCGTTCGCTCGGCCTCACCTACATGCAGACGATGCGCTACGTCATTGTGC
CCCAGGCGGTGCGCCGTATCGTCCCGCCGCTTCTTAACGATTTCATCGGCCTGCAGAAGGATACCGCTCTCGTTAACGTC
ATCGGCTCCATCGATGCCTTCAACCAGGCGAAGATCCTATCGAGCAACTATTTCAACCTCTCGCCCGTCACCGTGGTGGC
CTTCCTCTTCGTGGTAATCACCATTCCGCAGGCCCGGTTCGTTGACCGGATACTCGAAAGGGAGCAGCGGCGCACGCGCG
CCGGGTAA

Upstream 100 bases:

>100_bases
ATGGGCGACCTTCCAAGCCGCCGGCCAACACGCGGCCGCCTTTGGATTGGGTGGGACTGTTTCGTCCCTGCTGTTCTGGG
TACCGGTTTTCTGCGCGGCG

Downstream 100 bases:

>100_bases
GGATCCGCCATGGCCATGATCGAAATCAGGAATATCTCTAAATCCTATGGCACGTTCCAGGTCTTCGACGGATTGAGCCT
TGAGGTCGAGGAGCACCAGG

Product: polar amino acid ABC transporter, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MLLWPAIKSVTRGQKARDAVAAHDLITARIETASALNYAHYTVGFAALFVVVIALAQFLMANNLAVSRTFLSVPLLDLSF
PLILKAFWVNIYIFVVAEICVLVWGLIVAVARLIPGKTAAPIRAIATLYTDIFRGMPAIITIYLIGFGLPLSGLPILKDL
SVETYAIIALTLTFGAYVAEVYRAGIESIHWSQVAAARSLGLTYMQTMRYVIVPQAVRRIVPPLLNDFIGLQKDTALVNV
IGSIDAFNQAKILSSNYFNLSPVTVVAFLFVVITIPQARFVDRILEREQRRTRAG

Sequences:

>Translated_295_residues
MLLWPAIKSVTRGQKARDAVAAHDLITARIETASALNYAHYTVGFAALFVVVIALAQFLMANNLAVSRTFLSVPLLDLSF
PLILKAFWVNIYIFVVAEICVLVWGLIVAVARLIPGKTAAPIRAIATLYTDIFRGMPAIITIYLIGFGLPLSGLPILKDL
SVETYAIIALTLTFGAYVAEVYRAGIESIHWSQVAAARSLGLTYMQTMRYVIVPQAVRRIVPPLLNDFIGLQKDTALVNV
IGSIDAFNQAKILSSNYFNLSPVTVVAFLFVVITIPQARFVDRILEREQRRTRAG
>Mature_295_residues
MLLWPAIKSVTRGQKARDAVAAHDLITARIETASALNYAHYTVGFAALFVVVIALAQFLMANNLAVSRTFLSVPLLDLSF
PLILKAFWVNIYIFVVAEICVLVWGLIVAVARLIPGKTAAPIRAIATLYTDIFRGMPAIITIYLIGFGLPLSGLPILKDL
SVETYAIIALTLTFGAYVAEVYRAGIESIHWSQVAAARSLGLTYMQTMRYVIVPQAVRRIVPPLLNDFIGLQKDTALVNV
IGSIDAFNQAKILSSNYFNLSPVTVVAFLFVVITIPQARFVDRILEREQRRTRAG

Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=227, Percent_Identity=35.6828193832599, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1787030, Length=215, Percent_Identity=33.0232558139535, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1786873, Length=220, Percent_Identity=32.7272727272727, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI87082239, Length=194, Percent_Identity=31.4432989690722, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1786874, Length=221, Percent_Identity=29.8642533936652, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI48994930, Length=94, Percent_Identity=39.3617021276596, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787087, Length=221, Percent_Identity=27.1493212669683, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32439; Mature: 32439

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7551042; 9384377 [H]