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The map label for this gene is rutF [H]

Identifier: 110634805

GI number: 110634805

Start: 2640895

End: 2641407

Strand: Reverse

Name: rutF [H]

Synonym: Meso_2464

Alternate gene names: 110634805

Gene position: 2641407-2640895 (Counterclockwise)

Preceding gene: 110634806

Following gene: 110634802

Centisome position: 59.86

GC content: 61.01

Gene sequence:

>513_bases
ATGGGAACCGCAGTCTCCAAGACCGAATTCCGCGATGCGATGGCTCGGGTCTGCGCTCCGGTCAACGTGATCACCACCAA
CGGACCCGCCGGGCGGGGCGGGTTCACCGCCACCGCGATGTGCTCGGTCACCGATGAGCCGCCCACGCTTCTGGTCTGCA
TGAACAGCCGCTCGGCCCAGGCAGGTCTCTTCATCGAGAACCGCCGCTTTTGCGTCAACGTGCTTACGCAGGAACACAAG
GACCTTGCCGGCTATTTCGCCGGGCAGCAAGCGGACATGGATGCCCGCTACGCTGCCGCGGAGTGGGTCAATTTGCTCTC
CGGCAATCTGGCGCTCAGTGACGCAATCGTCTCTTTCGACTGCCAATTGATCGACGCGCGTCCTGTCGGCACGCACAATA
TCTTCATGGGCCAGGTTGTCGAAATTCGCACCCGTAAGGATGGTCACGCCCTTCTCTATTTCGACCGCAATTTTGTGCAC
GTGCCTACCCAAACGGGCAGCTTCGGCGGGTAA

Upstream 100 bases:

>100_bases
ATGGCCGATTATGACGAAAACGGCTGGACCGGTGATACTTGGCTGCCGGCGCTTGACGACGCGTCCACGGTGCGGGACGC
GGCCGAGTGAGAACGCAGTG

Downstream 100 bases:

>100_bases
CGATTAATACCACCACGGATGACCGACCGGAGGCGCGATCGGTGAACTGGCTCACGGGATCGACTGCGATGAATAATCTC
TATCTTAAGCCTCGGTTTCG

Product: flavin reductase-like, FMN-binding

Products: NA

Alternate protein names: FMN reductase; NAD(P)H:flavin oxidoreductase [H]

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MGTAVSKTEFRDAMARVCAPVNVITTNGPAGRGGFTATAMCSVTDEPPTLLVCMNSRSAQAGLFIENRRFCVNVLTQEHK
DLAGYFAGQQADMDARYAAAEWVNLLSGNLALSDAIVSFDCQLIDARPVGTHNIFMGQVVEIRTRKDGHALLYFDRNFVH
VPTQTGSFGG

Sequences:

>Translated_170_residues
MGTAVSKTEFRDAMARVCAPVNVITTNGPAGRGGFTATAMCSVTDEPPTLLVCMNSRSAQAGLFIENRRFCVNVLTQEHK
DLAGYFAGQQADMDARYAAAEWVNLLSGNLALSDAIVSFDCQLIDARPVGTHNIFMGQVVEIRTRKDGHALLYFDRNFVH
VPTQTGSFGG
>Mature_169_residues
GTAVSKTEFRDAMARVCAPVNVITTNGPAGRGGFTATAMCSVTDEPPTLLVCMNSRSAQAGLFIENRRFCVNVLTQEHKD
LAGYFAGQQADMDARYAAAEWVNLLSGNLALSDAIVSFDCQLIDARPVGTHNIFMGQVVEIRTRKDGHALLYFDRNFVHV
PTQTGSFGG

Specific function: Catalyzes the reduction of FMN to FMNH2 which is used to reduce pyrimidine by RutA via the Rut pathway [H]

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the non-flavoprotein flavin reductase family. RutF subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081819, Length=154, Percent_Identity=45.4545454545455, Blast_Score=139, Evalue=8e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019917
- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: =1.5.1.29 [H]

Molecular weight: Translated: 18364; Mature: 18233

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTAVSKTEFRDAMARVCAPVNVITTNGPAGRGGFTATAMCSVTDEPPTLLVCMNSRSAQ
CCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCC
AGLFIENRRFCVNVLTQEHKDLAGYFAGQQADMDARYAAAEWVNLLSGNLALSDAIVSFD
CCEEEECCCCEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEECEEEEEE
CQLIDARPVGTHNIFMGQVVEIRTRKDGHALLYFDRNFVHVPTQTGSFGG
EEEEECCCCCCCCEEECEEEEEEECCCCCEEEEEECCEEECCCCCCCCCC
>Mature Secondary Structure 
GTAVSKTEFRDAMARVCAPVNVITTNGPAGRGGFTATAMCSVTDEPPTLLVCMNSRSAQ
CCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCC
AGLFIENRRFCVNVLTQEHKDLAGYFAGQQADMDARYAAAEWVNLLSGNLALSDAIVSFD
CCEEEECCCCEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEECEEEEEE
CQLIDARPVGTHNIFMGQVVEIRTRKDGHALLYFDRNFVHVPTQTGSFGG
EEEEECCCCCCCCEEECEEEEEEECCCCCEEEEEECCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA