| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634918
Identifier: 110634918
GI number: 110634918
Start: 2765826
End: 2767274
Strand: Reverse
Name: 110634918
Synonym: Meso_2577
Alternate gene names: NA
Gene position: 2767274-2765826 (Counterclockwise)
Preceding gene: 110634924
Following gene: 110634917
Centisome position: 62.72
GC content: 59.63
Gene sequence:
>1449_bases ATGAAGATCGAATTGATCGGCCTTTTGACGATCGCTCTGGGCATGATGACCTTTCTTGCCCCCGTTCATCGCGCATTCTC GATCATGGTATTGTCCACCCTGTTTGGCGCCGGCGCGGCTTTCAGCTTGCCGGGGCTGGGCGGGGCATCTGTTCTCGTGC CAAGCCTCTTTCTTGTCTTCTACGGCCTGCGCATGTTCCTCGCCTTTGGCGAAGGTCCTATCCTTGAGTCCCTGGCGCCG CCTCGGGCCGGGTTCTGGCTCCTGCTTCTGACAGCCTACGCGGTCGCGAGCGCGTTCTTCCTGCCGCGTCTCATGGAGGA TGTAACCGAGACCATGACGGTTCAGCGGCTTGCCGGCGGCCGCAGTTCTATTTCGCTTATTGCCCTGGAACCGTCGACGA ACAACATCACGCAGGCATTCTATGCATTGGGAGGACTTGCCTGCTTTGCGTTCACCTTCGCCTATCTGCGTTCGGCAGGT TCGCCCGCGCGTCTCGTCTATGCCATGCTCGCGCTGTCCGCTGCAAATCTGGGGTTTGCGGTTCTCGATGTGGTCACTTA CTACGCGGGCGCGGCTCACATCTTCGATTTTGTGCGGACAGCCAACTACGCACTGCTGACGGGCTCCGAGAAAGCTGGCT TCAAGCGCATTTCCGGCACCTTCTCCGAAGCTTCGGCCTTTGCAGGCTACACCTCGGTGCTCTTTGCTTTTATCGGCAGT CTCTGGCTCGACCGGGTGCGCTCGCTTTTAACGGGCAGCGTCGCGGTGCTTCTGCTCGCCGCCCTCCTCCTTTCCACCTC GGCCACCGGAATGGTGGCGTTGGCGGTTGTGGCCGTATATCTGGCCTTCAGATCGGTCGGAGAATCGATACGCAAAAGCC CGATTGGAAGACCCGCCTTCCTGGCCTCGACCGTTCTGGCAATCCCTCTCGTAAGTCTTTTTGTCCTGCTCGCCATGCCA GACCTGCTGGATAGCGTGGCAAGTTACCTGGACGAGATCCTCTTTTCCAAGCTCGAGAGCCACTCCGGCCGGGAGAGGTT CATGTGGAACGCGGTCGCATACCAGGTTTTCATCGATACCGGAGGGTGGGGCGCCGGGCTTGGAAGCGCGCGGGCGTCAA GTTATCTGCTCGTGCTTCTTTCCAATGTCGGCCTGCTAGGCACCGCGCTTTTTGCAATTTTCATCGGCTCCATTCTTTTG CCTCGGCCAGGCAGCGAGACCGGCATAGACCTGGACGCCAAGATTGTCCGGGCTTGCAAGGCAGGACTTGTTGCAGCGCT TGCTGAGGCGTTCGCCGCCGGCACGGTCTATGACCTCGGCCTATTGTTCTATGTGCTGGCGGGAACGATAGCAGTGGTGC CTCTGCGCGCTTCGCAAAGGGAGAGCACGCCTGAGACGCCAATCGACGAAGTAACAGGACTTACCCCTCTCGGCGGGAGT CGTTCGTGA
Upstream 100 bases:
>100_bases CGCCGGTCCATCATAAGAGGTAGCGGGCGGTGGAACGACTGCGCGCCGGGCGCATGCTAACCTCACTCGCACTGCGAAAA TGGTCGCGGGGGTGGCTGGC
Downstream 100 bases:
>100_bases AGCTCGTCGTCTTCAATGTCAAATACAGCCCAAATCTGGGTGACGGTGTTCTGGCCTCCTGCCTTGAGCGCGGGCTGAGG CAAGGCGGGCCCGACATCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MKIELIGLLTIALGMMTFLAPVHRAFSIMVLSTLFGAGAAFSLPGLGGASVLVPSLFLVFYGLRMFLAFGEGPILESLAP PRAGFWLLLLTAYAVASAFFLPRLMEDVTETMTVQRLAGGRSSISLIALEPSTNNITQAFYALGGLACFAFTFAYLRSAG SPARLVYAMLALSAANLGFAVLDVVTYYAGAAHIFDFVRTANYALLTGSEKAGFKRISGTFSEASAFAGYTSVLFAFIGS LWLDRVRSLLTGSVAVLLLAALLLSTSATGMVALAVVAVYLAFRSVGESIRKSPIGRPAFLASTVLAIPLVSLFVLLAMP DLLDSVASYLDEILFSKLESHSGRERFMWNAVAYQVFIDTGGWGAGLGSARASSYLLVLLSNVGLLGTALFAIFIGSILL PRPGSETGIDLDAKIVRACKAGLVAALAEAFAAGTVYDLGLLFYVLAGTIAVVPLRASQRESTPETPIDEVTGLTPLGGS RS
Sequences:
>Translated_482_residues MKIELIGLLTIALGMMTFLAPVHRAFSIMVLSTLFGAGAAFSLPGLGGASVLVPSLFLVFYGLRMFLAFGEGPILESLAP PRAGFWLLLLTAYAVASAFFLPRLMEDVTETMTVQRLAGGRSSISLIALEPSTNNITQAFYALGGLACFAFTFAYLRSAG SPARLVYAMLALSAANLGFAVLDVVTYYAGAAHIFDFVRTANYALLTGSEKAGFKRISGTFSEASAFAGYTSVLFAFIGS LWLDRVRSLLTGSVAVLLLAALLLSTSATGMVALAVVAVYLAFRSVGESIRKSPIGRPAFLASTVLAIPLVSLFVLLAMP DLLDSVASYLDEILFSKLESHSGRERFMWNAVAYQVFIDTGGWGAGLGSARASSYLLVLLSNVGLLGTALFAIFIGSILL PRPGSETGIDLDAKIVRACKAGLVAALAEAFAAGTVYDLGLLFYVLAGTIAVVPLRASQRESTPETPIDEVTGLTPLGGS RS >Mature_482_residues MKIELIGLLTIALGMMTFLAPVHRAFSIMVLSTLFGAGAAFSLPGLGGASVLVPSLFLVFYGLRMFLAFGEGPILESLAP PRAGFWLLLLTAYAVASAFFLPRLMEDVTETMTVQRLAGGRSSISLIALEPSTNNITQAFYALGGLACFAFTFAYLRSAG SPARLVYAMLALSAANLGFAVLDVVTYYAGAAHIFDFVRTANYALLTGSEKAGFKRISGTFSEASAFAGYTSVLFAFIGS LWLDRVRSLLTGSVAVLLLAALLLSTSATGMVALAVVAVYLAFRSVGESIRKSPIGRPAFLASTVLAIPLVSLFVLLAMP DLLDSVASYLDEILFSKLESHSGRERFMWNAVAYQVFIDTGGWGAGLGSARASSYLLVLLSNVGLLGTALFAIFIGSILL PRPGSETGIDLDAKIVRACKAGLVAALAEAFAAGTVYDLGLLFYVLAGTIAVVPLRASQRESTPETPIDEVTGLTPLGGS RS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50652; Mature: 50652
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIELIGLLTIALGMMTFLAPVHRAFSIMVLSTLFGAGAAFSLPGLGGASVLVPSLFLVF CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH YGLRMFLAFGEGPILESLAPPRAGFWLLLLTAYAVASAFFLPRLMEDVTETMTVQRLAGG HHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RSSISLIALEPSTNNITQAFYALGGLACFAFTFAYLRSAGSPARLVYAMLALSAANLGFA CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHH VLDVVTYYAGAAHIFDFVRTANYALLTGSEKAGFKRISGTFSEASAFAGYTSVLFAFIGS HHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LWLDRVRSLLTGSVAVLLLAALLLSTSATGMVALAVVAVYLAFRSVGESIRKSPIGRPAF HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LASTVLAIPLVSLFVLLAMPDLLDSVASYLDEILFSKLESHSGRERFMWNAVAYQVFIDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEEEC GGWGAGLGSARASSYLLVLLSNVGLLGTALFAIFIGSILLPRPGSETGIDLDAKIVRACK CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH AGLVAALAEAFAAGTVYDLGLLFYVLAGTIAVVPLRASQRESTPETPIDEVTGLTPLGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCC RS CC >Mature Secondary Structure MKIELIGLLTIALGMMTFLAPVHRAFSIMVLSTLFGAGAAFSLPGLGGASVLVPSLFLVF CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH YGLRMFLAFGEGPILESLAPPRAGFWLLLLTAYAVASAFFLPRLMEDVTETMTVQRLAGG HHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RSSISLIALEPSTNNITQAFYALGGLACFAFTFAYLRSAGSPARLVYAMLALSAANLGFA CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHH VLDVVTYYAGAAHIFDFVRTANYALLTGSEKAGFKRISGTFSEASAFAGYTSVLFAFIGS HHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LWLDRVRSLLTGSVAVLLLAALLLSTSATGMVALAVVAVYLAFRSVGESIRKSPIGRPAF HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LASTVLAIPLVSLFVLLAMPDLLDSVASYLDEILFSKLESHSGRERFMWNAVAYQVFIDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEEEC GGWGAGLGSARASSYLLVLLSNVGLLGTALFAIFIGSILLPRPGSETGIDLDAKIVRACK CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH AGLVAALAEAFAAGTVYDLGLLFYVLAGTIAVVPLRASQRESTPETPIDEVTGLTPLGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCC RS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA