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The map label for this gene is 110635353

Identifier: 110635353

GI number: 110635353

Start: 3297813

End: 3298370

Strand: Reverse

Name: 110635353

Synonym: Meso_3024

Alternate gene names: NA

Gene position: 3298370-3297813 (Counterclockwise)

Preceding gene: 110635354

Following gene: 110635350

Centisome position: 74.75

GC content: 58.6

Gene sequence:

>558_bases
GTGACGATCGCTATATCGCCGGACGGCATGCCCGCGCTGGTGCTCAATGCGGACTATCGCCCGCTAAGCTATTATCCCCT
GTCGCTGTGGTCGTGGCAGGACGCCGTCAAGGCCGTGTTTCTCGACCGGGTCAATATCGTTGCCGAGTACGAGCAGGCTA
TCTCGTCTCCGTCCTTTACGATGCGGCTTCCGAGTGTCGTCAGCCTCAAGACCTATGTGAAGCCGTCGCGCTATCCGGCC
TTTACGCGATTCAACGTGTTCTTGCGTGACCGCTTCCAGTGCCAATATTGCGGCACGCGGGAGGAGCTTACCTTCGACCA
TGTGGTCCCACGCCGGCATGGCGGCGTCACCTCGTGGGAAAATGTGGTCGCCGCCTGCTCTCCCTGCAATCTGAGGAAGG
GCGGGCTCATGCCCGATCAGGCCAAGATGTGGCCACAACAAAAACCCTACCGGCCGACGGTCCACGATCTGCATAATAAT
GGGCGGCTTTTCCCGCCCAATTATTTGCATGAGAGCTGGATGGATTATCTATACTGGGACGTCGAGCTGGAGCCGTAA

Upstream 100 bases:

>100_bases
GGTTTGGCCTATCGGAACTACAATACCGGCTTCACATTCCTGTCACTGCGGGATTACATTATCCGCGCCGATCGATCTGC
CTAGCAGGAGCCATGAGGAC

Downstream 100 bases:

>100_bases
GCCCGGCGCCCCCCCCCCCGCATCAGGACAATACAGTCCCTGTCAGCGCTTCAGCGCGCCGCGCAGTGCAATTACGGCAA
GAATGGCGCTGGCGATGACA

Product: HNH endonuclease

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; HNH Endonuclease Domain Protein; HNH Endonuclease Domain-Containing Protein; Restriction Endonuclease; Hnh Endonuclease; HNH Nuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Nuclease; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MTIAISPDGMPALVLNADYRPLSYYPLSLWSWQDAVKAVFLDRVNIVAEYEQAISSPSFTMRLPSVVSLKTYVKPSRYPA
FTRFNVFLRDRFQCQYCGTREELTFDHVVPRRHGGVTSWENVVAACSPCNLRKGGLMPDQAKMWPQQKPYRPTVHDLHNN
GRLFPPNYLHESWMDYLYWDVELEP

Sequences:

>Translated_185_residues
MTIAISPDGMPALVLNADYRPLSYYPLSLWSWQDAVKAVFLDRVNIVAEYEQAISSPSFTMRLPSVVSLKTYVKPSRYPA
FTRFNVFLRDRFQCQYCGTREELTFDHVVPRRHGGVTSWENVVAACSPCNLRKGGLMPDQAKMWPQQKPYRPTVHDLHNN
GRLFPPNYLHESWMDYLYWDVELEP
>Mature_184_residues
TIAISPDGMPALVLNADYRPLSYYPLSLWSWQDAVKAVFLDRVNIVAEYEQAISSPSFTMRLPSVVSLKTYVKPSRYPAF
TRFNVFLRDRFQCQYCGTREELTFDHVVPRRHGGVTSWENVVAACSPCNLRKGGLMPDQAKMWPQQKPYRPTVHDLHNNG
RLFPPNYLHESWMDYLYWDVELEP

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21522; Mature: 21391

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIAISPDGMPALVLNADYRPLSYYPLSLWSWQDAVKAVFLDRVNIVAEYEQAISSPSFT
CEEEECCCCCEEEEEECCCCCCEECCEEHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
MRLPSVVSLKTYVKPSRYPAFTRFNVFLRDRFQCQYCGTREELTFDHVVPRRHGGVTSWE
EECCCCEEHHHHCCCCCCCCEEEEEEEEECCEEEEECCCCCCCCHHHCCCCCCCCCCCHH
NVVAACSPCNLRKGGLMPDQAKMWPQQKPYRPTVHDLHNNGRLFPPNYLHESWMDYLYWD
HHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHEEEE
VELEP
EEECC
>Mature Secondary Structure 
TIAISPDGMPALVLNADYRPLSYYPLSLWSWQDAVKAVFLDRVNIVAEYEQAISSPSFT
EEEECCCCCEEEEEECCCCCCEECCEEHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
MRLPSVVSLKTYVKPSRYPAFTRFNVFLRDRFQCQYCGTREELTFDHVVPRRHGGVTSWE
EECCCCEEHHHHCCCCCCCCEEEEEEEEECCEEEEECCCCCCCCHHHCCCCCCCCCCCHH
NVVAACSPCNLRKGGLMPDQAKMWPQQKPYRPTVHDLHNNGRLFPPNYLHESWMDYLYWD
HHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHEEEE
VELEP
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA