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The map label for this gene is yliI [H]

Identifier: 110634893

GI number: 110634893

Start: 2740635

End: 2741771

Strand: Reverse

Name: yliI [H]

Synonym: Meso_2552

Alternate gene names: 110634893

Gene position: 2741771-2740635 (Counterclockwise)

Preceding gene: 110634896

Following gene: 110634891

Centisome position: 62.14

GC content: 61.92

Gene sequence:

>1137_bases
ATGTCATCGAAGATCATCCAGTCCCTGAGCATTTTCGCCGTCCCGCTGCTCGTCTCCTGCGCATGGGCTCAAGACGTGCG
TTCGAGCCTGGAAAGCGAGAGCGGCTCGCTTCGTGTGGAAACCGTTGCGGACGGGCTTTCCAGCCCGTGGGGAGCTGTCT
TCCTGCCCGACGGCTCCATGCTGGTGACGGAACGCAGCGGAACCTTGCGCAGGATCAGCGCCGAGGGGGAGATTTCGAGC
CCGATCCAGGGTACGCCGGAGGTCGTGGCCCGGGGACAGGGCGGGCTCCTGGATGTGGCGCTCGATCCGCAGTTCGACCA
GAACCGCCTGGTCTATTTTACCTTCTCCGAAGCGCGTGGCGAGGGGGCGGGAACTTCCGCTGGCCGAGGCCGGCTGAACG
AAGATGCTACGGCTATTGAGAATTTTGAGGTCATTTTCCGGCAGGAGCCGGCGGTTTCCGGCGGAAACCATTTCGGTTCA
CGCCTTGCCTTCTCGCCGGATGGGCACCTGTTTGTCACGATGGGCGACCGCTTCGACCACATGCAGGAAGCGCAGAACAT
ATCGAACCATTTGGGCAAGCTCGTTCGGATCAGTCCTGACGGCTCGATCCCGCAGGACAATCCATTCGTCGGACGCGATG
GGGCAGATGAGATATGGTCTTATGGCCACCGAAACGTTCAGGGCGCCGCGATTCATCCGGATACGGGCGAACTCTGGATC
GCGGAGCTTGGCCCTCGCGGCGGGGACGAGGTCAATATTCCGAAGTCCGGTGAGAATTATGGATGGCCGCTCGTCAGTCC
CGGTCGCCATTATTCAGGCGAACCGATTCCAGATCCATCGACGCGGCCGGAACTTGCGGGGGCAATCTACTCCTGGAATC
CGGTGATTTCGCCTTCCGGCATTGCTTTCGTCACGAGCGATGCCTTTCCGGATTGGCGGGGCGATCTGCTGCTCGCCGGA
CTTTCCTCACAGGCAATCGTGCGTCTCGATCTGGAAGGCCAAAGGGCCGTCGGCGAGGAGCGCTTCGATATGGGCGCGCG
CATCAGGGATGTCCTCTTCGGCCCCGACGGGCAGCTCTATGCGTTGACCGACGGCGAAGGCGGAGCGGTGATCCGGATCT
CGCGACAGGAAGGGTAG

Upstream 100 bases:

>100_bases
GGGACAGACGCTTGTTTTGTGCAGATTGCTCCTTACGATGGGAACCGCGCATCTCGCTCAAAGGTTCGCGTATCGACGCG
CCCAAGAGAGGACCTGCCTC

Downstream 100 bases:

>100_bases
GGAGCTTCAGATGCGGCGCTGCCGGCCCGCAATATTAGCCATAGCAGGGCAGCCTAGGCGGCCGTGATTTCTGGTCAGGG
CATTTCCGGGCTGTTGTCCG

Product: glucose sorbosone dehydrogenase

Products: NA

Alternate protein names: Asd [H]

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MSSKIIQSLSIFAVPLLVSCAWAQDVRSSLESESGSLRVETVADGLSSPWGAVFLPDGSMLVTERSGTLRRISAEGEISS
PIQGTPEVVARGQGGLLDVALDPQFDQNRLVYFTFSEARGEGAGTSAGRGRLNEDATAIENFEVIFRQEPAVSGGNHFGS
RLAFSPDGHLFVTMGDRFDHMQEAQNISNHLGKLVRISPDGSIPQDNPFVGRDGADEIWSYGHRNVQGAAIHPDTGELWI
AELGPRGGDEVNIPKSGENYGWPLVSPGRHYSGEPIPDPSTRPELAGAIYSWNPVISPSGIAFVTSDAFPDWRGDLLLAG
LSSQAIVRLDLEGQRAVGEERFDMGARIRDVLFGPDGQLYALTDGEGGAVIRISRQEG

Sequences:

>Translated_378_residues
MSSKIIQSLSIFAVPLLVSCAWAQDVRSSLESESGSLRVETVADGLSSPWGAVFLPDGSMLVTERSGTLRRISAEGEISS
PIQGTPEVVARGQGGLLDVALDPQFDQNRLVYFTFSEARGEGAGTSAGRGRLNEDATAIENFEVIFRQEPAVSGGNHFGS
RLAFSPDGHLFVTMGDRFDHMQEAQNISNHLGKLVRISPDGSIPQDNPFVGRDGADEIWSYGHRNVQGAAIHPDTGELWI
AELGPRGGDEVNIPKSGENYGWPLVSPGRHYSGEPIPDPSTRPELAGAIYSWNPVISPSGIAFVTSDAFPDWRGDLLLAG
LSSQAIVRLDLEGQRAVGEERFDMGARIRDVLFGPDGQLYALTDGEGGAVIRISRQEG
>Mature_377_residues
SSKIIQSLSIFAVPLLVSCAWAQDVRSSLESESGSLRVETVADGLSSPWGAVFLPDGSMLVTERSGTLRRISAEGEISSP
IQGTPEVVARGQGGLLDVALDPQFDQNRLVYFTFSEARGEGAGTSAGRGRLNEDATAIENFEVIFRQEPAVSGGNHFGSR
LAFSPDGHLFVTMGDRFDHMQEAQNISNHLGKLVRISPDGSIPQDNPFVGRDGADEIWSYGHRNVQGAAIHPDTGELWIA
ELGPRGGDEVNIPKSGENYGWPLVSPGRHYSGEPIPDPSTRPELAGAIYSWNPVISPSGIAFVTSDAFPDWRGDLLLAGL
SSQAIVRLDLEGQRAVGEERFDMGARIRDVLFGPDGQLYALTDGEGGAVIRISRQEG

Specific function: Aldose sugar dehydrogenase with broad substrate specificity. The physiological substrate is unknown. Can oxidize glucose to gluconolactone. Can also utilize D-arabinose, L- arabinose and 2-deoxy-glucose. Has higher activity towards oligomeric sugars, such

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Homo sapiens, GI187936953, Length=259, Percent_Identity=29.7297297297297, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI187936955, Length=259, Percent_Identity=29.7297297297297, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI124248546, Length=275, Percent_Identity=29.0909090909091, Blast_Score=80, Evalue=3e-15,
Organism=Escherichia coli, GI1787060, Length=373, Percent_Identity=43.1635388739946, Blast_Score=298, Evalue=4e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 40556; Mature: 40425

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKIIQSLSIFAVPLLVSCAWAQDVRSSLESESGSLRVETVADGLSSPWGAVFLPDGSM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEECCCCE
LVTERSGTLRRISAEGEISSPIQGTPEVVARGQGGLLDVALDPQFDQNRLVYFTFSEARG
EEEECCCCEEEEECCCCCCCCCCCCHHHEECCCCCEEEEEECCCCCCCEEEEEEECCCCC
EGAGTSAGRGRLNEDATAIENFEVIFRQEPAVSGGNHFGSRLAFSPDGHLFVTMGDRFDH
CCCCCCCCCCCCCCCHHHHCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEECCHHHH
MQEAQNISNHLGKLVRISPDGSIPQDNPFVGRDGADEIWSYGHRNVQGAAIHPDTGELWI
HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEECCCCCCEEE
AELGPRGGDEVNIPKSGENYGWPLVSPGRHYSGEPIPDPSTRPELAGAIYSWNPVISPSG
EECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCEEEECCCCCCCCC
IAFVTSDAFPDWRGDLLLAGLSSQAIVRLDLEGQRAVGEERFDMGARIRDVLFGPDGQLY
EEEEECCCCCCCCCCEEEEECCCCEEEEEECCCCHHCCHHHHHCCCCEEEEEECCCCCEE
ALTDGEGGAVIRISRQEG
EEECCCCCEEEEEECCCC
>Mature Secondary Structure 
SSKIIQSLSIFAVPLLVSCAWAQDVRSSLESESGSLRVETVADGLSSPWGAVFLPDGSM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEECCCCE
LVTERSGTLRRISAEGEISSPIQGTPEVVARGQGGLLDVALDPQFDQNRLVYFTFSEARG
EEEECCCCEEEEECCCCCCCCCCCCHHHEECCCCCEEEEEECCCCCCCEEEEEEECCCCC
EGAGTSAGRGRLNEDATAIENFEVIFRQEPAVSGGNHFGSRLAFSPDGHLFVTMGDRFDH
CCCCCCCCCCCCCCCHHHHCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEECCHHHH
MQEAQNISNHLGKLVRISPDGSIPQDNPFVGRDGADEIWSYGHRNVQGAAIHPDTGELWI
HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEECCCCCCEEE
AELGPRGGDEVNIPKSGENYGWPLVSPGRHYSGEPIPDPSTRPELAGAIYSWNPVISPSG
EECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCEEEECCCCCCCCC
IAFVTSDAFPDWRGDLLLAGLSSQAIVRLDLEGQRAVGEERFDMGARIRDVLFGPDGQLY
EEEEECCCCCCCCCCEEEEECCCCEEEEEECCCCHHCCHHHHHCCCCEEEEEECCCCCEE
ALTDGEGGAVIRISRQEG
EEECCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]