| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is torZ [C]
Identifier: 110634979
GI number: 110634979
Start: 2857555
End: 2859870
Strand: Reverse
Name: torZ [C]
Synonym: Meso_2645
Alternate gene names: 110634979
Gene position: 2859870-2857555 (Counterclockwise)
Preceding gene: 110634980
Following gene: 110634978
Centisome position: 64.81
GC content: 62.35
Gene sequence:
>2316_bases ATGGGTCAGGCGCAGAAGATTCTGCACAGCAGTCACTGGGGGATATTCTTCGCGGTCGTCGAGAACGGCCGGATCGTGGA TATCGAACCCTTCAAAGGCGATCCTGCGCCGTCTCCATTGCTGGCTTCGATCCCGGAGTGGACGAATGCCGAAACCCGGG TTCTCCGGCCCATGGTTCGCGAGGGCTGGCTGCGCGCCCACGACGCCGGGCGGCCGCAGGACAACCGCGACCGGCGCGGC AAGGACGAATTCATCGAGGTGTCATGGCCCCAAGCCATTGAATTGATCGCATCCGAGATCAACCGTGTGAGGACGGAACT CGGAAATTCCTCGATTTTTGCCGGCTCTTACGGTTGGACGAGTGCCGGGCGGTTCCACCACGCGGCCTCCCAGATCAAGC GGCTGCTGAATCTCGTCGGCGGTTATACCGGCCACGTGGACACCTACAGCATTGCTGCAGGGCCCGTCCTGCTGCGCTTC GTACTCGGCAACGATTTTGCCTCGGGCGGACGCGGCACGACTCTCGATACCGTCGTGGAGAATACCCAAACCCTACTGGT GTTCGGTGCGCTCTCTCCGCGCACTGCGCAGAACGAGGCGGGTGGCGTTGCCAAGCATAAGCTGGAAGGCTATCTGCGCC AGATCGCGGATCGGGGAATACGGGTGATCCTGATTTCCCCTTGCCGCGACGACGTGCCGGAATTCCTGAACGCCGAGTGG TGGCCGATCCGGCCTGGGACCGATGCGGCACTTCTGCTGGCGCTGACGCGGGAGTTGGTTCGCTCCGGCCGTGCCGATCT CGACTTCCTCAACCGTTATTGCAGCGGCTCGGAGCGGTTCCTGTCCTATCTGGCCGGCGAAACCGACGGACAGGAGAAGA CGGCCGAATGGGCCGAAGCGATCACCGGCATTCCCGGCGCGGCCATTCGCGGCTTGGCCCCTACGATTGCCGACACCCGG ACGATGATTACCCTCAGCTGGGCCCTGCAGCGTGCCGACCATGGTGAGCAGCCTTATTGGGCGGCCATTGCTCTTGCCGC GGCAGCGGGGCAGATCGGCCTGCCAGGCGGTGGTTTCGGTTTCGGTTTTGGATCGGTTTCCGGGAACGGTTCTCCCTATG GGGTCATTCAGGCACCGGCGCTGCCTCAGTTGAAGAATCCGATCAGGAGCTTCATTCCTGTCGCGCGGATCGCCGACATG CTTCTCAACCCGGGCCAGCCTTTCGATTACTCGGGCGCAAGCTACACCTATCCCGATGCACGCCTGATTTATTGGGCAGG CGGAAATCCGTTCCACCACCATCAGGATCTGAACAGGCTCGATCGGGCGTGGGCGATTCCAGAAACCGTCATCGTACAGG ATCCGGTGCGAACGGCGACGGTGGACCGGGCCGATATCGTGCTGCCAGCCTGCACGACGCTGGAGCGATGTGATATCGGC GCCAGCCGCAGGTCCGACTATATCGTGGCCATGAAGAAGGTGGTCGATCCGATCGGCGAGGCACGTTCGGACTATGCGAT CGTCTCGGAGATCGCGCGCGCGCTCGGCGTCGAAGCACAGTTCACCGAAGGCCGGGACGAAATGGGCTGGCTGCGCCATC TCTACGAGAACAGCAGGACGGATGCAGCTGAGCGGCTTAATTGGGACATGCCCGCTTTCGACGAGTTCTGGACGCGGGGA TGGGTTCAGGTTCCGATGCTTTCCAAGCAGGTCTATCTCGCGGATTTTCGCCAGGATCCCGAAAAGCATCCGCTGGGCAC CGGTACCGGACGCATTATCCTTTCGAGCGAAACTCTCGAAACTCATGGTTATGATGACTTCCTGCCGTATCCGGCCTGGA TCCCGCCTCGGCCTGAAGTGGGCCAAGGACCTTTGTACCTTCTGACACCTCAGCCCCAGGGGCGGCTCCATAGCCAGCTC GACGGCGGCGTTGCGAGCCTTGCGGAAAAGACGGACGGCCTGGAGCGGCTGCGCATCAATACCACCGATGCGCGCGCGCT GGGGATCGAGAGTGGCGTGACTGTCCTGATCAGAAACGATCGCGGCCGCTGTCTGGCCGCGGCCGATGTGTCCGACGACG TCATGCCGGGTGTGGTGTGCCTGCCCACGGGATCGCGGCTTCAATTCGCCGCCGACGGTTCGGATCTGGAAATTTCGGGC AATCCCAACGTGCTGACGGCGGACATACCCGCCTCCAGCTTCAGCCAGGGCTGTGCCGCCCAAAGCTGCCGCGTTTGGGT GGAGCGCTGGAAGGCGCCTGAACATTCAGGGCTCGAAACGGGCCAAAGGGGGTCGAAGCATGAAAACGAGACATAA
Upstream 100 bases:
>100_bases CAGCCGATTACGGCCGCGCTTGTGAACAGCGTCGCCGCTTGAGCTTTTTGGCTCCGTCTGACGAGGCGGAGCCAAAATTG CCTATAGCCGGGGTATTACC
Downstream 100 bases:
>100_bases GGCCGACGTAGCTATTATCGGCGGAGGTATCATCGGCCTGGCCATCGCTTACGAGCTCAAGATGAGAGGCTGTTCGCCGG TCGTTCTTGAACGGGGCATC
Product: molybdopterin oxidoreductase
Products: Biotin [C]
Alternate protein names: BDS reductase; BSO reductase [H]
Number of amino acids: Translated: 771; Mature: 770
Protein sequence:
>771_residues MGQAQKILHSSHWGIFFAVVENGRIVDIEPFKGDPAPSPLLASIPEWTNAETRVLRPMVREGWLRAHDAGRPQDNRDRRG KDEFIEVSWPQAIELIASEINRVRTELGNSSIFAGSYGWTSAGRFHHAASQIKRLLNLVGGYTGHVDTYSIAAGPVLLRF VLGNDFASGGRGTTLDTVVENTQTLLVFGALSPRTAQNEAGGVAKHKLEGYLRQIADRGIRVILISPCRDDVPEFLNAEW WPIRPGTDAALLLALTRELVRSGRADLDFLNRYCSGSERFLSYLAGETDGQEKTAEWAEAITGIPGAAIRGLAPTIADTR TMITLSWALQRADHGEQPYWAAIALAAAAGQIGLPGGGFGFGFGSVSGNGSPYGVIQAPALPQLKNPIRSFIPVARIADM LLNPGQPFDYSGASYTYPDARLIYWAGGNPFHHHQDLNRLDRAWAIPETVIVQDPVRTATVDRADIVLPACTTLERCDIG ASRRSDYIVAMKKVVDPIGEARSDYAIVSEIARALGVEAQFTEGRDEMGWLRHLYENSRTDAAERLNWDMPAFDEFWTRG WVQVPMLSKQVYLADFRQDPEKHPLGTGTGRIILSSETLETHGYDDFLPYPAWIPPRPEVGQGPLYLLTPQPQGRLHSQL DGGVASLAEKTDGLERLRINTTDARALGIESGVTVLIRNDRGRCLAAADVSDDVMPGVVCLPTGSRLQFAADGSDLEISG NPNVLTADIPASSFSQGCAAQSCRVWVERWKAPEHSGLETGQRGSKHENET
Sequences:
>Translated_771_residues MGQAQKILHSSHWGIFFAVVENGRIVDIEPFKGDPAPSPLLASIPEWTNAETRVLRPMVREGWLRAHDAGRPQDNRDRRG KDEFIEVSWPQAIELIASEINRVRTELGNSSIFAGSYGWTSAGRFHHAASQIKRLLNLVGGYTGHVDTYSIAAGPVLLRF VLGNDFASGGRGTTLDTVVENTQTLLVFGALSPRTAQNEAGGVAKHKLEGYLRQIADRGIRVILISPCRDDVPEFLNAEW WPIRPGTDAALLLALTRELVRSGRADLDFLNRYCSGSERFLSYLAGETDGQEKTAEWAEAITGIPGAAIRGLAPTIADTR TMITLSWALQRADHGEQPYWAAIALAAAAGQIGLPGGGFGFGFGSVSGNGSPYGVIQAPALPQLKNPIRSFIPVARIADM LLNPGQPFDYSGASYTYPDARLIYWAGGNPFHHHQDLNRLDRAWAIPETVIVQDPVRTATVDRADIVLPACTTLERCDIG ASRRSDYIVAMKKVVDPIGEARSDYAIVSEIARALGVEAQFTEGRDEMGWLRHLYENSRTDAAERLNWDMPAFDEFWTRG WVQVPMLSKQVYLADFRQDPEKHPLGTGTGRIILSSETLETHGYDDFLPYPAWIPPRPEVGQGPLYLLTPQPQGRLHSQL DGGVASLAEKTDGLERLRINTTDARALGIESGVTVLIRNDRGRCLAAADVSDDVMPGVVCLPTGSRLQFAADGSDLEISG NPNVLTADIPASSFSQGCAAQSCRVWVERWKAPEHSGLETGQRGSKHENET >Mature_770_residues GQAQKILHSSHWGIFFAVVENGRIVDIEPFKGDPAPSPLLASIPEWTNAETRVLRPMVREGWLRAHDAGRPQDNRDRRGK DEFIEVSWPQAIELIASEINRVRTELGNSSIFAGSYGWTSAGRFHHAASQIKRLLNLVGGYTGHVDTYSIAAGPVLLRFV LGNDFASGGRGTTLDTVVENTQTLLVFGALSPRTAQNEAGGVAKHKLEGYLRQIADRGIRVILISPCRDDVPEFLNAEWW PIRPGTDAALLLALTRELVRSGRADLDFLNRYCSGSERFLSYLAGETDGQEKTAEWAEAITGIPGAAIRGLAPTIADTRT MITLSWALQRADHGEQPYWAAIALAAAAGQIGLPGGGFGFGFGSVSGNGSPYGVIQAPALPQLKNPIRSFIPVARIADML LNPGQPFDYSGASYTYPDARLIYWAGGNPFHHHQDLNRLDRAWAIPETVIVQDPVRTATVDRADIVLPACTTLERCDIGA SRRSDYIVAMKKVVDPIGEARSDYAIVSEIARALGVEAQFTEGRDEMGWLRHLYENSRTDAAERLNWDMPAFDEFWTRGW VQVPMLSKQVYLADFRQDPEKHPLGTGTGRIILSSETLETHGYDDFLPYPAWIPPRPEVGQGPLYLLTPQPQGRLHSQLD GGVASLAEKTDGLERLRINTTDARALGIESGVTVLIRNDRGRCLAAADVSDDVMPGVVCLPTGSRLQFAADGSDLEISGN PNVLTADIPASSFSQGCAAQSCRVWVERWKAPEHSGLETGQRGSKHENET
Specific function: This enzyme may serve as a scavenger, allowing the cell to utilize biotin sulfoxide as a biotin source. It reduces a spontaneous oxidation product of biotin, D-biotin D-sulfoxide (BSO or BDS), back to biotin [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Periplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI87081994, Length=773, Percent_Identity=37.51617076326, Blast_Score=481, Evalue=1e-137, Organism=Escherichia coli, GI145693196, Length=768, Percent_Identity=36.0677083333333, Blast_Score=458, Evalue=1e-130, Organism=Escherichia coli, GI1787231, Length=776, Percent_Identity=37.5, Blast_Score=417, Evalue=1e-117, Organism=Escherichia coli, GI87081797, Length=715, Percent_Identity=31.4685314685315, Blast_Score=258, Evalue=8e-70, Organism=Escherichia coli, GI171474008, Length=720, Percent_Identity=28.0555555555556, Blast_Score=222, Evalue=6e-59, Organism=Escherichia coli, GI1787870, Length=725, Percent_Identity=28.1379310344828, Blast_Score=211, Evalue=1e-55, Organism=Escherichia coli, GI3868721, Length=706, Percent_Identity=23.0878186968839, Blast_Score=105, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006658 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006655 [H]
Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: 1.7.2.3 [C]
Molecular weight: Translated: 84255; Mature: 84124
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQAQKILHSSHWGIFFAVVENGRIVDIEPFKGDPAPSPLLASIPEWTNAETRVLRPMVR CCHHHHHHHCCCCEEEEEEECCCEEEEEECCCCCCCCCCHHHCCCCCCCCHHHHHHHHHH EGWLRAHDAGRPQDNRDRRGKDEFIEVSWPQAIELIASEINRVRTELGNSSIFAGSYGWT HCCHHHCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCC SAGRFHHAASQIKRLLNLVGGYTGHVDTYSIAAGPVLLRFVLGNDFASGGRGTTLDTVVE CCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHHC NTQTLLVFGALSPRTAQNEAGGVAKHKLEGYLRQIADRGIRVILISPCRDDVPEFLNAEW CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCC WPIRPGTDAALLLALTRELVRSGRADLDFLNRYCSGSERFLSYLAGETDGQEKTAEWAEA EECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHH ITGIPGAAIRGLAPTIADTRTMITLSWALQRADHGEQPYWAAIALAAAAGQIGLPGGGFG HHCCCCHHHHCCCCHHCCCCEEEEHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCC FGFGSVSGNGSPYGVIQAPALPQLKNPIRSFIPVARIADMLLNPGQPFDYSGASYTYPDA CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCC RLIYWAGGNPFHHHQDLNRLDRAWAIPETVIVQDPVRTATVDRADIVLPACTTLERCDIG EEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHCCCCCCEEECCCCCHHHHCCC ASRRSDYIVAMKKVVDPIGEARSDYAIVSEIARALGVEAQFTEGRDEMGWLRHLYENSRT CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHCCCC DAAERLNWDMPAFDEFWTRGWVQVPMLSKQVYLADFRQDPEKHPLGTGTGRIILSSETLE CHHHHCCCCCCCHHHHHCCCCEECCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCC THGYDDFLPYPAWIPPRPEVGQGPLYLLTPQPQGRLHSQLDGGVASLAEKTDGLERLRIN CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHCCHHHHHHHHCCCCCEEEEC TTDARALGIESGVTVLIRNDRGRCLAAADVSDDVMPGVVCLPTGSRLQFAADGSDLEISG CCCCHHEECCCCCEEEEECCCCCEEEECCCCCCCCCCEEEECCCCCEEEEECCCEEEECC NPNVLTADIPASSFSQGCAAQSCRVWVERWKAPEHSGLETGQRGSKHENET CCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GQAQKILHSSHWGIFFAVVENGRIVDIEPFKGDPAPSPLLASIPEWTNAETRVLRPMVR CHHHHHHHCCCCEEEEEEECCCEEEEEECCCCCCCCCCHHHCCCCCCCCHHHHHHHHHH EGWLRAHDAGRPQDNRDRRGKDEFIEVSWPQAIELIASEINRVRTELGNSSIFAGSYGWT HCCHHHCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCC SAGRFHHAASQIKRLLNLVGGYTGHVDTYSIAAGPVLLRFVLGNDFASGGRGTTLDTVVE CCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHHC NTQTLLVFGALSPRTAQNEAGGVAKHKLEGYLRQIADRGIRVILISPCRDDVPEFLNAEW CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCC WPIRPGTDAALLLALTRELVRSGRADLDFLNRYCSGSERFLSYLAGETDGQEKTAEWAEA EECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHH ITGIPGAAIRGLAPTIADTRTMITLSWALQRADHGEQPYWAAIALAAAAGQIGLPGGGFG HHCCCCHHHHCCCCHHCCCCEEEEHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCC FGFGSVSGNGSPYGVIQAPALPQLKNPIRSFIPVARIADMLLNPGQPFDYSGASYTYPDA CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCC RLIYWAGGNPFHHHQDLNRLDRAWAIPETVIVQDPVRTATVDRADIVLPACTTLERCDIG EEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHCCCCCCEEECCCCCHHHHCCC ASRRSDYIVAMKKVVDPIGEARSDYAIVSEIARALGVEAQFTEGRDEMGWLRHLYENSRT CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHCCCC DAAERLNWDMPAFDEFWTRGWVQVPMLSKQVYLADFRQDPEKHPLGTGTGRIILSSETLE CHHHHCCCCCCCHHHHHCCCCEECCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCC THGYDDFLPYPAWIPPRPEVGQGPLYLLTPQPQGRLHSQLDGGVASLAEKTDGLERLRIN CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHCCHHHHHHHHCCCCCEEEEC TTDARALGIESGVTVLIRNDRGRCLAAADVSDDVMPGVVCLPTGSRLQFAADGSDLEISG CCCCHHEECCCCCEEEEECCCCCEEEECCCCCCCCCCEEEECCCCCEEEEECCCEEEECC NPNVLTADIPASSFSQGCAAQSCRVWVERWKAPEHSGLETGQRGSKHENET CCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: A Spontaneous Oxidation Product Of Biotin, D-Biotin D-Sulfoxide (Bso Or Bds) [C]
Specific reaction: Reduces A Spontaneous Oxidation Product Of Biotin, D-Biotin D-Sulfoxide (Bso Or Bds), Back To Biotin. [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7733660 [H]