| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is pstS [H]
Identifier: 110635450
GI number: 110635450
Start: 3389466
End: 3390506
Strand: Reverse
Name: pstS [H]
Synonym: Meso_3121
Alternate gene names: 110635450
Gene position: 3390506-3389466 (Counterclockwise)
Preceding gene: 110635454
Following gene: 110635449
Centisome position: 76.84
GC content: 64.17
Gene sequence:
>1041_bases ATGAATAAGTATTTCCTTGCGGCAGCTGTGGCGTCCTCCGCCCTTGCCGCGTCGCTCGGCTTCGCCGCCGCGCAGTCGCG CGATACGATCCAGATCGCTGGGTCCTCGACTGTTCTTCCCTTCGCCAGCATCGTGGCCGAAGAGTTCGGCAACGCGTTTC CGGAGTTCAAGACGCCGGTCGTCGGCTCCGGCGGCTCGAGCGGCGGCCTGCGTCAGTTCTGCCAGGGCGTGGGTGAGAAC ACGATCGACATCGCCAATTCTTCGCGCCGCATCCGCGCTTCGGAAATCGAGGCCTGCAACCAGGCCGGCGTGAACCAGAT CCTGGAAATCCAGATCGGTTTCGACGGCATTGTCTTCGCGACCAGCGCCGACAAGGGCGATTTCGCGCTTGAGCCGGTTC ACGTCTTCAAGGCAGTAGCCGCCAAGGTCCCGGTGGAAGGCGAGATGGTCGACAATCCGTACAAGAGCTGGAGCGAGATC GACTCTTCGCTGCCAGATCAGCCGATCGCCGTCGCCATCCCGGCGTCCAACCACGGCACGCGCGAAGTGTTCGAGGAGAA GGTGCTGCACGCGGGCTGCGAAGCGGCCGAACTGCCGGAGATGGAAGAGGAGGCCATGGAGGCCGCCTGCACCGCCATCC GTCAGGACGTGGTCGTGGAGATCGCCGGCGACTACACCGAGACGCTGGCCCGCCTGCAGAGTAACCCGGACACGGTCGGC GTGTTCGGCCTGAGCTTCTACGACCAGAACCGCGATACGCTGAAGGTCGCCACCATGTCGGGCGTGACCCCGTCGCTCGA GACGATCGCTTCCGGTGAATACCCGGTCTCCCGCCCGCTGTATTTCTATGTGAAGGGCGAGCATATCGGCCAGGTTCCGG GCATCGAAGAGTATGTCGAGTTCTTCATGTCCGACCAGATGGCCGGTGCGGGCGGCACGCTCGAGGGCGCCGGCATGATC CCGCAGCCCGAGGAAAAGACCGCGGAAGTTGTGGACGCCTTCAAGGAGCGCAAGGCTCTGACCGCCGCCGACGTCCAGTA G
Upstream 100 bases:
>100_bases GGACCGACATTAAACTGTCATCGAACTGTTACACAGGGGCGTTAAGGCCTCTCCCGACGCGACAGGGCGTCAACACCGAA TTCCGGACAGGAGTAGCCAA
Downstream 100 bases:
>100_bases GACACATAAAATAGTGGGGAGTCTCTCAAGGCTCCCCACTTGACGGTTTCGGGTAGCATCGCGTTCCTTTGTTCATCCGT GCCGCGCGGGCGGCTACTGA
Product: phosphate ABC transporter periplasmic substrate-binding protein
Products: NA
Alternate protein names: PBP [H]
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MNKYFLAAAVASSALAASLGFAAAQSRDTIQIAGSSTVLPFASIVAEEFGNAFPEFKTPVVGSGGSSGGLRQFCQGVGEN TIDIANSSRRIRASEIEACNQAGVNQILEIQIGFDGIVFATSADKGDFALEPVHVFKAVAAKVPVEGEMVDNPYKSWSEI DSSLPDQPIAVAIPASNHGTREVFEEKVLHAGCEAAELPEMEEEAMEAACTAIRQDVVVEIAGDYTETLARLQSNPDTVG VFGLSFYDQNRDTLKVATMSGVTPSLETIASGEYPVSRPLYFYVKGEHIGQVPGIEEYVEFFMSDQMAGAGGTLEGAGMI PQPEEKTAEVVDAFKERKALTAADVQ
Sequences:
>Translated_346_residues MNKYFLAAAVASSALAASLGFAAAQSRDTIQIAGSSTVLPFASIVAEEFGNAFPEFKTPVVGSGGSSGGLRQFCQGVGEN TIDIANSSRRIRASEIEACNQAGVNQILEIQIGFDGIVFATSADKGDFALEPVHVFKAVAAKVPVEGEMVDNPYKSWSEI DSSLPDQPIAVAIPASNHGTREVFEEKVLHAGCEAAELPEMEEEAMEAACTAIRQDVVVEIAGDYTETLARLQSNPDTVG VFGLSFYDQNRDTLKVATMSGVTPSLETIASGEYPVSRPLYFYVKGEHIGQVPGIEEYVEFFMSDQMAGAGGTLEGAGMI PQPEEKTAEVVDAFKERKALTAADVQ >Mature_346_residues MNKYFLAAAVASSALAASLGFAAAQSRDTIQIAGSSTVLPFASIVAEEFGNAFPEFKTPVVGSGGSSGGLRQFCQGVGEN TIDIANSSRRIRASEIEACNQAGVNQILEIQIGFDGIVFATSADKGDFALEPVHVFKAVAAKVPVEGEMVDNPYKSWSEI DSSLPDQPIAVAIPASNHGTREVFEEKVLHAGCEAAELPEMEEEAMEAACTAIRQDVVVEIAGDYTETLARLQSNPDTVG VFGLSFYDQNRDTLKVATMSGVTPSLETIASGEYPVSRPLYFYVKGEHIGQVPGIEEYVEFFMSDQMAGAGGTLEGAGMI PQPEEKTAEVVDAFKERKALTAADVQ
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36708; Mature: 36708
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKYFLAAAVASSALAASLGFAAAQSRDTIQIAGSSTVLPFASIVAEEFGNAFPEFKTPV CCCEEEHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCE VGSGGSSGGLRQFCQGVGENTIDIANSSRRIRASEIEACNQAGVNQILEIQIGFDGIVFA ECCCCCCCHHHHHHHHCCCCEEEECCCCCCEEHHHHHHHHHHCCCEEEEEEECCCEEEEE TSADKGDFALEPVHVFKAVAAKVPVEGEMVDNPYKSWSEIDSSLPDQPIAVAIPASNHGT ECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCH REVFEEKVLHAGCEAAELPEMEEEAMEAACTAIRQDVVVEIAGDYTETLARLQSNPDTVG HHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCCCEEE VFGLSFYDQNRDTLKVATMSGVTPSLETIASGEYPVSRPLYFYVKGEHIGQVPGIEEYVE EEEEEEECCCCCEEEEEEECCCCCCHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHHH FFMSDQMAGAGGTLEGAGMIPQPEEKTAEVVDAFKERKALTAADVQ HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCC >Mature Secondary Structure MNKYFLAAAVASSALAASLGFAAAQSRDTIQIAGSSTVLPFASIVAEEFGNAFPEFKTPV CCCEEEHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCE VGSGGSSGGLRQFCQGVGENTIDIANSSRRIRASEIEACNQAGVNQILEIQIGFDGIVFA ECCCCCCCHHHHHHHHCCCCEEEECCCCCCEEHHHHHHHHHHCCCEEEEEEECCCEEEEE TSADKGDFALEPVHVFKAVAAKVPVEGEMVDNPYKSWSEIDSSLPDQPIAVAIPASNHGT ECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCH REVFEEKVLHAGCEAAELPEMEEEAMEAACTAIRQDVVVEIAGDYTETLARLQSNPDTVG HHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCCCEEE VFGLSFYDQNRDTLKVATMSGVTPSLETIASGEYPVSRPLYFYVKGEHIGQVPGIEEYVE EEEEEEECCCCCEEEEEEECCCCCCHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHHH FFMSDQMAGAGGTLEGAGMIPQPEEKTAEVVDAFKERKALTAADVQ HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA