| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634981
Identifier: 110634981
GI number: 110634981
Start: 2861875
End: 2863911
Strand: Reverse
Name: 110634981
Synonym: Meso_2647
Alternate gene names: NA
Gene position: 2863911-2861875 (Counterclockwise)
Preceding gene: 110634990
Following gene: 110634980
Centisome position: 64.91
GC content: 61.95
Gene sequence:
>2037_bases ATGCTCAGAATTGGAATTGATATTGGTGGAACGTTCACGGACTTTGCAATTTGGGACGGCCATGCTTCCGGTTATACCGG CGTCGAAATATTCAAAGTCCCTTCCACGCCGGGCAACTTCCACCTCGGTGTCATCGAAGGGCTGAAGCTGCTGCTCGAAC GCGGCCGCATCACGGCCGACCAATCCATCATGATCGTTCACGGCACGACGGTCAGCACCAATGCCGTCATCGAACGGAGC AGCCCGCCCGTTGCGCTGCTCGTCACCAGCGGGTTCCGGGATATTCTCGGCATGGGCCGCCTGAGGATGAACGATCCGAT CAACCTGTTCGACCGGCGCGCAGAACCGCTCATCCCGCGCAACATGGTCTTCGAGATCGAAGAACGCATGCTGCAGACCG GCGAGGTGGATATCGAGCTCAATCCCGTACAGCTGATCCGCTCAGCGCGGGCCGCACTGGAGGCCGGAGCGCGGGCGCTG GCCGTCTGCTTCCTGCACTCCTACCGCAACCCGGCGCACGAGCTGGCCGCCCGCGATATTCTCGTGAAGAAATTCGAAGA CGTCGAGGTAACCCTCTCGCACGAAATATGGTCCCAGCCTTCTGAATACGAACGGGCCAGCGCCGCGGTTCTGAATGCCT ATGCCAGTCTTTCGATGAAAGGTTATCTGGCCGAACTGGAAGGCTTTCTTCGGCAAAATCTGAAGAATGCGCGTCTGTTC ATTTCCAAATCGAACGGCGGCGTGATGGCCTCCAACGAAGCGGGGAGGATGCCGATCCACACGCTGCTGTCCGGACCGGC GGCCGGCGTCACCGCAGCATGCGCCCTCGGCAACCTGATCGAGGAACCGCAGCTGCTGACCATGGACATGGGCGGTACGA GCACGGACATCTCCGTCGTCAACAAGGGACAGGCCGTCACGTCCCTTCAGGGCAAGGTGGGCGATTTCCCGCTGATGATG CCGGTGACCGCGGTCGAAGCCATCGGCGCCGGTGGCGGATCTATCGCCTGGGTCGACGGGAAGGTACTGCATGTCGGTCC CCGTTCAGCCGGTGCATTTCCCGGGCCAGCCTGTTACGGGCTCGGCGGCACCCAGCCGACGATTTCCGACGCCTACCTGC TCTGCGGCTATCTTTCGCCCGAACGCCCGCTCGCAGGCCGCCTCAGCTTGAGCGTCGATCTTGCCGCCAAGGCCATGCAA CCGATCGCGGATGCGCTCGGCATGGATGTGGTCGCTGCCGCCGAAGCCTGCATCACGGTTGCGACCGCCAATATGCTCGC CAGCGCCTTGCCCTTCATTTCACGTCTCGGGGTTCCCCCGTCCGAACTTACACTGATGTCGTTCGGGGGCGCCGGTGCCA TCCATGGCGCGCTGCTCGCAGATGAGATCGACATCGGCCGGGTGGTCCTGCCGCGCATGTCGTCGGTCTTCTGCGCCTAT GGATGCCTCGTCTCCGATCTTCTCTTCGACGTCGTGGAAAGCGTGCAGGGACGTGCGCTCGACAATGAAGTGGTCTTCCA GGTCTACAAAGGGTTGGAAAAGGACGCCCGGGCCTGGCTCGACGAGCAGGTCGGCGGAAACTTCCTTCCGACCGTCACCC TCACTTACATAGCCGATGTCCGCTACAAGGGGCAGGCTTTCGACGTGGCGACGGAATTCAGCCTTGAAGGCGATCCGCTT GCTGCGATCAATGCGGCTTTCCATGTCGAGCACGAGCGGCTCTACGGCCACTCCAGTCCGCAGCTTCCGATCGAGATCCT GACGCTGCGTCTGCAGATCCGCGGCGCGCTGGAACGCCCGCGCGGCGCGCCTCTGCCGCTTTCGCCTGCGAAGATCGAGC CGAAGACCCGACGGAAGATCCGGTATGGCGGAAAGAGCTACGACGCGGCCATTTTCGACAAGGCGGCGATGCCGATCGGT TTCCGCACCTCCGGCCCGGCCATCATCGAGCAGGAAACCATCACCGTTCTCGTTCCTCCCGCGTTCGACGTGACGATCGG TCGATACGACGACGTCATTCTTGAAAGAAGGGCATAA
Upstream 100 bases:
>100_bases TGATCCCTGAAAAAAGGTTGGCTAACGTAAGGCCTGCTTCTTGAAGGTCTGTCGGATCCCTCCGGCTGTCCGTCCTCTCG AATAGTTCAGGATTCTCCGG
Downstream 100 bases:
>100_bases CAATGGATCCCGTTTTCACCGAAGTGATGAAACACCGTTTTGCAGCGATCGCCGACGAAGCGAGCAATACGGTCTATCGC ACGGCGTTCACGACCTTCGT
Product: hydantoinase/oxoprolinase
Products: ADP; phosphate; N-carbamoylsarcosine
Alternate protein names: NA
Number of amino acids: Translated: 678; Mature: 678
Protein sequence:
>678_residues MLRIGIDIGGTFTDFAIWDGHASGYTGVEIFKVPSTPGNFHLGVIEGLKLLLERGRITADQSIMIVHGTTVSTNAVIERS SPPVALLVTSGFRDILGMGRLRMNDPINLFDRRAEPLIPRNMVFEIEERMLQTGEVDIELNPVQLIRSARAALEAGARAL AVCFLHSYRNPAHELAARDILVKKFEDVEVTLSHEIWSQPSEYERASAAVLNAYASLSMKGYLAELEGFLRQNLKNARLF ISKSNGGVMASNEAGRMPIHTLLSGPAAGVTAACALGNLIEEPQLLTMDMGGTSTDISVVNKGQAVTSLQGKVGDFPLMM PVTAVEAIGAGGGSIAWVDGKVLHVGPRSAGAFPGPACYGLGGTQPTISDAYLLCGYLSPERPLAGRLSLSVDLAAKAMQ PIADALGMDVVAAAEACITVATANMLASALPFISRLGVPPSELTLMSFGGAGAIHGALLADEIDIGRVVLPRMSSVFCAY GCLVSDLLFDVVESVQGRALDNEVVFQVYKGLEKDARAWLDEQVGGNFLPTVTLTYIADVRYKGQAFDVATEFSLEGDPL AAINAAFHVEHERLYGHSSPQLPIEILTLRLQIRGALERPRGAPLPLSPAKIEPKTRRKIRYGGKSYDAAIFDKAAMPIG FRTSGPAIIEQETITVLVPPAFDVTIGRYDDVILERRA
Sequences:
>Translated_678_residues MLRIGIDIGGTFTDFAIWDGHASGYTGVEIFKVPSTPGNFHLGVIEGLKLLLERGRITADQSIMIVHGTTVSTNAVIERS SPPVALLVTSGFRDILGMGRLRMNDPINLFDRRAEPLIPRNMVFEIEERMLQTGEVDIELNPVQLIRSARAALEAGARAL AVCFLHSYRNPAHELAARDILVKKFEDVEVTLSHEIWSQPSEYERASAAVLNAYASLSMKGYLAELEGFLRQNLKNARLF ISKSNGGVMASNEAGRMPIHTLLSGPAAGVTAACALGNLIEEPQLLTMDMGGTSTDISVVNKGQAVTSLQGKVGDFPLMM PVTAVEAIGAGGGSIAWVDGKVLHVGPRSAGAFPGPACYGLGGTQPTISDAYLLCGYLSPERPLAGRLSLSVDLAAKAMQ PIADALGMDVVAAAEACITVATANMLASALPFISRLGVPPSELTLMSFGGAGAIHGALLADEIDIGRVVLPRMSSVFCAY GCLVSDLLFDVVESVQGRALDNEVVFQVYKGLEKDARAWLDEQVGGNFLPTVTLTYIADVRYKGQAFDVATEFSLEGDPL AAINAAFHVEHERLYGHSSPQLPIEILTLRLQIRGALERPRGAPLPLSPAKIEPKTRRKIRYGGKSYDAAIFDKAAMPIG FRTSGPAIIEQETITVLVPPAFDVTIGRYDDVILERRA >Mature_678_residues MLRIGIDIGGTFTDFAIWDGHASGYTGVEIFKVPSTPGNFHLGVIEGLKLLLERGRITADQSIMIVHGTTVSTNAVIERS SPPVALLVTSGFRDILGMGRLRMNDPINLFDRRAEPLIPRNMVFEIEERMLQTGEVDIELNPVQLIRSARAALEAGARAL AVCFLHSYRNPAHELAARDILVKKFEDVEVTLSHEIWSQPSEYERASAAVLNAYASLSMKGYLAELEGFLRQNLKNARLF ISKSNGGVMASNEAGRMPIHTLLSGPAAGVTAACALGNLIEEPQLLTMDMGGTSTDISVVNKGQAVTSLQGKVGDFPLMM PVTAVEAIGAGGGSIAWVDGKVLHVGPRSAGAFPGPACYGLGGTQPTISDAYLLCGYLSPERPLAGRLSLSVDLAAKAMQ PIADALGMDVVAAAEACITVATANMLASALPFISRLGVPPSELTLMSFGGAGAIHGALLADEIDIGRVVLPRMSSVFCAY GCLVSDLLFDVVESVQGRALDNEVVFQVYKGLEKDARAWLDEQVGGNFLPTVTLTYIADVRYKGQAFDVATEFSLEGDPL AAINAAFHVEHERLYGHSSPQLPIEILTLRLQIRGALERPRGAPLPLSPAKIEPKTRRKIRYGGKSYDAAIFDKAAMPIG FRTSGPAIIEQETITVLVPPAFDVTIGRYDDVILERRA
Specific function: Unknown
COG id: COG0145
COG function: function code EQ; N-methylhydantoinase A/acetone carboxylase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=735, Percent_Identity=27.891156462585, Blast_Score=163, Evalue=4e-40, Organism=Caenorhabditis elegans, GI133901900, Length=728, Percent_Identity=25.8241758241758, Blast_Score=155, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6322634, Length=736, Percent_Identity=27.7173913043478, Blast_Score=181, Evalue=5e-46, Organism=Drosophila melanogaster, GI45550492, Length=727, Percent_Identity=26.2723521320495, Blast_Score=181, Evalue=1e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008040 - InterPro: IPR002821 [H]
Pfam domain/function: PF05378 Hydant_A_N; PF01968 Hydantoinase_A [H]
EC number: 3.5.2.14
Molecular weight: Translated: 72576; Mature: 72576
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRIGIDIGGTFTDFAIWDGHASGYTGVEIFKVPSTPGNFHLGVIEGLKLLLERGRITAD CEEEEEECCCCEEEEEEECCCCCCCCCEEEEECCCCCCCEEEHHHHHHHHHHHCCCCCCC QSIMIVHGTTVSTNAVIERSSPPVALLVTSGFRDILGMGRLRMNDPINLFDRRAEPLIPR CEEEEEECCEEECCEEEECCCCCEEEEEECCCHHHHCCCCEECCCCHHHHHCCCCCCCCC NMVFEIEERMLQTGEVDIELNPVQLIRSARAALEAGARALAVCFLHSYRNPAHELAARDI HHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHH LVKKFEDVEVTLSHEIWSQPSEYERASAAVLNAYASLSMKGYLAELEGFLRQNLKNARLF HHHCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE ISKSNGGVMASNEAGRMPIHTLLSGPAAGVTAACALGNLIEEPQLLTMDMGGTSTDISVV EEECCCCEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEE NKGQAVTSLQGKVGDFPLMMPVTAVEAIGAGGGSIAWVDGKVLHVGPRSAGAFPGPACYG ECCCEEEECCCCCCCCCEEHHHHHHHHHCCCCCEEEEECCEEEEECCCCCCCCCCCCEEC LGGTQPTISDAYLLCGYLSPERPLAGRLSLSVDLAAKAMQPIADALGMDVVAAAEACITV CCCCCCCCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ATANMLASALPFISRLGVPPSELTLMSFGGAGAIHGALLADEIDIGRVVLPRMSSVFCAY HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHEECCCCCCCCHHHHHHHHHHHH GCLVSDLLFDVVESVQGRALDNEVVFQVYKGLEKDARAWLDEQVGGNFLPTVTLTYIADV HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEEEC RYKGQAFDVATEFSLEGDPLAAINAAFHVEHERLYGHSSPQLPIEILTLRLQIRGALERP EECCCEEEEEEEECCCCCCCEEEEHEEEEEHHHHCCCCCCCCCCEEEEEEEEEHHHHCCC RGAPLPLSPAKIEPKTRRKIRYGGKSYDAAIFDKAAMPIGFRTSGPAIIEQETITVLVPP CCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECEEEEEECC AFDVTIGRYDDVILERRA CCEEEECCCCCCCEECCC >Mature Secondary Structure MLRIGIDIGGTFTDFAIWDGHASGYTGVEIFKVPSTPGNFHLGVIEGLKLLLERGRITAD CEEEEEECCCCEEEEEEECCCCCCCCCEEEEECCCCCCCEEEHHHHHHHHHHHCCCCCCC QSIMIVHGTTVSTNAVIERSSPPVALLVTSGFRDILGMGRLRMNDPINLFDRRAEPLIPR CEEEEEECCEEECCEEEECCCCCEEEEEECCCHHHHCCCCEECCCCHHHHHCCCCCCCCC NMVFEIEERMLQTGEVDIELNPVQLIRSARAALEAGARALAVCFLHSYRNPAHELAARDI HHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHH LVKKFEDVEVTLSHEIWSQPSEYERASAAVLNAYASLSMKGYLAELEGFLRQNLKNARLF HHHCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE ISKSNGGVMASNEAGRMPIHTLLSGPAAGVTAACALGNLIEEPQLLTMDMGGTSTDISVV EEECCCCEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEE NKGQAVTSLQGKVGDFPLMMPVTAVEAIGAGGGSIAWVDGKVLHVGPRSAGAFPGPACYG ECCCEEEECCCCCCCCCEEHHHHHHHHHCCCCCEEEEECCEEEEECCCCCCCCCCCCEEC LGGTQPTISDAYLLCGYLSPERPLAGRLSLSVDLAAKAMQPIADALGMDVVAAAEACITV CCCCCCCCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ATANMLASALPFISRLGVPPSELTLMSFGGAGAIHGALLADEIDIGRVVLPRMSSVFCAY HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHEECCCCCCCCHHHHHHHHHHHH GCLVSDLLFDVVESVQGRALDNEVVFQVYKGLEKDARAWLDEQVGGNFLPTVTLTYIADV HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEEEC RYKGQAFDVATEFSLEGDPLAAINAAFHVEHERLYGHSSPQLPIEILTLRLQIRGALERP EECCCEEEEEEEECCCCCCCEEEEHEEEEEHHHHCCCCCCCCCCEEEEEEEEEHHHHCCC RGAPLPLSPAKIEPKTRRKIRYGGKSYDAAIFDKAAMPIGFRTSGPAIIEQETITVLVPP CCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECEEEEEECC AFDVTIGRYDDVILERRA CCEEEECCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; N-methylimidazolidine-2,4-dione; H2O
Specific reaction: ATP + N-methylimidazolidine-2,4-dione + 2 H2O = ADP + phosphate + N-carbamoylsarcosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]