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The map label for this gene is exsH [H]

Identifier: 110634919

GI number: 110634919

Start: 2767442

End: 2768275

Strand: Direct

Name: exsH [H]

Synonym: Meso_2578

Alternate gene names: 110634919

Gene position: 2767442-2768275 (Clockwise)

Preceding gene: 110634914

Following gene: 110634920

Centisome position: 62.72

GC content: 57.43

Gene sequence:

>834_bases
ATGTTTCATGGACCGTATCCTTGCAGCCGGAAACAAGCGCTGCCGCGAATGGCCACGCTGATTGCGTCGGTTCTCACGCT
GGCGATCTCCAGCGCCGCGTCCGCCATAGCTGCGGAAGAAGATGAGCTCGACCTCGGCCAGATGAGCCTTTCATTTGAGG
AGGAGTTCGATACGCTCAGCGTCTCCGCATGGGGACCCGGCACGCGCTGGATCGCGCATACACCCTGGTCTGGCGACTTC
GGAGGCGCTCGCTTCGCCAATCCGGAAGAGGCATTTCCCTTTACCATTGAGGACGGGGTTCTTCGCATCGAGGCACGTAA
GGATGCCGAGGGCGAGTGGCAGTCCGGCCTGCTTGCGTCGGTCGATCCGAAAGGAAATGGGTTTGCCCAGCAATACGGCT
ATTTCGAAATGAGAGCTCGCCTCCCGGAAGGCCCGGGGCTTTGGCCCGCCTTCTGGCTGATTGGCAAGGACCGCTCAGAA
TTCACCGCAGAAATCGATGTGATAGAGTTTTACGGCGACAAGCCGGAAGGCTATTCATCCGTCGTGCATGTCTGGTATCG
CGATGGGAACCATTATTCGCGTTTCAGGCGAAACGAAGTCTTTCCAGCCGCCGATCCCAAAGACTTCCATACCTATGGCG
TTCACGTGGGCCCGAATTGGATCCGCTTCTATTTCGACCAGAAGTTCATGTGGAAGACTGAGACGCAGGCGGAACACAGG
CAGCCGCTTTATCTCCTCCTCAACCTCGCAATGGTCGATGGACCGTCGAAGGATCAGGCGCCCAATCCCTCCTACATGTA
TGTGGATTATGTCCGAGCCTATCGCTTGGACTGA

Upstream 100 bases:

>100_bases
CCACCGCCCGCTACCTCTTATGATGGACCGGCGAGCGGCTTTCGCGTGACTACTGGCCTTCTGCTGTCCGGCTATAATGA
TGGCTGGAGGTTCCGCGCCG

Downstream 100 bases:

>100_bases
CGGCATGCCTGAGCCGGGCAGGTAGCCTATCAAACACTCCTCTTCGCCGAAGGGCCTACCTCGTCCGCGGCATACAGCTT
CCGGTCAGGCAATGCTCATC

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Succinoglycan biosynthesis protein exsH [H]

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MFHGPYPCSRKQALPRMATLIASVLTLAISSAASAIAAEEDELDLGQMSLSFEEEFDTLSVSAWGPGTRWIAHTPWSGDF
GGARFANPEEAFPFTIEDGVLRIEARKDAEGEWQSGLLASVDPKGNGFAQQYGYFEMRARLPEGPGLWPAFWLIGKDRSE
FTAEIDVIEFYGDKPEGYSSVVHVWYRDGNHYSRFRRNEVFPAADPKDFHTYGVHVGPNWIRFYFDQKFMWKTETQAEHR
QPLYLLLNLAMVDGPSKDQAPNPSYMYVDYVRAYRLD

Sequences:

>Translated_277_residues
MFHGPYPCSRKQALPRMATLIASVLTLAISSAASAIAAEEDELDLGQMSLSFEEEFDTLSVSAWGPGTRWIAHTPWSGDF
GGARFANPEEAFPFTIEDGVLRIEARKDAEGEWQSGLLASVDPKGNGFAQQYGYFEMRARLPEGPGLWPAFWLIGKDRSE
FTAEIDVIEFYGDKPEGYSSVVHVWYRDGNHYSRFRRNEVFPAADPKDFHTYGVHVGPNWIRFYFDQKFMWKTETQAEHR
QPLYLLLNLAMVDGPSKDQAPNPSYMYVDYVRAYRLD
>Mature_277_residues
MFHGPYPCSRKQALPRMATLIASVLTLAISSAASAIAAEEDELDLGQMSLSFEEEFDTLSVSAWGPGTRWIAHTPWSGDF
GGARFANPEEAFPFTIEDGVLRIEARKDAEGEWQSGLLASVDPKGNGFAQQYGYFEMRARLPEGPGLWPAFWLIGKDRSE
FTAEIDVIEFYGDKPEGYSSVVHVWYRDGNHYSRFRRNEVFPAADPKDFHTYGVHVGPNWIRFYFDQKFMWKTETQAEHR
QPLYLLLNLAMVDGPSKDQAPNPSYMYVDYVRAYRLD

Specific function: Cleaves high molecular weight succinoglycan to yield LMW succinoglycan. Dynamically regulate the molecular weight distribution of succinoglycan by cleaving nascent succinoglycan only during a limited period after its synthesis, perhaps before it undergoes

COG id: COG2273

COG function: function code G; Beta-glucanase/Beta-glucan synthetase

Gene ontology:

Cell location: Secreted. Note=Probably by a type-III secretion system [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 hemolysin-type calcium-binding repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008985
- InterPro:   IPR013320
- InterPro:   IPR000757
- InterPro:   IPR011049 [H]

Pfam domain/function: PF00722 Glyco_hydro_16 [H]

EC number: NA

Molecular weight: Translated: 31533; Mature: 31533

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHGPYPCSRKQALPRMATLIASVLTLAISSAASAIAAEEDELDLGQMSLSFEEEFDTLS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHCCCEEE
VSAWGPGTRWIAHTPWSGDFGGARFANPEEAFPFTIEDGVLRIEARKDAEGEWQSGLLAS
EEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCHHCCCEEE
VDPKGNGFAQQYGYFEMRARLPEGPGLWPAFWLIGKDRSEFTAEIDVIEFYGDKPEGYSS
ECCCCCCHHHHCCEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCCCCE
VVHVWYRDGNHYSRFRRNEVFPAADPKDFHTYGVHVGPNWIRFYFDQKFMWKTETQAEHR
EEEEEEECCCHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEEEECCCEEEECCCCHHHC
QPLYLLLNLAMVDGPSKDQAPNPSYMYVDYVRAYRLD
CCEEEEEEEHHCCCCCCCCCCCCCEEEEEEEEHCCCC
>Mature Secondary Structure
MFHGPYPCSRKQALPRMATLIASVLTLAISSAASAIAAEEDELDLGQMSLSFEEEFDTLS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHCCCEEE
VSAWGPGTRWIAHTPWSGDFGGARFANPEEAFPFTIEDGVLRIEARKDAEGEWQSGLLAS
EEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCHHCCCEEE
VDPKGNGFAQQYGYFEMRARLPEGPGLWPAFWLIGKDRSEFTAEIDVIEFYGDKPEGYSS
ECCCCCCHHHHCCEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCCCCE
VVHVWYRDGNHYSRFRRNEVFPAADPKDFHTYGVHVGPNWIRFYFDQKFMWKTETQAEHR
EEEEEEECCCHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEEEECCCEEEECCCCHHHC
QPLYLLLNLAMVDGPSKDQAPNPSYMYVDYVRAYRLD
CCEEEEEEEHHCCCCCCCCCCCCCEEEEEEEEHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11902715; 11481431; 9560202 [H]