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The map label for this gene is dppC [H]

Identifier: 110634959

GI number: 110634959

Start: 2831507

End: 2832373

Strand: Reverse

Name: dppC [H]

Synonym: Meso_2625

Alternate gene names: 110634959

Gene position: 2832373-2831507 (Counterclockwise)

Preceding gene: 110634960

Following gene: 110634958

Centisome position: 64.19

GC content: 61.36

Gene sequence:

>867_bases
ATGACGAGAAACATCTCCATTCTTCTCAATACGCTGCGCCGGACGGCGCAGTATCCAAGCGGCGCCATCGGCCTGGCGCT
AGTGACGACAATCCTTTTGGTGGCGCTCTTCGCGCCGTTGCTGGCGCCCTACGATCCGAACAAGCTTGACCTCGTCAATC
GTCTGTCCGGTGTGTCGGCCGAGCATTGGTTGGGAACCGACCAGCTTGGACGCGACCTGCTGAGCCGCCACATCTATGGC
ACGCAGGTAGCCGTCGTGGTGGCGCTTTCGGTGATCGCGATCGCCCTGGCCATTGGTATGACGCTCGGCATTCTGTCGGC
CTATGTACCAGGCCCCATCGAGCGCTTCATCCTGATCTCCTTCGATTCGGTGTCGTCCTTTCCCAGCGTGATCCTGGCCA
TGGCCGCCGTCGCCGTGCTCGGTTCATCGATGCCAATGCTGATCATCGTCATAGCCACCAGCCTTGTGCCCCATTATGGG
CGCGTTGCGCGGGCGCAGGTGCTCTCGGTCAAAAACGAGCCCTATATTGAAGCCGAAACGGTGTTCGGCGCCTCCGAGCT
GCGCATCCTGTTCTTTCATATCGTGCCCAATATCCTGGCGCCGCTGATCGTCATCGCTTCCCTCGATATCCCGATCGTCA
TCGCCATCGAAGCCAGCCTGTCCTTTCTGGGCCTGGGCCTGCGTCCGCCGCTGGCGAGCTGGGGCGGGCTGCTGCAGGAC
GGCTATCAAAATATCTCCAAGTCGGTGCTGCCGGTGCTGATCTCCAGCACGGCCCTGGCGATCGCCACCCTGGCCTTCAC
CATGTTCGGGGAAGCCCTGCGCCATGCCATCGACCCACGTTCGCAGCGTGGAGGCAAGAATGACTGA

Upstream 100 bases:

>100_bases
CGGTTTTCATCGTCGTTGTCATTTTCGTCGCCATCAATCTGCTGACTGAACTCAGCTATTCGTTCTTCGACCCTCGTATC
CGATACAACCGGCGGTGAGT

Downstream 100 bases:

>100_bases
GCCGTTTTTGTCCATTACCGATCTGCGCCTGACGGCCAAGACCGATAGGGGCACTGCTTCAATCCTGCGCGGCATCAATC
TCTCGGTCGAGCGCGGCCGG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MTRNISILLNTLRRTAQYPSGAIGLALVTTILLVALFAPLLAPYDPNKLDLVNRLSGVSAEHWLGTDQLGRDLLSRHIYG
TQVAVVVALSVIAIALAIGMTLGILSAYVPGPIERFILISFDSVSSFPSVILAMAAVAVLGSSMPMLIIVIATSLVPHYG
RVARAQVLSVKNEPYIEAETVFGASELRILFFHIVPNILAPLIVIASLDIPIVIAIEASLSFLGLGLRPPLASWGGLLQD
GYQNISKSVLPVLISSTALAIATLAFTMFGEALRHAIDPRSQRGGKND

Sequences:

>Translated_288_residues
MTRNISILLNTLRRTAQYPSGAIGLALVTTILLVALFAPLLAPYDPNKLDLVNRLSGVSAEHWLGTDQLGRDLLSRHIYG
TQVAVVVALSVIAIALAIGMTLGILSAYVPGPIERFILISFDSVSSFPSVILAMAAVAVLGSSMPMLIIVIATSLVPHYG
RVARAQVLSVKNEPYIEAETVFGASELRILFFHIVPNILAPLIVIASLDIPIVIAIEASLSFLGLGLRPPLASWGGLLQD
GYQNISKSVLPVLISSTALAIATLAFTMFGEALRHAIDPRSQRGGKND
>Mature_287_residues
TRNISILLNTLRRTAQYPSGAIGLALVTTILLVALFAPLLAPYDPNKLDLVNRLSGVSAEHWLGTDQLGRDLLSRHIYGT
QVAVVVALSVIAIALAIGMTLGILSAYVPGPIERFILISFDSVSSFPSVILAMAAVAVLGSSMPMLIIVIATSLVPHYGR
VARAQVLSVKNEPYIEAETVFGASELRILFFHIVPNILAPLIVIASLDIPIVIAIEASLSFLGLGLRPPLASWGGLLQDG
YQNISKSVLPVLISSTALAIATLAFTMFGEALRHAIDPRSQRGGKND

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=261, Percent_Identity=39.463601532567, Blast_Score=186, Evalue=1e-48,
Organism=Escherichia coli, GI1787054, Length=255, Percent_Identity=36.4705882352941, Blast_Score=173, Evalue=1e-44,
Organism=Escherichia coli, GI1789889, Length=238, Percent_Identity=34.8739495798319, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI1789964, Length=258, Percent_Identity=36.8217054263566, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1787498, Length=279, Percent_Identity=31.5412186379928, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1787549, Length=281, Percent_Identity=28.8256227758007, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1788505, Length=229, Percent_Identity=30.5676855895196, Blast_Score=85, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30624; Mature: 30492

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRNISILLNTLRRTAQYPSGAIGLALVTTILLVALFAPLLAPYDPNKLDLVNRLSGVSA
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCH
EHWLGTDQLGRDLLSRHIYGTQVAVVVALSVIAIALAIGMTLGILSAYVPGPIERFILIS
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEE
FDSVSSFPSVILAMAAVAVLGSSMPMLIIVIATSLVPHYGRVARAQVLSVKNEPYIEAET
EHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHH
VFGASELRILFFHIVPNILAPLIVIASLDIPIVIAIEASLSFLGLGLRPPLASWGGLLQD
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHCCCCCCCHHHHHHHHHH
GYQNISKSVLPVLISSTALAIATLAFTMFGEALRHAIDPRSQRGGKND
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC
>Mature Secondary Structure 
TRNISILLNTLRRTAQYPSGAIGLALVTTILLVALFAPLLAPYDPNKLDLVNRLSGVSA
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCH
EHWLGTDQLGRDLLSRHIYGTQVAVVVALSVIAIALAIGMTLGILSAYVPGPIERFILIS
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEE
FDSVSSFPSVILAMAAVAVLGSSMPMLIIVIATSLVPHYGRVARAQVLSVKNEPYIEAET
EHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHH
VFGASELRILFFHIVPNILAPLIVIASLDIPIVIAIEASLSFLGLGLRPPLASWGGLLQD
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHCCCCCCCHHHHHHHHHH
GYQNISKSVLPVLISSTALAIATLAFTMFGEALRHAIDPRSQRGGKND
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]