| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110635229
Identifier: 110635229
GI number: 110635229
Start: 3149975
End: 3150376
Strand: Reverse
Name: 110635229
Synonym: Meso_2898
Alternate gene names: NA
Gene position: 3150376-3149975 (Counterclockwise)
Preceding gene: 110635230
Following gene: 110635227
Centisome position: 71.4
GC content: 56.47
Gene sequence:
>402_bases ATGAGCGTTCTTGTTCGGTGGCGGTCCCTGGCAATATCTGCATCTCTAGCGGGAACGGTTGCTCTAGCCGCATCGTCCGT AAATGCGCATCATTCGTTCGCCATGTTCGACCAGGCAAACCCAGTTGAACTCAAAGGCGTCGTGAAGTCGTGGGAATTCG TAAACCCGCATAGCTGGCTCGTAATGACAGTGCAGCGTGAGGGCCAAGCGGTGGATTTCGCTATTGAAGGCTCCAGCGTG AACACGTTGGTTCGCCAAGGCTTTCACAACGAGAGTTTTATGCCGGGTGAGGAAGTGACCGTAGTGCTTAGTCCTTTGAG GGACGGACGGCGAGGCGGTGCGTTCGTCCGGGCCACGAAGGCCGACGGCACTACTCTGAGCATGTCACCGACGCCGAATT GA
Upstream 100 bases:
>100_bases CAAATTTATTCATGTCTAACTATGTTGACATCTTATTTTGGTAAATATAGTTATCAGCATAGAATCTATCAACAATTACA AACTGTTTTGAGGAGGAGTT
Downstream 100 bases:
>100_bases TCGTCTGAATAGGCAGCGAATAGTTCGATAGGCGCTTAGGGGGAGGCACCTGATCCTCGCACTGAATGGGGTGCCGGTTT CTGAGGCGGGGCATAAGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSVLVRWRSLAISASLAGTVALAASSVNAHHSFAMFDQANPVELKGVVKSWEFVNPHSWLVMTVQREGQAVDFAIEGSSV NTLVRQGFHNESFMPGEEVTVVLSPLRDGRRGGAFVRATKADGTTLSMSPTPN
Sequences:
>Translated_133_residues MSVLVRWRSLAISASLAGTVALAASSVNAHHSFAMFDQANPVELKGVVKSWEFVNPHSWLVMTVQREGQAVDFAIEGSSV NTLVRQGFHNESFMPGEEVTVVLSPLRDGRRGGAFVRATKADGTTLSMSPTPN >Mature_132_residues SVLVRWRSLAISASLAGTVALAASSVNAHHSFAMFDQANPVELKGVVKSWEFVNPHSWLVMTVQREGQAVDFAIEGSSVN TLVRQGFHNESFMPGEEVTVVLSPLRDGRRGGAFVRATKADGTTLSMSPTPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14313; Mature: 14182
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLVRWRSLAISASLAGTVALAASSVNAHHSFAMFDQANPVELKGVVKSWEFVNPHSWL CCEEEEEEEEEEECCCCCEEEEEECCCCCCCEEEEECCCCCEEEEEEECCCEEECCCCEE VMTVQREGQAVDFAIEGSSVNTLVRQGFHNESFMPGEEVTVVLSPLRDGRRGGAFVRATK EEEEECCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEC ADGTTLSMSPTPN CCCCEEECCCCCC >Mature Secondary Structure SVLVRWRSLAISASLAGTVALAASSVNAHHSFAMFDQANPVELKGVVKSWEFVNPHSWL CEEEEEEEEEEECCCCCEEEEEECCCCCCCEEEEECCCCCEEEEEEECCCEEECCCCEE VMTVQREGQAVDFAIEGSSVNTLVRQGFHNESFMPGEEVTVVLSPLRDGRRGGAFVRATK EEEEECCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEC ADGTTLSMSPTPN CCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA