Click here to switch to the map view.

The map label for this gene is 110635430

Identifier: 110635430

GI number: 110635430

Start: 3371706

End: 3372908

Strand: Reverse

Name: 110635430

Synonym: Meso_3101

Alternate gene names: NA

Gene position: 3372908-3371706 (Counterclockwise)

Preceding gene: 110635432

Following gene: 110635429

Centisome position: 76.44

GC content: 62.51

Gene sequence:

>1203_bases
ATGATCCGCACACTTTTGGCGACCACCGCGCTTGCCACCCTACTTGCAGGCGGTGCGATCGCCCAGCAAACGACCCCGCC
CACGACGGCCCCGTCGGCTGCGCCCGCCGAGAGCCAAACTCAGCAGATGGTGGTCCACGCTGAAGGGCATCTCGCGTCCA
ATATCATCGGAGAGGCTGTTTATAACAGCACAGGCGATGATGCAGAAGACATAGGCGATGTCAGCGATCTCGTGATCACC
AATGAAGGTCAGATCGAAGCTATCGTTGTCGGCGTCGGCGGGTTCCTTGGCATTGGGCAGAAAGATGTAGCCCTCGAATT
CAATCTGGCTCAATGGACCGATCAGCCGGATGGCGAACGCCGGCTCGTCGTGGAAACGACTGAGGATGCCCTGAGGGCGT
TGCCGGAATTCGATCGCTCAGCCTATGAGCCGATGCCGGCGGACGCACAGGTAGGCGAAACCACGCCTGCAACCGAGCAG
GACCTTGCAACGGCCCGCACTCAGGAAGAAGGGGCTGAAGGCGGAGAGACTGGCGGCGAAACCGCGATGGCTCCGGCAGA
CTCAGGTCAGGAAGGCGGCGAGGCTGGCGGTGAAACCGCAATGGCTCCGGCCGATTCAGGTCAGGAAAGCGGCGAAATGG
CTGCCGATCAAACCGAGCAAACCGGCGATCAGGCCGGTGGAGCCACGGGCGGCGCAGTAGCAACAGCTCCGGCGACCGGC
GCTGGCGATGATCAGCAGGCGCAGCAGCCGGCCGATCAGCAGGCGCAGCAGGAGCGGCCCGCTGACCAGCAGACCGCCCA
AGACAATCAGATGGGTGCCGGCGAGGCCGCTACCGACCAGACGCAGACCGGCGCCATTGACCGCAGCACTATGCAGCAAG
CCACGCCTGACCAGTTGACGGCCGAGACGCTTGTCGGAACCACCGTCTACGGCGCCAATGAGGAGAATATTGGCGAGATC
GGCGACGTCGCCCTCACCCCCGAAGGCCAGGTGGATGCGGTGATCGTGGATGTCGGCGGGTTCCTAGGCGTCGGCGAGAA
ACAGGTCGCGATCGGCATGGACGACCTCAATTTCATGGCCGATGAAGATGGCGATCTGTACCTGTTCACGAATTTCACGC
AGGAACAGCTCGAGGCGCAGCCCGCTTACGATGAGGCTTCCTACGCGGAAAACCGTGACGAAATGCGCTTGCAGGCGCAG
TAA

Upstream 100 bases:

>100_bases
GCACGTTGTAGAAATGTGGTGGCCGCACACCCGCTCCTCACTGCCAGGTTCGGTCGGATGCGCGGCCATGTACAGCAAAA
CTGCACATGGAGAGCTTAAC

Downstream 100 bases:

>100_bases
GACCGTTTCGCTCTTGCGACGCTTGGAAAGGCCCCGTCAACGGGGCCTTTTCATTTTCGCGGAGCATCGTTTCTATCGGG
AAGACAGTGCATCTTCCATA

Product: PRC-barrel

Products: NA

Alternate protein names: PRC-Barrel Domain Protein; PRC-Barrel; PRC Family Protein; PRC Protein

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MIRTLLATTALATLLAGGAIAQQTTPPTTAPSAAPAESQTQQMVVHAEGHLASNIIGEAVYNSTGDDAEDIGDVSDLVIT
NEGQIEAIVVGVGGFLGIGQKDVALEFNLAQWTDQPDGERRLVVETTEDALRALPEFDRSAYEPMPADAQVGETTPATEQ
DLATARTQEEGAEGGETGGETAMAPADSGQEGGEAGGETAMAPADSGQESGEMAADQTEQTGDQAGGATGGAVATAPATG
AGDDQQAQQPADQQAQQERPADQQTAQDNQMGAGEAATDQTQTGAIDRSTMQQATPDQLTAETLVGTTVYGANEENIGEI
GDVALTPEGQVDAVIVDVGGFLGVGEKQVAIGMDDLNFMADEDGDLYLFTNFTQEQLEAQPAYDEASYAENRDEMRLQAQ

Sequences:

>Translated_400_residues
MIRTLLATTALATLLAGGAIAQQTTPPTTAPSAAPAESQTQQMVVHAEGHLASNIIGEAVYNSTGDDAEDIGDVSDLVIT
NEGQIEAIVVGVGGFLGIGQKDVALEFNLAQWTDQPDGERRLVVETTEDALRALPEFDRSAYEPMPADAQVGETTPATEQ
DLATARTQEEGAEGGETGGETAMAPADSGQEGGEAGGETAMAPADSGQESGEMAADQTEQTGDQAGGATGGAVATAPATG
AGDDQQAQQPADQQAQQERPADQQTAQDNQMGAGEAATDQTQTGAIDRSTMQQATPDQLTAETLVGTTVYGANEENIGEI
GDVALTPEGQVDAVIVDVGGFLGVGEKQVAIGMDDLNFMADEDGDLYLFTNFTQEQLEAQPAYDEASYAENRDEMRLQAQ
>Mature_400_residues
MIRTLLATTALATLLAGGAIAQQTTPPTTAPSAAPAESQTQQMVVHAEGHLASNIIGEAVYNSTGDDAEDIGDVSDLVIT
NEGQIEAIVVGVGGFLGIGQKDVALEFNLAQWTDQPDGERRLVVETTEDALRALPEFDRSAYEPMPADAQVGETTPATEQ
DLATARTQEEGAEGGETGGETAMAPADSGQEGGEAGGETAMAPADSGQESGEMAADQTEQTGDQAGGATGGAVATAPATG
AGDDQQAQQPADQQAQQERPADQQTAQDNQMGAGEAATDQTQTGAIDRSTMQQATPDQLTAETLVGTTVYGANEENIGEI
GDVALTPEGQVDAVIVDVGGFLGVGEKQVAIGMDDLNFMADEDGDLYLFTNFTQEQLEAQPAYDEASYAENRDEMRLQAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41273; Mature: 41273

Theoretical pI: Translated: 3.40; Mature: 3.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTLLATTALATLLAGGAIAQQTTPPTTAPSAAPAESQTQQMVVHAEGHLASNIIGEAV
CHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCHHHHEEEEEECCCHHHHHHHHHH
YNSTGDDAEDIGDVSDLVITNEGQIEAIVVGVGGFLGIGQKDVALEFNLAQWTDQPDGER
HCCCCCCHHHHCCCHHEEEECCCCEEEEEEECCHHHCCCCCCEEEEEEHHHCCCCCCCCC
RLVVETTEDALRALPEFDRSAYEPMPADAQVGETTPATEQDLATARTQEEGAEGGETGGE
EEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
TAMAPADSGQEGGEAGGETAMAPADSGQESGEMAADQTEQTGDQAGGATGGAVATAPATG
CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCC
AGDDQQAQQPADQQAQQERPADQQTAQDNQMGAGEAATDQTQTGAIDRSTMQQATPDQLT
CCCCHHHHCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHH
AETLVGTTVYGANEENIGEIGDVALTPEGQVDAVIVDVGGFLGVGEKQVAIGMDDLNFMA
HHHHHCEEEECCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCEEEEECCCCHHEE
DEDGDLYLFTNFTQEQLEAQPAYDEASYAENRDEMRLQAQ
CCCCCEEEEECCCHHHHHCCCCCCCHHHHCCCCCEEEECC
>Mature Secondary Structure
MIRTLLATTALATLLAGGAIAQQTTPPTTAPSAAPAESQTQQMVVHAEGHLASNIIGEAV
CHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCHHHHEEEEEECCCHHHHHHHHHH
YNSTGDDAEDIGDVSDLVITNEGQIEAIVVGVGGFLGIGQKDVALEFNLAQWTDQPDGER
HCCCCCCHHHHCCCHHEEEECCCCEEEEEEECCHHHCCCCCCEEEEEEHHHCCCCCCCCC
RLVVETTEDALRALPEFDRSAYEPMPADAQVGETTPATEQDLATARTQEEGAEGGETGGE
EEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
TAMAPADSGQEGGEAGGETAMAPADSGQESGEMAADQTEQTGDQAGGATGGAVATAPATG
CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCC
AGDDQQAQQPADQQAQQERPADQQTAQDNQMGAGEAATDQTQTGAIDRSTMQQATPDQLT
CCCCHHHHCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHH
AETLVGTTVYGANEENIGEIGDVALTPEGQVDAVIVDVGGFLGVGEKQVAIGMDDLNFMA
HHHHHCEEEECCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCEEEEECCCCHHEE
DEDGDLYLFTNFTQEQLEAQPAYDEASYAENRDEMRLQAQ
CCCCCEEEEECCCHHHHHCCCCCCCHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA