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The map label for this gene is zntR [C]

Identifier: 110635181

GI number: 110635181

Start: 3097069

End: 3097497

Strand: Reverse

Name: zntR [C]

Synonym: Meso_2848

Alternate gene names: 110635181

Gene position: 3097497-3097069 (Counterclockwise)

Preceding gene: 110635183

Following gene: 110635180

Centisome position: 70.2

GC content: 59.67

Gene sequence:

>429_bases
ATGAGCGCACGCGATATCTCGATCGGTGAGGCTGCCCGGCAGAGCGGCGTCAAAGTGCCCACAATCCGGTTTTACGAGCA
GATCGGGCTTCTGCCGGAACCCCCGCGTAGTAAGGGCAACCGAAGGCAATATGACGAAAGAGATCTCAGCCGGCTTGCCT
TCATCCGCCATGCGCGCGAACTGGGTTTCGAGGTCGCCGATATTCGGGAGCTTCTGACACTGACGGAGCGCCCCCAGAGC
TCTTGCCATGAGGCCGATAGCATAGCCGTAAGGCATCTAAGGGAGACGGAAGAGAGGATAGCCAAGCTGCAGTCGCTCCG
GCGCGAACTGAAACGCATGGTCGAGGAGTGTGGACACGGCAAGGTATGCGAGTGCCGCGTCATACAGGTGCTTGCCGACC
ACAACAGGTGCCAAGGCGACGCTCACTAA

Upstream 100 bases:

>100_bases
TGGAAGCGGCTATTGCCTGCGGTTTCGGCCATGAACGTCTCCTTGATCTCGCTTCAGTCCAGGCTTACTTCCTCTAGTGA
CTATAGGAGCAAGAGAAAAA

Downstream 100 bases:

>100_bases
GTGCGTATGCAGACGTGCCGCATAAGAAGGGGACGTTGCATAAACGCAACGGTTTGGCCTGCTCTCAAGTTGCCTAGGCA
GCCGCCATGTTAATAAACTG

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MSARDISIGEAARQSGVKVPTIRFYEQIGLLPEPPRSKGNRRQYDERDLSRLAFIRHARELGFEVADIRELLTLTERPQS
SCHEADSIAVRHLRETEERIAKLQSLRRELKRMVEECGHGKVCECRVIQVLADHNRCQGDAH

Sequences:

>Translated_142_residues
MSARDISIGEAARQSGVKVPTIRFYEQIGLLPEPPRSKGNRRQYDERDLSRLAFIRHARELGFEVADIRELLTLTERPQS
SCHEADSIAVRHLRETEERIAKLQSLRRELKRMVEECGHGKVCECRVIQVLADHNRCQGDAH
>Mature_141_residues
SARDISIGEAARQSGVKVPTIRFYEQIGLLPEPPRSKGNRRQYDERDLSRLAFIRHARELGFEVADIRELLTLTERPQSS
CHEADSIAVRHLRETEERIAKLQSLRRELKRMVEECGHGKVCECRVIQVLADHNRCQGDAH

Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789687, Length=128, Percent_Identity=42.1875, Blast_Score=95, Evalue=2e-21,
Organism=Escherichia coli, GI1786695, Length=127, Percent_Identity=30.7086614173228, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011789
- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 16343; Mature: 16212

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: PS00552 HTH_MERR_1 ; PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARDISIGEAARQSGVKVPTIRFYEQIGLLPEPPRSKGNRRQYDERDLSRLAFIRHARE
CCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LGFEVADIRELLTLTERPQSSCHEADSIAVRHLRETEERIAKLQSLRRELKRMVEECGHG
HCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KVCECRVIQVLADHNRCQGDAH
CCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SARDISIGEAARQSGVKVPTIRFYEQIGLLPEPPRSKGNRRQYDERDLSRLAFIRHARE
CCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LGFEVADIRELLTLTERPQSSCHEADSIAVRHLRETEERIAKLQSLRRELKRMVEECGHG
HCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KVCECRVIQVLADHNRCQGDAH
CCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]