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The map label for this gene is 110635251

Identifier: 110635251

GI number: 110635251

Start: 3175699

End: 3176100

Strand: Reverse

Name: 110635251

Synonym: Meso_2922

Alternate gene names: NA

Gene position: 3176100-3175699 (Counterclockwise)

Preceding gene: 110635252

Following gene: 110635250

Centisome position: 71.98

GC content: 57.46

Gene sequence:

>402_bases
ATGAGCCCCATGAAGATCAGTCGGACCTTTCGATTAGTCAGCGTTCTCGTGGCCATGGTTTATACGAGTGGCCCGGCGTT
TGCCGAAGGCGACGCGGTGGCTGGCAAGGCGGTGTTCGAGAAGAACTGCCAAGTGTGCCACGAGGCGGAAAAGATGCGCA
ACGGCGCCGGGCCTTACCTGCTGGGTGTTGTCGGCAGGCCGGCGGCCTCCACAGACTTTCCCCGGTACAGCCAAGCGCTC
AAGGATTCAGGAATTGTCTGGGATCCCGAAAATATCAGTGCCTTCATAAGTGGCCCGAAGGCATTCGTGCCTGGCACTAG
GATGTTCTTCACTGGCCTTAAGACCGAGGAGGAGATCGCCAATGTTGTGGCCTATCTCGTTGAAGTGTCCAAGGCCAAGT
AG

Upstream 100 bases:

>100_bases
CACCGCCTGGAAGAAATTGCAGTTTCCAAAGCAGACTCGCCGAATAGCGGCCGCGCAATCACTGAAAAAATGCGCGGAGT
CGTAGGGCGTCAATGTTGAG

Downstream 100 bases:

>100_bases
CCGGGCCAGATGAGCGGTTCTGTCCGTGGTCGCCGCGACTTGCTGCCGCCGTCGATAAGACAATGACAAGGGAATTTCTG
GGAGGAAGTAAAATGAGGAT

Product: cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MSPMKISRTFRLVSVLVAMVYTSGPAFAEGDAVAGKAVFEKNCQVCHEAEKMRNGAGPYLLGVVGRPAASTDFPRYSQAL
KDSGIVWDPENISAFISGPKAFVPGTRMFFTGLKTEEEIANVVAYLVEVSKAK

Sequences:

>Translated_133_residues
MSPMKISRTFRLVSVLVAMVYTSGPAFAEGDAVAGKAVFEKNCQVCHEAEKMRNGAGPYLLGVVGRPAASTDFPRYSQAL
KDSGIVWDPENISAFISGPKAFVPGTRMFFTGLKTEEEIANVVAYLVEVSKAK
>Mature_132_residues
SPMKISRTFRLVSVLVAMVYTSGPAFAEGDAVAGKAVFEKNCQVCHEAEKMRNGAGPYLLGVVGRPAASTDFPRYSQALK
DSGIVWDPENISAFISGPKAFVPGTRMFFTGLKTEEEIANVVAYLVEVSKAK

Specific function: Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=102, Percent_Identity=36.2745098039216, Blast_Score=83, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17566554, Length=111, Percent_Identity=38.7387387387387, Blast_Score=93, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17539604, Length=104, Percent_Identity=38.4615384615385, Blast_Score=85, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6320796, Length=107, Percent_Identity=32.7102803738318, Blast_Score=80, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6322508, Length=101, Percent_Identity=34.6534653465347, Blast_Score=77, Evalue=7e-16,
Organism=Drosophila melanogaster, GI17137204, Length=101, Percent_Identity=37.6237623762376, Blast_Score=80, Evalue=4e-16,
Organism=Drosophila melanogaster, GI17137228, Length=103, Percent_Identity=34.9514563106796, Blast_Score=77, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 14324; Mature: 14192

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPMKISRTFRLVSVLVAMVYTSGPAFAEGDAVAGKAVFEKNCQVCHEAEKMRNGAGPYL
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LGVVGRPAASTDFPRYSQALKDSGIVWDPENISAFISGPKAFVPGTRMFFTGLKTEEEIA
EEECCCCCCCCCCHHHHHHHHCCCCEECCCCCEEEECCCCCCCCCCHHHHCCCCCHHHHH
NVVAYLVEVSKAK
HHHHHHHHHHCCC
>Mature Secondary Structure 
SPMKISRTFRLVSVLVAMVYTSGPAFAEGDAVAGKAVFEKNCQVCHEAEKMRNGAGPYL
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LGVVGRPAASTDFPRYSQALKDSGIVWDPENISAFISGPKAFVPGTRMFFTGLKTEEEIA
EEECCCCCCCCCCHHHHHHHHCCCCEECCCCCEEEECCCCCCCCCCHHHHCCCCCHHHHH
NVVAYLVEVSKAK
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 174109 [H]