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The map label for this gene is bsdB [H]

Identifier: 110635257

GI number: 110635257

Start: 3184042

End: 3184635

Strand: Reverse

Name: bsdB [H]

Synonym: Meso_2928

Alternate gene names: 110635257

Gene position: 3184635-3184042 (Counterclockwise)

Preceding gene: 110635258

Following gene: 110635256

Centisome position: 72.17

GC content: 56.73

Gene sequence:

>594_bases
GTGGCTCATCCTAGGATGATTGTCGGGATTAGCGGTGCTTCGGGAGCCATTTACGGCCTTCGGTGCCTCGAGCTGTTGCG
TGACCTTGGGGTCGAAACGCATCTCATAGTTTCAAAAAGCGCTGTGCTGACCATTGAGCAGGAGCTCAATATGAAAGCTG
CGAACTTCAGGAAACTTGCAAGCTATTGCCATGCGCCTGGCAATATTGGTGCGGTTTGTGCGAGCGGATCGTTTCAAACG
CTTGGCATGGTCGTAGCGCCGTGTTCCATGCGCAGCCTTGCTGAGATCGCCGTTGGTGTAACCTCCAGCCTGTTGACGCG
GGCAGCCGAGGTGGTGCTCAAGGAACGCCGGCGGCTGGTGCTGTTGGCGCGTGAAGCGCCGCTGACCTTGACGCATCTGC
GGAACATGACGGTCGTCACTGAAATGGGCGGCATCATACTGCCACCGGTTCCCGCATTTTACACTCACCCGAAGTCACTC
AACGAGATGGTGGATCATACAATCGGTCGGACTCTCGATCTCTTCGGCCTCGACACTGGAAAGCTGAAGCGGTGGGAGGG
GCTGAAAGGACCCGTCACACAAATCTCCGACTAG

Upstream 100 bases:

>100_bases
GGCTCGGCCATTGAACAGCAGCTCCAGAATGCTTGCAGAATGCGTACACTCTGGCAGTACCAGAAATGTCTCGCATGAAA
CCACTTGGGGGATGTTGGGT

Downstream 100 bases:

>100_bases
AACCAACGAGGCTGAATGGCAGCCATTTCGCCAATTAAGACGACGTCTTATTGTTAGACATCTTCTGTTGCATTTGGAGT
GCACAAATGAAAGTTATCAT

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: NA

Alternate protein names: PAD; 4-hydroxybenzoate decarboxylase subunit B; 4-hydroxybenzoate DC; Phenylacrylic acid decarboxylase subunit B; Vanillate decarboxylase subunit B [H]

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MAHPRMIVGISGASGAIYGLRCLELLRDLGVETHLIVSKSAVLTIEQELNMKAANFRKLASYCHAPGNIGAVCASGSFQT
LGMVVAPCSMRSLAEIAVGVTSSLLTRAAEVVLKERRRLVLLAREAPLTLTHLRNMTVVTEMGGIILPPVPAFYTHPKSL
NEMVDHTIGRTLDLFGLDTGKLKRWEGLKGPVTQISD

Sequences:

>Translated_197_residues
MAHPRMIVGISGASGAIYGLRCLELLRDLGVETHLIVSKSAVLTIEQELNMKAANFRKLASYCHAPGNIGAVCASGSFQT
LGMVVAPCSMRSLAEIAVGVTSSLLTRAAEVVLKERRRLVLLAREAPLTLTHLRNMTVVTEMGGIILPPVPAFYTHPKSL
NEMVDHTIGRTLDLFGLDTGKLKRWEGLKGPVTQISD
>Mature_196_residues
AHPRMIVGISGASGAIYGLRCLELLRDLGVETHLIVSKSAVLTIEQELNMKAANFRKLASYCHAPGNIGAVCASGSFQTL
GMVVAPCSMRSLAEIAVGVTSSLLTRAAEVVLKERRRLVLLAREAPLTLTHLRNMTVVTEMGGIILPPVPAFYTHPKSLN
EMVDHTIGRTLDLFGLDTGKLKRWEGLKGPVTQISD

Specific function: Part of the BsdBCD complex involved in the decarboxylation and detoxification of phenolic derivatives under both aerobic and anaerobic conditions. It is able to catalyze the reversible decarboxylation of 4-hydroxybenzoate, vanillate and salicylate. Is not

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=186, Percent_Identity=51.6129032258064, Blast_Score=189, Evalue=1e-49,
Organism=Saccharomyces cerevisiae, GI6320746, Length=186, Percent_Identity=46.2365591397849, Blast_Score=187, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: =4.1.1.61 [H]

Molecular weight: Translated: 21230; Mature: 21099

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHPRMIVGISGASGAIYGLRCLELLRDLGVETHLIVSKSAVLTIEQELNMKAANFRKLA
CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCEEEEEHHHCCCCHHHHHHHH
SYCHAPGNIGAVCASGSFQTLGMVVAPCSMRSLAEIAVGVTSSLLTRAAEVVLKERRRLV
HHHCCCCCCEEEEECCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
LLAREAPLTLTHLRNMTVVTEMGGIILPPVPAFYTHPKSLNEMVDHTIGRTLDLFGLDTG
EEECCCCEEHHHHCCEEEEECCCCEECCCCCCHHCCCHHHHHHHHHHHCCEEEEEECCCC
KLKRWEGLKGPVTQISD
CCHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AHPRMIVGISGASGAIYGLRCLELLRDLGVETHLIVSKSAVLTIEQELNMKAANFRKLA
CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCEEEEEHHHCCCCHHHHHHHH
SYCHAPGNIGAVCASGSFQTLGMVVAPCSMRSLAEIAVGVTSSLLTRAAEVVLKERRRLV
HHHCCCCCCEEEEECCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
LLAREAPLTLTHLRNMTVVTEMGGIILPPVPAFYTHPKSLNEMVDHTIGRTLDLFGLDTG
EEECCCCEEHHHHCCEEEEECCCCEECCCCCCHHCCCHHHHHHHHHHHCCEEEEEECCCC
KLKRWEGLKGPVTQISD
CCHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]