| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110635110
Identifier: 110635110
GI number: 110635110
Start: 3024792
End: 3025922
Strand: Reverse
Name: 110635110
Synonym: Meso_2777
Alternate gene names: NA
Gene position: 3025922-3024792 (Counterclockwise)
Preceding gene: 110635111
Following gene: 110635109
Centisome position: 68.58
GC content: 60.39
Gene sequence:
>1131_bases ATGAAAATCCTGCTCTACACACATTCGCTTATCTCCGACTGGAACCACGGCAACGCCCATTTCCTGCGCGGGGTGATGCG CGAGCTCGCAGCGCAAGGACACACGGTGCTCGCCTTGGAGCCGGAAGACGGCTGGAGCAGGACCAATCTTCTTCGCGATC AGGGGGAAGCCGCGCTTGCACGGTTCCAAAGCGATTTCCCGGAACTGGTTTCGCTCGCTTACGGCCACGGCTTCGATCAT GAGGAAATGCTACACGATGCCGATGTGGTGATCGTGCACGAATGGACTGAACCAGCTCTCGTCGCACAGATCGGGCGCGC GCGGGCAAGGGGCGGCACGTTCACGCTCATCTTCCACGATACCCACCACCGCGCCGTTTCCGCCGAGCCGCAGATCGCGG AGCTTCAGCTCAGGGATTATGACCTTGTGCTTGCCTTCGGCGAGACGCTGCGAGAGCGCTATCTGAAAGCCGGCTGGGGA CAAAATGTCGTCACCTGGCATGAGGCGGCCGATACGCGCCTCTTCCGACCGATCGCTGGTGAGGAAAAAAATGGCGATCT GATCTGGATCGGCAATTGGGGAGATGACGAGCGCACCGCCGAAATCAGTGAGTTCCTGATCAAGCCGGCATCAAGGCTCG GCCTGAAGGGCAGGGTTCATGGCGTACGCTATCCGCCCGAGGCGCTTGGCGCGCTGGCGGAAACGGGCCTTTCCTTTGCC AGATGGATCGCCAATCACGATGTTCCGGTGGCGTTTGCAAGGCATCGTGTCACCGTTCACATTCCGCGCAGGCCTTATGT CCACGCGCTACCGGGGATCCCGACTATTCGCGTGTTCGAGGCGCTGGCCTGCGGCATTCCTTTGATTTCAGCACCGTGGA ACGACGCCGAAGGCCTCTTCCGGCCAGGTACAGACTTCCTCTTCGCGAATGACGGGGAGGAAATGGCGGCCGAGCTTCGC CGTGTCCTTTCGGACCCGGAGCTTGCCGCCAGCCTTTCGGCGGCCGGGCTTGAGACCATCCGCAAGAAGCATAGCTGCGC GCATCGTGTGAATGAGCTTTTCGATGCGCTCATGCATCAAGGCACATTGAGGGTTCGAAAGCAGTTGGCACGGATGGAGG CCGCAGAATAA
Upstream 100 bases:
>100_bases CCAGGGCGCTGGCACGCTCGCGCCGTTTCACGCCGGATATCCAGGCTGGCCGCATGGCAGAGCTCTATCGAGAACTCGTC GACCGACCCATGGCCGCGTG
Downstream 100 bases:
>100_bases TGAAGATTGCATTTTACGGATCGAGCCTCGTTTCGTCTTACTGGAACGGCGCGGCCACCTATTATCGCGGCCTAATCCGC CATCTTGCCCAGCTCGGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MKILLYTHSLISDWNHGNAHFLRGVMRELAAQGHTVLALEPEDGWSRTNLLRDQGEAALARFQSDFPELVSLAYGHGFDH EEMLHDADVVIVHEWTEPALVAQIGRARARGGTFTLIFHDTHHRAVSAEPQIAELQLRDYDLVLAFGETLRERYLKAGWG QNVVTWHEAADTRLFRPIAGEEKNGDLIWIGNWGDDERTAEISEFLIKPASRLGLKGRVHGVRYPPEALGALAETGLSFA RWIANHDVPVAFARHRVTVHIPRRPYVHALPGIPTIRVFEALACGIPLISAPWNDAEGLFRPGTDFLFANDGEEMAAELR RVLSDPELAASLSAAGLETIRKKHSCAHRVNELFDALMHQGTLRVRKQLARMEAAE
Sequences:
>Translated_376_residues MKILLYTHSLISDWNHGNAHFLRGVMRELAAQGHTVLALEPEDGWSRTNLLRDQGEAALARFQSDFPELVSLAYGHGFDH EEMLHDADVVIVHEWTEPALVAQIGRARARGGTFTLIFHDTHHRAVSAEPQIAELQLRDYDLVLAFGETLRERYLKAGWG QNVVTWHEAADTRLFRPIAGEEKNGDLIWIGNWGDDERTAEISEFLIKPASRLGLKGRVHGVRYPPEALGALAETGLSFA RWIANHDVPVAFARHRVTVHIPRRPYVHALPGIPTIRVFEALACGIPLISAPWNDAEGLFRPGTDFLFANDGEEMAAELR RVLSDPELAASLSAAGLETIRKKHSCAHRVNELFDALMHQGTLRVRKQLARMEAAE >Mature_376_residues MKILLYTHSLISDWNHGNAHFLRGVMRELAAQGHTVLALEPEDGWSRTNLLRDQGEAALARFQSDFPELVSLAYGHGFDH EEMLHDADVVIVHEWTEPALVAQIGRARARGGTFTLIFHDTHHRAVSAEPQIAELQLRDYDLVLAFGETLRERYLKAGWG QNVVTWHEAADTRLFRPIAGEEKNGDLIWIGNWGDDERTAEISEFLIKPASRLGLKGRVHGVRYPPEALGALAETGLSFA RWIANHDVPVAFARHRVTVHIPRRPYVHALPGIPTIRVFEALACGIPLISAPWNDAEGLFRPGTDFLFANDGEEMAAELR RVLSDPELAASLSAAGLETIRKKHSCAHRVNELFDALMHQGTLRVRKQLARMEAAE
Specific function: Unknown
COG id: COG4641
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42054; Mature: 42054
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILLYTHSLISDWNHGNAHFLRGVMRELAAQGHTVLALEPEDGWSRTNLLRDQGEAALA CEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCHHHHH RFQSDFPELVSLAYGHGFDHEEMLHDADVVIVHEWTEPALVAQIGRARARGGTFTLIFHD HHHCCHHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEC THHRAVSAEPQIAELQLRDYDLVLAFGETLRERYLKAGWGQNVVTWHEAADTRLFRPIAG CCCCCCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHCCCCCCCEEEHHHCCCCEECCCCC EEKNGDLIWIGNWGDDERTAEISEFLIKPASRLGLKGRVHGVRYPPEALGALAETGLSFA CCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH RWIANHDVPVAFARHRVTVHIPRRPYVHALPGIPTIRVFEALACGIPLISAPWNDAEGLF HHHHCCCCCEEEECCEEEEEECCCCCEEECCCCCHHHHHHHHHHCCCEEECCCCCCCCCC RPGTDFLFANDGEEMAAELRRVLSDPELAASLSAAGLETIRKKHSCAHRVNELFDALMHQ CCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GTLRVRKQLARMEAAE CHHHHHHHHHHHHCCC >Mature Secondary Structure MKILLYTHSLISDWNHGNAHFLRGVMRELAAQGHTVLALEPEDGWSRTNLLRDQGEAALA CEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCHHHHH RFQSDFPELVSLAYGHGFDHEEMLHDADVVIVHEWTEPALVAQIGRARARGGTFTLIFHD HHHCCHHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEC THHRAVSAEPQIAELQLRDYDLVLAFGETLRERYLKAGWGQNVVTWHEAADTRLFRPIAG CCCCCCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHCCCCCCCEEEHHHCCCCEECCCCC EEKNGDLIWIGNWGDDERTAEISEFLIKPASRLGLKGRVHGVRYPPEALGALAETGLSFA CCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH RWIANHDVPVAFARHRVTVHIPRRPYVHALPGIPTIRVFEALACGIPLISAPWNDAEGLF HHHHCCCCCEEEECCEEEEEECCCCCEEECCCCCHHHHHHHHHHCCCEEECCCCCCCCCC RPGTDFLFANDGEEMAAELRRVLSDPELAASLSAAGLETIRKKHSCAHRVNELFDALMHQ CCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GTLRVRKQLARMEAAE CHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA