Click here to switch to the map view.

The map label for this gene is 110634928

Identifier: 110634928

GI number: 110634928

Start: 2787662

End: 2789188

Strand: Reverse

Name: 110634928

Synonym: Meso_2587

Alternate gene names: NA

Gene position: 2789188-2787662 (Counterclockwise)

Preceding gene: 110634929

Following gene: 110634927

Centisome position: 63.21

GC content: 60.64

Gene sequence:

>1527_bases
ATGTCGGGTAAGACGGAGCGGCTGGAAGGCGCGCGAGCGCCGGGAAGACGGTTTTCACTCCGTATTCCCTCGATCGTCGG
CAGCGGCCTTTGGGCGCTGTCGGCAAAGCTGGTGACCCAGGTTTGCCAGCTTGCGGCCTTCATCATTGCAGCCCATGTGC
TTACTCCCGCGCAATTCGGCCTTTTTGCCTTCTGCTCCGCCATCGCAATCCTCCTCGTTATGCTCGCAGAAGGTGGATGG
GCGGAATTCGTCATGAAGTCTTCCGAAGGCGAAGCTCATCTCGACCAGATCGCTGGCATGTCGCTCGCAAGCGGTCTCTT
TTTCATGATTGTCGGTCTTCTCACCGCCGGCGTTCTGCATGGCGCGTTCGGCAAAAGCTGGGAGGCGTTCCTGCTGGCGC
TCTTTTCGTGCTGGATCCTGCCGGCCGCGCTCACCACCGTCTATGACGGCGTTCTTGTGCAGCAGGGAAAACTGAAACGG
CAGGCGATGATCCGGATCACCGCCGAGCTGGCCGGCCTTGCCCTAATCGTGTTCGGCCTCAGGGAAGGCTGGAATGTCTT
CGCCCTTGCGGCCGGGCGGCTCGCAATGCAGATGGTTCTCCTCTCAGGTTCCGTTGCGGCGATTGGGTTCGTGGGGCTTG
CCAGGCCATCCCGGACAGTTTTGCGCGAGGTCCTGCATTTCTCTCAGCAGATTATCTTCAATCGTCTGATCGTCTTCTTC
CGCTCCTATTCGGGAACGCTTGCCGTCGGCGGTTTTCTCGGCCTTACGGAGGCTGGCTATTATCGGGCCGCGGAGCGCAT
AGTAGCTGCCTTTTCGGAACTTGTCGGCGAACCGGCACGGTTGCTCGGCTGGGTGCTCTTCCGTCGCGCCAAGGAACGGC
AAGAAAAGGCGGCGGACCACGAGGACCTCGTTCGAAACGCCGGCGCGAGTTTCTTTCCTGTCCTCATCGCGGTTGCTGCG
CCGGTTTATCTTGGGCTGGCGGTGGTATCGGAAAGCTTCGTGGAAGTGGCTCTCGGGGAGGCATGGAAACCGGCTGCGCT
GCTGGTTGGTGTGCTCGCGGCAAAACAGCTGCTGCTTGTCACCAGTTATCCGACGGAGCCCTTGCTGGCGGTCCGAGGCA
AACTCAAAGCTCTAGCACCGATATCGCTTTTCAATGCGCTGGTCTCAGTGGGACTCATAATCCTGCTCTCGCCTTTTGGC
GTGGTTGCGGTGGCTCTCGGGCAGTGCGTGGCCGCAGCCATCGCGCTGGCCACCTCCATTTGGGTGCAGCAGCGCCACGG
GGGGCTGAATTGGTGGGAGATCGCAAGGAACAGCGCGCTCCTGCTCTTTGCGCTCGGAGCAATGCTCGTCGCCATCCTCT
ATCTTGGCCGGGTCACCAGTTTCTTCGAGTTGCGGCCTACATTCGTCTTCCTCCTGCAGGTGGGGGTGGGTGCGATCACC
TATCTCGCAGCGGTTTTCGCCCTCTGGAGGTTCGCGGGCTTGGCATGGCTGCATTGGCCGACGAGGAGCATCGATGATCC
GATCTAA

Upstream 100 bases:

>100_bases
GCAATCTGCAAGGGAATCTAGCGGATGAAAGGGCAACCGTGAATATGGAGATGCAAGCCACTGGCGAGGATGTTGATAAG
CAGCGGGCGCGGGGGTGAAA

Downstream 100 bases:

>100_bases
TGTTCTTGCTCGCCCGCGGACGTTTTCTAAAATCGCGGTGGCGACGCTTCGCTCAACGCTTCTCCCATTGCGTCTAGTCC
GGGGGCGACTTCGTTATCTC

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: Polysaccharide Transporter

Number of amino acids: Translated: 508; Mature: 507

Protein sequence:

>508_residues
MSGKTERLEGARAPGRRFSLRIPSIVGSGLWALSAKLVTQVCQLAAFIIAAHVLTPAQFGLFAFCSAIAILLVMLAEGGW
AEFVMKSSEGEAHLDQIAGMSLASGLFFMIVGLLTAGVLHGAFGKSWEAFLLALFSCWILPAALTTVYDGVLVQQGKLKR
QAMIRITAELAGLALIVFGLREGWNVFALAAGRLAMQMVLLSGSVAAIGFVGLARPSRTVLREVLHFSQQIIFNRLIVFF
RSYSGTLAVGGFLGLTEAGYYRAAERIVAAFSELVGEPARLLGWVLFRRAKERQEKAADHEDLVRNAGASFFPVLIAVAA
PVYLGLAVVSESFVEVALGEAWKPAALLVGVLAAKQLLLVTSYPTEPLLAVRGKLKALAPISLFNALVSVGLIILLSPFG
VVAVALGQCVAAAIALATSIWVQQRHGGLNWWEIARNSALLLFALGAMLVAILYLGRVTSFFELRPTFVFLLQVGVGAIT
YLAAVFALWRFAGLAWLHWPTRSIDDPI

Sequences:

>Translated_508_residues
MSGKTERLEGARAPGRRFSLRIPSIVGSGLWALSAKLVTQVCQLAAFIIAAHVLTPAQFGLFAFCSAIAILLVMLAEGGW
AEFVMKSSEGEAHLDQIAGMSLASGLFFMIVGLLTAGVLHGAFGKSWEAFLLALFSCWILPAALTTVYDGVLVQQGKLKR
QAMIRITAELAGLALIVFGLREGWNVFALAAGRLAMQMVLLSGSVAAIGFVGLARPSRTVLREVLHFSQQIIFNRLIVFF
RSYSGTLAVGGFLGLTEAGYYRAAERIVAAFSELVGEPARLLGWVLFRRAKERQEKAADHEDLVRNAGASFFPVLIAVAA
PVYLGLAVVSESFVEVALGEAWKPAALLVGVLAAKQLLLVTSYPTEPLLAVRGKLKALAPISLFNALVSVGLIILLSPFG
VVAVALGQCVAAAIALATSIWVQQRHGGLNWWEIARNSALLLFALGAMLVAILYLGRVTSFFELRPTFVFLLQVGVGAIT
YLAAVFALWRFAGLAWLHWPTRSIDDPI
>Mature_507_residues
SGKTERLEGARAPGRRFSLRIPSIVGSGLWALSAKLVTQVCQLAAFIIAAHVLTPAQFGLFAFCSAIAILLVMLAEGGWA
EFVMKSSEGEAHLDQIAGMSLASGLFFMIVGLLTAGVLHGAFGKSWEAFLLALFSCWILPAALTTVYDGVLVQQGKLKRQ
AMIRITAELAGLALIVFGLREGWNVFALAAGRLAMQMVLLSGSVAAIGFVGLARPSRTVLREVLHFSQQIIFNRLIVFFR
SYSGTLAVGGFLGLTEAGYYRAAERIVAAFSELVGEPARLLGWVLFRRAKERQEKAADHEDLVRNAGASFFPVLIAVAAP
VYLGLAVVSESFVEVALGEAWKPAALLVGVLAAKQLLLVTSYPTEPLLAVRGKLKALAPISLFNALVSVGLIILLSPFGV
VAVALGQCVAAAIALATSIWVQQRHGGLNWWEIARNSALLLFALGAMLVAILYLGRVTSFFELRPTFVFLLQVGVGAITY
LAAVFALWRFAGLAWLHWPTRSIDDPI

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54494; Mature: 54363

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGKTERLEGARAPGRRFSLRIPSIVGSGLWALSAKLVTQVCQLAAFIIAAHVLTPAQFG
CCCCCCHHCCCCCCCCEEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
LFAFCSAIAILLVMLAEGGWAEFVMKSSEGEAHLDQIAGMSLASGLFFMIVGLLTAGVLH
HHHHHHHHHHHHHHHHCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAFGKSWEAFLLALFSCWILPAALTTVYDGVLVQQGKLKRQAMIRITAELAGLALIVFGL
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
REGWNVFALAAGRLAMQMVLLSGSVAAIGFVGLARPSRTVLREVLHFSQQIIFNRLIVFF
HCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RSYSGTLAVGGFLGLTEAGYYRAAERIVAAFSELVGEPARLLGWVLFRRAKERQEKAADH
HHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCH
EDLVRNAGASFFPVLIAVAAPVYLGLAVVSESFVEVALGEAWKPAALLVGVLAAKQLLLV
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEE
TSYPTEPLLAVRGKLKALAPISLFNALVSVGLIILLSPFGVVAVALGQCVAAAIALATSI
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVQQRHGGLNWWEIARNSALLLFALGAMLVAILYLGRVTSFFELRPTFVFLLQVGVGAIT
HHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLAAVFALWRFAGLAWLHWPTRSIDDPI
HHHHHHHHHHHHHHHHEECCCCCCCCCC
>Mature Secondary Structure 
SGKTERLEGARAPGRRFSLRIPSIVGSGLWALSAKLVTQVCQLAAFIIAAHVLTPAQFG
CCCCCHHCCCCCCCCEEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
LFAFCSAIAILLVMLAEGGWAEFVMKSSEGEAHLDQIAGMSLASGLFFMIVGLLTAGVLH
HHHHHHHHHHHHHHHHCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAFGKSWEAFLLALFSCWILPAALTTVYDGVLVQQGKLKRQAMIRITAELAGLALIVFGL
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
REGWNVFALAAGRLAMQMVLLSGSVAAIGFVGLARPSRTVLREVLHFSQQIIFNRLIVFF
HCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RSYSGTLAVGGFLGLTEAGYYRAAERIVAAFSELVGEPARLLGWVLFRRAKERQEKAADH
HHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCH
EDLVRNAGASFFPVLIAVAAPVYLGLAVVSESFVEVALGEAWKPAALLVGVLAAKQLLLV
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEE
TSYPTEPLLAVRGKLKALAPISLFNALVSVGLIILLSPFGVVAVALGQCVAAAIALATSI
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVQQRHGGLNWWEIARNSALLLFALGAMLVAILYLGRVTSFFELRPTFVFLLQVGVGAIT
HHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLAAVFALWRFAGLAWLHWPTRSIDDPI
HHHHHHHHHHHHHHHHEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA