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The map label for this gene is yxeQ [H]

Identifier: 110634991

GI number: 110634991

Start: 2875556

End: 2877070

Strand: Reverse

Name: yxeQ [H]

Synonym: Meso_2657

Alternate gene names: 110634991

Gene position: 2877070-2875556 (Counterclockwise)

Preceding gene: 110634992

Following gene: 110634990

Centisome position: 65.2

GC content: 62.71

Gene sequence:

>1515_bases
ATGGTAACGCACAATCTCGCACCGATAAGCCAGAGCGATCCCTCCGCGGGCAATGCGGCCAATTGGTCGCCTGGCGAGGC
GGAACGGCGGATAGCCGTTCATTTCCATCAGACCCGCTACGAGGATATTCCGCCAGCGACGCTGGATTTTACGAAATGCC
TCATGCTCGATACGATCGGCGCGGCAATCGCTGGCTTCCAGGCCGAGGGGGCGACCGCCGTCGCCGATCTGGTCACCTCC
TGGGGCGGCACGCCGCAGGCGCGCATCATCGGACGCGGCGACATGGTCCCGGCTCATCAGGCGGCAATGGCGAATGCCAC
CATGGCTCGCGCTCTCGAAATCGACGATGTGCACGAGCAGGGAATGCTTCATCCGACCGCGTCCATCGTCCCCTTGGCAC
TTGCGGTCTCCGAAGCGGCCGGCGGCATTACCGGCCGGCAATTCGCTGAGGCGGTGGTGCTCGGCATCGATCTGGCGATC
CGCATCGGCACCGCTCCCCGCGCGGAAGTGGCTGGCGGGCGCACGCAACCAAGGACCCAATCCCACACCTATCATATCGG
CATGCTGGCTGGTGCCATGGTCGCCGGAAAGATAATGGACCTGCCTTCGGGGGGACTTCAGAACGCGATGGGGATCGCCT
ACAGCCAATGTGCCGGAAATCTGCAAGCGGTCGCTGAGGGAGCCCTGACGGTCCGCGTTCAGCAAGGGCTTTCGGCCTCC
GCCGCCATCGTCTCTGCGGAATTGGCCCGGCTCGGCGTGACTGGCGCCATGCAGTCGCTGACCGGTGTTTCGGGTTACTA
TAATGCCCTTCACGGCGGCCGTTGCGACCGCGCAGTCCTAATCGGGGACCTCGGCCGACGCTATGCGAACGAGGAAGTCA
GCATAAAACCCTACCCATGCTGCAAACACATCCACACGGCCGCGGCCGCTGCCGAAAACCTCGTGCGAGAGCAGGGGATC
CGGGCCGATGATATCGAACGTGTCGTCATCCACGTCAAAAACCAGGAATATTATGACTTGGTCTGCCGCCCGGAGGGGCG
CGAAGAACGCCGCGCATCGATGTTCGGCGAGCGCGGCATGGTGCATGCTCAGATGAGCCTTCCTTTTGTCGTTGCGGTTG
CGCTTTGCGATGGCAAAGTCAGCCTCGACCGGTTCGAGGCGGCCGGGCGGACCAGCGACGATGTGCTGTCGATGATGGGG
CGGATCGAAACGGTCATGGATGGCGGGCCTGACGACAACGTGCTTCCCACTCCGGGTATTGTCGACGTCTATCTTGCCGG
CGCGTCCACTCCGCTGACTTCCGAGGTCCGTTACGTCAAGGGGCATCCGATGAACCGCATGAGCTTTGACGACGTCGCCG
GCAAGTTCATGGATATGACGGACTTTTCCGGCGCATGGTTCTCGCGCGACCGCCGCCGGCGGATCATCGAAATGATCCAT
GCGATCGAAACGCTGCCTGACATGAGCGACCTTGCCGCCTTGCTGGTTGCCGATACCTCCCCCGCCAATTCTTGA

Upstream 100 bases:

>100_bases
GCGCGAGATCACGATCAAATACTGGCCCTGATCCTGCATCCATCGCGGCGACAACAAGAACGCCGGGTTGGCCGGCGTTC
TTTTGAGCACGAGCGCATTC

Downstream 100 bases:

>100_bases
GCAATGGGCCGTGCCGCCCAAAAAAATGGAAATACAAGATGATCTACGATGCTGAATCGAGAAATATGACGTTCTCGCTT
GCGGGCGATGTAATCCTCAA

Product: MmgE/PrpD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 504

Protein sequence:

>504_residues
MVTHNLAPISQSDPSAGNAANWSPGEAERRIAVHFHQTRYEDIPPATLDFTKCLMLDTIGAAIAGFQAEGATAVADLVTS
WGGTPQARIIGRGDMVPAHQAAMANATMARALEIDDVHEQGMLHPTASIVPLALAVSEAAGGITGRQFAEAVVLGIDLAI
RIGTAPRAEVAGGRTQPRTQSHTYHIGMLAGAMVAGKIMDLPSGGLQNAMGIAYSQCAGNLQAVAEGALTVRVQQGLSAS
AAIVSAELARLGVTGAMQSLTGVSGYYNALHGGRCDRAVLIGDLGRRYANEEVSIKPYPCCKHIHTAAAAAENLVREQGI
RADDIERVVIHVKNQEYYDLVCRPEGREERRASMFGERGMVHAQMSLPFVVAVALCDGKVSLDRFEAAGRTSDDVLSMMG
RIETVMDGGPDDNVLPTPGIVDVYLAGASTPLTSEVRYVKGHPMNRMSFDDVAGKFMDMTDFSGAWFSRDRRRRIIEMIH
AIETLPDMSDLAALLVADTSPANS

Sequences:

>Translated_504_residues
MVTHNLAPISQSDPSAGNAANWSPGEAERRIAVHFHQTRYEDIPPATLDFTKCLMLDTIGAAIAGFQAEGATAVADLVTS
WGGTPQARIIGRGDMVPAHQAAMANATMARALEIDDVHEQGMLHPTASIVPLALAVSEAAGGITGRQFAEAVVLGIDLAI
RIGTAPRAEVAGGRTQPRTQSHTYHIGMLAGAMVAGKIMDLPSGGLQNAMGIAYSQCAGNLQAVAEGALTVRVQQGLSAS
AAIVSAELARLGVTGAMQSLTGVSGYYNALHGGRCDRAVLIGDLGRRYANEEVSIKPYPCCKHIHTAAAAAENLVREQGI
RADDIERVVIHVKNQEYYDLVCRPEGREERRASMFGERGMVHAQMSLPFVVAVALCDGKVSLDRFEAAGRTSDDVLSMMG
RIETVMDGGPDDNVLPTPGIVDVYLAGASTPLTSEVRYVKGHPMNRMSFDDVAGKFMDMTDFSGAWFSRDRRRRIIEMIH
AIETLPDMSDLAALLVADTSPANS
>Mature_504_residues
MVTHNLAPISQSDPSAGNAANWSPGEAERRIAVHFHQTRYEDIPPATLDFTKCLMLDTIGAAIAGFQAEGATAVADLVTS
WGGTPQARIIGRGDMVPAHQAAMANATMARALEIDDVHEQGMLHPTASIVPLALAVSEAAGGITGRQFAEAVVLGIDLAI
RIGTAPRAEVAGGRTQPRTQSHTYHIGMLAGAMVAGKIMDLPSGGLQNAMGIAYSQCAGNLQAVAEGALTVRVQQGLSAS
AAIVSAELARLGVTGAMQSLTGVSGYYNALHGGRCDRAVLIGDLGRRYANEEVSIKPYPCCKHIHTAAAAAENLVREQGI
RADDIERVVIHVKNQEYYDLVCRPEGREERRASMFGERGMVHAQMSLPFVVAVALCDGKVSLDRFEAAGRTSDDVLSMMG
RIETVMDGGPDDNVLPTPGIVDVYLAGASTPLTSEVRYVKGHPMNRMSFDDVAGKFMDMTDFSGAWFSRDRRRRIIEMIH
AIETLPDMSDLAALLVADTSPANS

Specific function: Unknown

COG id: COG2079

COG function: function code R; Uncharacterized protein involved in propionate catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prpD family [H]

Homologues:

Organism=Homo sapiens, GI310129732, Length=474, Percent_Identity=24.4725738396624, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI310110533, Length=474, Percent_Identity=24.4725738396624, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI310123058, Length=466, Percent_Identity=24.0343347639485, Blast_Score=91, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005656 [H]

Pfam domain/function: PF03972 MmgE_PrpD [H]

EC number: NA

Molecular weight: Translated: 53561; Mature: 53561

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTHNLAPISQSDPSAGNAANWSPGEAERRIAVHFHQTRYEDIPPATLDFTKCLMLDTIG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCCCCHHHHHHHHHHHHHH
AAIAGFQAEGATAVADLVTSWGGTPQARIIGRGDMVPAHQAAMANATMARALEIDDVHEQ
HHHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHC
GMLHPTASIVPLALAVSEAAGGITGRQFAEAVVLGIDLAIRIGTAPRAEVAGGRTQPRTQ
CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEEEEECCCCCHHHCCCCCCCCCC
SHTYHIGMLAGAMVAGKIMDLPSGGLQNAMGIAYSQCAGNLQAVAEGALTVRVQQGLSAS
CCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCHH
AAIVSAELARLGVTGAMQSLTGVSGYYNALHGGRCDRAVLIGDLGRRYANEEVSIKPYPC
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEHHHHHHHCCCCCCCCCCHH
CKHIHTAAAAAENLVREQGIRADDIERVVIHVKNQEYYDLVCRPEGREERRASMFGERGM
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCC
VHAQMSLPFVVAVALCDGKVSLDRFEAAGRTSDDVLSMMGRIETVMDGGPDDNVLPTPGI
EEEECCCCEEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
VDVYLAGASTPLTSEVRYVKGHPMNRMSFDDVAGKFMDMTDFSGAWFSRDRRRRIIEMIH
EEEEEECCCCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AIETLPDMSDLAALLVADTSPANS
HHHHCCCHHHHHEEEEECCCCCCC
>Mature Secondary Structure
MVTHNLAPISQSDPSAGNAANWSPGEAERRIAVHFHQTRYEDIPPATLDFTKCLMLDTIG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCCCCHHHHHHHHHHHHHH
AAIAGFQAEGATAVADLVTSWGGTPQARIIGRGDMVPAHQAAMANATMARALEIDDVHEQ
HHHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHC
GMLHPTASIVPLALAVSEAAGGITGRQFAEAVVLGIDLAIRIGTAPRAEVAGGRTQPRTQ
CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEEEEECCCCCHHHCCCCCCCCCC
SHTYHIGMLAGAMVAGKIMDLPSGGLQNAMGIAYSQCAGNLQAVAEGALTVRVQQGLSAS
CCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCHH
AAIVSAELARLGVTGAMQSLTGVSGYYNALHGGRCDRAVLIGDLGRRYANEEVSIKPYPC
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEHHHHHHHCCCCCCCCCCHH
CKHIHTAAAAAENLVREQGIRADDIERVVIHVKNQEYYDLVCRPEGREERRASMFGERGM
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCC
VHAQMSLPFVVAVALCDGKVSLDRFEAAGRTSDDVLSMMGRIETVMDGGPDDNVLPTPGI
EEEECCCCEEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
VDVYLAGASTPLTSEVRYVKGHPMNRMSFDDVAGKFMDMTDFSGAWFSRDRRRRIIEMIH
EEEEEECCCCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AIETLPDMSDLAALLVADTSPANS
HHHHCCCHHHHHEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377 [H]