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The map label for this gene is yrbH [C]

Identifier: 110635071

GI number: 110635071

Start: 2977346

End: 2978341

Strand: Reverse

Name: yrbH [C]

Synonym: Meso_2737

Alternate gene names: 110635071

Gene position: 2978341-2977346 (Counterclockwise)

Preceding gene: 110635073

Following gene: 110635068

Centisome position: 67.5

GC content: 63.76

Gene sequence:

>996_bases
ATGCTGAGCAGACAGATCAAAAGGTTCGATGCTGCGAGCGCCATTGCATCGGCAGCGCGCACGCTGAGCACGGAACAGGC
GGCACTGGCTGCTCTTGCCGAAGCGCTCGACAATGGCTTGTCGGAATCCTTCGCCGAGGCGGTCGAGATGATCGCGCGCA
TTTCCGGACGGGTCATCGTAACGGGTGTGGGCAAGAGCGGGCATATCGGGACGAAGATTGCCGCCACTCTGGCATCCACC
GGCACGCCCGCCTTTTTTGTGCATCCGGTCGAGGCCAATCACGGCGATCTCGGCATGATTGCCCCTGATGATGCGATCAT
AGCGCTATCCTGGTCCGGGGAGAGCGCGGAGTTGAAGGGCATCGTCGCCTATGCGCGCCGGTTCTCCATCCCGCTCATCG
CGATGACATCCGGTAGCCGCTCCGCGCTAGCGCGGGAGTCGAGCGTAGTGCTCTGCCTTCCCAAAGTGCAGGAGGCCTGC
CCGCACGGGCTGGCGCCTACCTCCTCCACGCTCGTGCAACTTGCCGCCGGCGATGCGCTGGCGATCGCGCTTCTGGAGGC
GCGGGGATTCACGCCAGACCACTTCCGCACCTTCCACCCCGGAGGGCAACTCGGCGCGAAATTAACGCGTATCGGCGACA
TTATGCATACGGGCGAGCGCATGCCGCTTGTCTCCTCCGGCACCGGGATGCGCGAGGCGATCCTCGAGATCTCGCGCAAG
GGTTTCGGCTGCGTGGGCATCACTAACGGCGAGGGAGCGCTGATCGGTATCGTCACGGACGGCGACCTGCGCCGCCACAT
GGACAGCGATTTGCTGGCCATGAGCGTGGACGAGGTGATGACGCACGCGCCAAAAACCATAAAGCCCGACACGCTGGCCG
CGGCAGCGCTGCAAATGATCAATTCTTCCGCGATCACCACCTTGATGGTGGTCGAGAATGGCAGGCCGGTCGGCATCGTC
CACCTGCACGATTTGCTGCGGATCGGGGCGGCCTGA

Upstream 100 bases:

>100_bases
AAAAGCTTGCGGTTAACACTTTGTTGAAGACTGCTCCGGCCATCATCTCTCGCGTAAAGAGCGTTGGACATGGGCGCTTG
AAAGAGGTAAGCGGCACTCC

Downstream 100 bases:

>100_bases
CAGGGCCGGCTATTCCTTTTCCACGTGTAAATCGCCGCCTCTCGCCGAGACGACGCGAACACGGGTGCCAGCCGGCAGGT
CGGGCCCGGTCACGCGCCAC

Product: KpsF/GutQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MLSRQIKRFDAASAIASAARTLSTEQAALAALAEALDNGLSESFAEAVEMIARISGRVIVTGVGKSGHIGTKIAATLAST
GTPAFFVHPVEANHGDLGMIAPDDAIIALSWSGESAELKGIVAYARRFSIPLIAMTSGSRSALARESSVVLCLPKVQEAC
PHGLAPTSSTLVQLAAGDALAIALLEARGFTPDHFRTFHPGGQLGAKLTRIGDIMHTGERMPLVSSGTGMREAILEISRK
GFGCVGITNGEGALIGIVTDGDLRRHMDSDLLAMSVDEVMTHAPKTIKPDTLAAAALQMINSSAITTLMVVENGRPVGIV
HLHDLLRIGAA

Sequences:

>Translated_331_residues
MLSRQIKRFDAASAIASAARTLSTEQAALAALAEALDNGLSESFAEAVEMIARISGRVIVTGVGKSGHIGTKIAATLAST
GTPAFFVHPVEANHGDLGMIAPDDAIIALSWSGESAELKGIVAYARRFSIPLIAMTSGSRSALARESSVVLCLPKVQEAC
PHGLAPTSSTLVQLAAGDALAIALLEARGFTPDHFRTFHPGGQLGAKLTRIGDIMHTGERMPLVSSGTGMREAILEISRK
GFGCVGITNGEGALIGIVTDGDLRRHMDSDLLAMSVDEVMTHAPKTIKPDTLAAAALQMINSSAITTLMVVENGRPVGIV
HLHDLLRIGAA
>Mature_331_residues
MLSRQIKRFDAASAIASAARTLSTEQAALAALAEALDNGLSESFAEAVEMIARISGRVIVTGVGKSGHIGTKIAATLAST
GTPAFFVHPVEANHGDLGMIAPDDAIIALSWSGESAELKGIVAYARRFSIPLIAMTSGSRSALARESSVVLCLPKVQEAC
PHGLAPTSSTLVQLAAGDALAIALLEARGFTPDHFRTFHPGGQLGAKLTRIGDIMHTGERMPLVSSGTGMREAILEISRK
GFGCVGITNGEGALIGIVTDGDLRRHMDSDLLAMSVDEVMTHAPKTIKPDTLAAAALQMINSSAITTLMVVENGRPVGIV
HLHDLLRIGAA

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=324, Percent_Identity=46.9135802469136, Blast_Score=283, Evalue=8e-78,
Organism=Escherichia coli, GI87082151, Length=309, Percent_Identity=42.7184466019417, Blast_Score=219, Evalue=1e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 34385; Mature: 34385

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRQIKRFDAASAIASAARTLSTEQAALAALAEALDNGLSESFAEAVEMIARISGRVIV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEE
TGVGKSGHIGTKIAATLASTGTPAFFVHPVEANHGDLGMIAPDDAIIALSWSGESAELKG
EECCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCEEEECCCCEEEEEEECCCCCHHHH
IVAYARRFSIPLIAMTSGSRSALARESSVVLCLPKVQEACPHGLAPTSSTLVQLAAGDAL
HHHHHHHCCCCEEEEECCCHHHHHCCCCEEEEECCHHHHCCCCCCCCHHHHEEEECCCEE
AIALLEARGFTPDHFRTFHPGGQLGAKLTRIGDIMHTGERMPLVSSGTGMREAILEISRK
EEEEEHHCCCCCHHCEEECCCHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHCC
GFGCVGITNGEGALIGIVTDGDLRRHMDSDLLAMSVDEVMTHAPKTIKPDTLAAAALQMI
CCEEEEEECCCCEEEEEEECCHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
NSSAITTLMVVENGRPVGIVHLHDLLRIGAA
CCCCEEEEEEEECCCCEEEEEHHHHHHHCCC
>Mature Secondary Structure
MLSRQIKRFDAASAIASAARTLSTEQAALAALAEALDNGLSESFAEAVEMIARISGRVIV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEE
TGVGKSGHIGTKIAATLASTGTPAFFVHPVEANHGDLGMIAPDDAIIALSWSGESAELKG
EECCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCEEEECCCCEEEEEEECCCCCHHHH
IVAYARRFSIPLIAMTSGSRSALARESSVVLCLPKVQEACPHGLAPTSSTLVQLAAGDAL
HHHHHHHCCCCEEEEECCCHHHHHCCCCEEEEECCHHHHCCCCCCCCHHHHEEEECCCEE
AIALLEARGFTPDHFRTFHPGGQLGAKLTRIGDIMHTGERMPLVSSGTGMREAILEISRK
EEEEEHHCCCCCHHCEEECCCHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHCC
GFGCVGITNGEGALIGIVTDGDLRRHMDSDLLAMSVDEVMTHAPKTIKPDTLAAAALQMI
CCEEEEEECCCCEEEEEEECCHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
NSSAITTLMVVENGRPVGIVHLHDLLRIGAA
CCCCEEEEEEEECCCCEEEEEHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]