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The map label for this gene is 110635173

Identifier: 110635173

GI number: 110635173

Start: 3089375

End: 3089995

Strand: Reverse

Name: 110635173

Synonym: Meso_2840

Alternate gene names: NA

Gene position: 3089995-3089375 (Counterclockwise)

Preceding gene: 110635174

Following gene: 110635169

Centisome position: 70.03

GC content: 62.48

Gene sequence:

>621_bases
ATGGATTTTCCGGAGTCCAAACACGTAAAGCTCAAGACGCTCGATGCGGTGCGCGAGGACGCGCAGGATTGTACGCGTTG
CGACCTCTACAAGAATGCCACGCAGACTGTGTTCGGCGAGGGCGGCAACCAGGCGCGCGTGGTATTTGTCGGCGAGCAGC
CAGGCGATAAGGAGGACGTGGAGGGCCGGCCCTTCGTGGGGCCGGCAGGCCGGATGTTCGATGCCATTCTGGAGGAAGTG
GGCATCGACCGGAAGAAGACCTATGTCACCAATGCGGTGAAGCATTTCAAGTTCGAGCTACGGGGCAAGCGCCGCATTCA
TTCCAAGCCGAATGCTGGCGAAATCCGCGCCTGCCGCTGGTGGCTCGACCAGGAATTGACACTGATCCAGCCGGATGTGG
CGGTTGCTCTTGGCGCCACAGCAGCGCGGGCGCTGGTGGGCAAGGCGGTGCCGGTTATGACGCTGCGCGGCACGATCACC
GAAAGCGCGGAGGGCGTGCCCGTCTTCATCACGGTTCACCCTTCCTCCCTTCTGCGCGTTCCGGACGAGATGGACAGGCG
CCGCGCGCGCGAACTCTTTGCCGAGGACATGCGCAAGGTGAAAGCGCTGATGAAGGGGTAA

Upstream 100 bases:

>100_bases
GGCGATTGCGGTGTGGTGGATATTTCGGCCTGAACCGGCATTTCGACAAATCTCGGAACTTTTTCGGCAGGCTGCCGCTT
GAGCCGGCAGTGAGATTGCC

Downstream 100 bases:

>100_bases
TGCGTGTCTACCCTCCCCGCAAGGGGAAGGGTAGGCGCCTCATCTCACCAGTACCGCCCTCAAATCATTCACATTCGTGC
CCGTCGGGCCCGGCGAGAAG

Product: phage SPO1 DNA polymerase-related protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; DNA Polymerase Related Protein; Uracil DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase Bacteriophage-Type; DNA Polymerase; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein Bacteriophage-Type; DNA-Directed DNA Polymerase Protein; DNA Polymerase-Related Protein; Uracil-DNA Glycosylase Family 4 Protein; Bacteriophage-Related DNA Polymerase; DNA Glycosylase; Phage SpO1 DNA Polymerase-Related Protein; Uracil DNA Glycosylase Protein; Bacteriophage-Type DNA Polymerase; Uracil DNA Glycosylase; Phage DNA Polymerase-Related Protein; Uracil DNA Glycosylase Superfamily; Uracil-DNA Glycosylase Phage-Related Protein; Phage Spo1 DNA Polymerase-Related Protein; Phage Shock Protein E; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage DNA Polymerase; Phage SPO1 DNA Polymerase; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase-Like Protein; Transcriptional Regulator Fis Family; Uracil-DNA Glycosylase-Related Protein; N-Terminus Of Phage SPO1 DNA Polymerase; Helicase/Glycosylase; Fis Family Transcriptional Regulator; DNA Polymerase-Like Protein

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MDFPESKHVKLKTLDAVREDAQDCTRCDLYKNATQTVFGEGGNQARVVFVGEQPGDKEDVEGRPFVGPAGRMFDAILEEV
GIDRKKTYVTNAVKHFKFELRGKRRIHSKPNAGEIRACRWWLDQELTLIQPDVAVALGATAARALVGKAVPVMTLRGTIT
ESAEGVPVFITVHPSSLLRVPDEMDRRRARELFAEDMRKVKALMKG

Sequences:

>Translated_206_residues
MDFPESKHVKLKTLDAVREDAQDCTRCDLYKNATQTVFGEGGNQARVVFVGEQPGDKEDVEGRPFVGPAGRMFDAILEEV
GIDRKKTYVTNAVKHFKFELRGKRRIHSKPNAGEIRACRWWLDQELTLIQPDVAVALGATAARALVGKAVPVMTLRGTIT
ESAEGVPVFITVHPSSLLRVPDEMDRRRARELFAEDMRKVKALMKG
>Mature_206_residues
MDFPESKHVKLKTLDAVREDAQDCTRCDLYKNATQTVFGEGGNQARVVFVGEQPGDKEDVEGRPFVGPAGRMFDAILEEV
GIDRKKTYVTNAVKHFKFELRGKRRIHSKPNAGEIRACRWWLDQELTLIQPDVAVALGATAARALVGKAVPVMTLRGTIT
ESAEGVPVFITVHPSSLLRVPDEMDRRRARELFAEDMRKVKALMKG

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 23005; Mature: 23005

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFPESKHVKLKTLDAVREDAQDCTRCDLYKNATQTVFGEGGNQARVVFVGEQPGDKEDV
CCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCEEEEEEEECCCCCCCCC
EGRPFVGPAGRMFDAILEEVGIDRKKTYVTNAVKHFKFELRGKRRIHSKPNAGEIRACRW
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHEEE
WLDQELTLIQPDVAVALGATAARALVGKAVPVMTLRGTITESAEGVPVFITVHPSSLLRV
CCCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEECCHHHHCC
PDEMDRRRARELFAEDMRKVKALMKG
CHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDFPESKHVKLKTLDAVREDAQDCTRCDLYKNATQTVFGEGGNQARVVFVGEQPGDKEDV
CCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCEEEEEEEECCCCCCCCC
EGRPFVGPAGRMFDAILEEVGIDRKKTYVTNAVKHFKFELRGKRRIHSKPNAGEIRACRW
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHEEE
WLDQELTLIQPDVAVALGATAARALVGKAVPVMTLRGTITESAEGVPVFITVHPSSLLRV
CCCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEECCHHHHCC
PDEMDRRRARELFAEDMRKVKALMKG
CHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA