| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is mhqD [H]
Identifier: 110635428
GI number: 110635428
Start: 3369949
End: 3370581
Strand: Reverse
Name: mhqD [H]
Synonym: Meso_3099
Alternate gene names: 110635428
Gene position: 3370581-3369949 (Counterclockwise)
Preceding gene: 110635429
Following gene: 110635427
Centisome position: 76.39
GC content: 62.4
Gene sequence:
>633_bases ATGGGGATCGATGCCTACAGGCATTTCTCGGCGCCGGCCGGTCCCGGCCGGCCCCTTCTGTTTCTCTTTCACGGGACCGG CGGGGATGAGCGCCAGCTCCTCCCGCTTGCGCGCGAGGTGGCTCCTTGGGCGGGGATTATCGCTCCTCTCGGGGATGTGA GCGAACACGGAGCGCCCCGTTTCTTCCGCCGCACTGGCGAGGGCGTCTACGATATGGCGGATCTTGCCCGCGCCACGGAA AAAATGGTGAGCTTCGTTCGCGCGCATGTGGCGGCCGAAAAGCCCGGTGCCGTGCTCGGCCTCGGCTATTCAAATGGGGC GAATATTCTCGCCACAACTATTTTCAGCAATCCTTCGCTTTTCGACGCTGCAGTGCTGATGCATCCCCTCATCCCCTTTG AGCCTCGTTTCGGCTCGGACAGCGTGGAAATCAGGCTTCTGATCACGGCAGGGCGGCATGATCCGGTCTGTCCTGCGCCG CTGACGAACAGGCTTGCCTCATACCTGGAAGCAGCCGGCGCTGCGAGCGAGATCGTCTGGCACGAAGGCGGCCACGAGCT GCGCTCGAACGAGATTGACGCGACGCGGGATTTCTTTTCCGCCTACGGTGATCCTCGGGAAAAAACGCGATGA
Upstream 100 bases:
>100_bases GGACATGGATCATCTAGGCGAGGCCCTGAAACTGCCGCGCCAGCATGAGCACCTGCGCCCCTATCTTGAGGCGCGCCTGC CGGCGATCGGGAGCTGAACC
Downstream 100 bases:
>100_bases AGGAACCGCATATCAAGCTTCACGAAGCCGGCAGCAAAGGCCGTTACGTTCATGCGGCCGATGGCAAAGAAGCGCAGATG ACCTTCACCAGAATCGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MGIDAYRHFSAPAGPGRPLLFLFHGTGGDERQLLPLAREVAPWAGIIAPLGDVSEHGAPRFFRRTGEGVYDMADLARATE KMVSFVRAHVAAEKPGAVLGLGYSNGANILATTIFSNPSLFDAAVLMHPLIPFEPRFGSDSVEIRLLITAGRHDPVCPAP LTNRLASYLEAAGAASEIVWHEGGHELRSNEIDATRDFFSAYGDPREKTR
Sequences:
>Translated_210_residues MGIDAYRHFSAPAGPGRPLLFLFHGTGGDERQLLPLAREVAPWAGIIAPLGDVSEHGAPRFFRRTGEGVYDMADLARATE KMVSFVRAHVAAEKPGAVLGLGYSNGANILATTIFSNPSLFDAAVLMHPLIPFEPRFGSDSVEIRLLITAGRHDPVCPAP LTNRLASYLEAAGAASEIVWHEGGHELRSNEIDATRDFFSAYGDPREKTR >Mature_209_residues GIDAYRHFSAPAGPGRPLLFLFHGTGGDERQLLPLAREVAPWAGIIAPLGDVSEHGAPRFFRRTGEGVYDMADLARATEK MVSFVRAHVAAEKPGAVLGLGYSNGANILATTIFSNPSLFDAAVLMHPLIPFEPRFGSDSVEIRLLITAGRHDPVCPAPL TNRLASYLEAAGAASEIVWHEGGHELRSNEIDATRDFFSAYGDPREKTR
Specific function: Putative hydrolase that may contribute to the degradation of aromatic compounds (Potential) [H]
COG id: COG0400
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003140 [H]
Pfam domain/function: PF02230 Abhydrolase_2 [H]
EC number: NA
Molecular weight: Translated: 22692; Mature: 22561
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIDAYRHFSAPAGPGRPLLFLFHGTGGDERQLLPLAREVAPWAGIIAPLGDVSEHGAPR CCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCHHHHHHCCCCHHHCCCCH FFRRTGEGVYDMADLARATEKMVSFVRAHVAAEKPGAVLGLGYSNGANILATTIFSNPSL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCH FDAAVLMHPLIPFEPRFGSDSVEIRLLITAGRHDPVCPAPLTNRLASYLEAAGAASEIVW HHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHEEE HEGGHELRSNEIDATRDFFSAYGDPREKTR CCCCCHHCCCCCHHHHHHHHHCCCCHHCCC >Mature Secondary Structure GIDAYRHFSAPAGPGRPLLFLFHGTGGDERQLLPLAREVAPWAGIIAPLGDVSEHGAPR CCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCHHHHHHCCCCHHHCCCCH FFRRTGEGVYDMADLARATEKMVSFVRAHVAAEKPGAVLGLGYSNGANILATTIFSNPSL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCH FDAAVLMHPLIPFEPRFGSDSVEIRLLITAGRHDPVCPAPLTNRLASYLEAAGAASEIVW HHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHEEE HEGGHELRSNEIDATRDFFSAYGDPREKTR CCCCCHHCCCCCHHHHHHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9734814; 9384377 [H]