| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634785
Identifier: 110634785
GI number: 110634785
Start: 2620335
End: 2621345
Strand: Direct
Name: 110634785
Synonym: Meso_2444
Alternate gene names: NA
Gene position: 2620335-2621345 (Clockwise)
Preceding gene: 110634784
Following gene: 110634786
Centisome position: 59.39
GC content: 63.3
Gene sequence:
>1011_bases GTGAAGGACTTCTGGATCTCGTCGGGTCATCATCTGCTCGATCGAGACGAGGCAGGCCGGCTGAGGGTGACGGACGCCTT TATCAAGGCTTATCTCGCACGGCCCGAGCTTCTCCCCCCCGATTCCGCCTGCGAAGCGGAATTGCGCCTGCATCACGACC TCCTGATGCATCATCCGCGCCGGCCGGTCGGGAAGGAGGAGATCGCCGCCATTGAAGATCCGGATGCGCGGGAAAACTGG GAATTCATGATCGCCTTCCGCGACCGTTTGCTGGCGGCGCCATCTCTCGAAGCCGTTTATCTGGAGCTGGCGCGCGGCGC GGCGGCAGGAATACCGCCTCTCTTCATGAATCAGCTTGCGCAGGTGGTGCTGCGCAATGCGCTCGACGGCGAGCGCGATC CTTTCGTCCTGCGCGCGGCCGAGCTGTTCTACCGTACGCAGCGGGTGACCTTTCATGAAGGAGCGCTACTGCTGGCCGAT ACGGAAACCGTGGAGGTGCATGAGCAGAACCGCCACGCCTCCCCTCTCCTGAACACGCTCGGCGGGCCAGCCGTCACCGA GCTCGAAATCCTCGAGCAGGAGAATGCCGACGGCTATTTCGAAAGGAGCGATGCCTTCGACCTGGTGCTGAATCTTGGTA GCGCCGACAGCCCCGCGCGGAAGGGGCTCGCCGCCGCAATGGAGGCGTGGATACGCCATCTGCTCGCCATCGAGGTGAGG ATAGAGCCGGTCGAGCGGATCGAGGACGACGACTGGGCCTGGTTCGTTGGCCTTGATGCGGAGGCCACGCGCATCGGCAA TGCATTGTGGACGGACAGAGAGCTTGATCCCGAGGCGACAGAGCGCATAATAGCATTGTTCCGGCTCAGCTTTTCCGACA TCGGCGTGGTCAGGCCAGATGTTGGCGCGCGGCCGGTCTGGCTGATCCTTGCCATGACGCCCGATCGGACAATCCGCATG AAGCCGCAGAACCTCATTGCCGGCCTGCCGCTTGGCGCAGCCGCGAGCTAG
Upstream 100 bases:
>100_bases GCCGGCTGGAGCCCGCCACCGCATTTCGTTTCGTCGAAGTCGAGGAAGAGGATCAGCCGGCGGAAGATATCGACATCCTG AGCCTGGGCGGGAGGCGCAA
Downstream 100 bases:
>100_bases GATACGTGACCATGGTACGGGAAACGGCCGAAGTCGGTGTTATCGTGGAGCGGCGGGCACAGAAAAGCCCCTGGGTGGAC CATGCCTGGGTCCCGGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MKDFWISSGHHLLDRDEAGRLRVTDAFIKAYLARPELLPPDSACEAELRLHHDLLMHHPRRPVGKEEIAAIEDPDARENW EFMIAFRDRLLAAPSLEAVYLELARGAAAGIPPLFMNQLAQVVLRNALDGERDPFVLRAAELFYRTQRVTFHEGALLLAD TETVEVHEQNRHASPLLNTLGGPAVTELEILEQENADGYFERSDAFDLVLNLGSADSPARKGLAAAMEAWIRHLLAIEVR IEPVERIEDDDWAWFVGLDAEATRIGNALWTDRELDPEATERIIALFRLSFSDIGVVRPDVGARPVWLILAMTPDRTIRM KPQNLIAGLPLGAAAS
Sequences:
>Translated_336_residues MKDFWISSGHHLLDRDEAGRLRVTDAFIKAYLARPELLPPDSACEAELRLHHDLLMHHPRRPVGKEEIAAIEDPDARENW EFMIAFRDRLLAAPSLEAVYLELARGAAAGIPPLFMNQLAQVVLRNALDGERDPFVLRAAELFYRTQRVTFHEGALLLAD TETVEVHEQNRHASPLLNTLGGPAVTELEILEQENADGYFERSDAFDLVLNLGSADSPARKGLAAAMEAWIRHLLAIEVR IEPVERIEDDDWAWFVGLDAEATRIGNALWTDRELDPEATERIIALFRLSFSDIGVVRPDVGARPVWLILAMTPDRTIRM KPQNLIAGLPLGAAAS >Mature_336_residues MKDFWISSGHHLLDRDEAGRLRVTDAFIKAYLARPELLPPDSACEAELRLHHDLLMHHPRRPVGKEEIAAIEDPDARENW EFMIAFRDRLLAAPSLEAVYLELARGAAAGIPPLFMNQLAQVVLRNALDGERDPFVLRAAELFYRTQRVTFHEGALLLAD TETVEVHEQNRHASPLLNTLGGPAVTELEILEQENADGYFERSDAFDLVLNLGSADSPARKGLAAAMEAWIRHLLAIEVR IEPVERIEDDDWAWFVGLDAEATRIGNALWTDRELDPEATERIIALFRLSFSDIGVVRPDVGARPVWLILAMTPDRTIRM KPQNLIAGLPLGAAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37606; Mature: 37606
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDFWISSGHHLLDRDEAGRLRVTDAFIKAYLARPELLPPDSACEAELRLHHDLLMHHPR CCCCCCCCCCCEECCCCCCCEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC RPVGKEEIAAIEDPDARENWEFMIAFRDRLLAAPSLEAVYLELARGAAAGIPPLFMNQLA CCCCHHHHHCCCCCCCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHH QVVLRNALDGERDPFVLRAAELFYRTQRVTFHEGALLLADTETVEVHEQNRHASPLLNTL HHHHHHHCCCCCCCHHHHHHHHHHHHHCEEEECCEEEEECCCEEEEECCCCCHHHHHHHC GGPAVTELEILEQENADGYFERSDAFDLVLNLGSADSPARKGLAAAMEAWIRHLLAIEVR CCCCEEHHHHHHCCCCCCCEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEEE IEPVERIEDDDWAWFVGLDAEATRIGNALWTDRELDPEATERIIALFRLSFSDIGVVRPD ECHHHHCCCCCEEEEEECCCHHHHHCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCEECCC VGARPVWLILAMTPDRTIRMKPQNLIAGLPLGAAAS CCCCCEEEEEEECCCCEEEECHHHHHCCCCCCCCCC >Mature Secondary Structure MKDFWISSGHHLLDRDEAGRLRVTDAFIKAYLARPELLPPDSACEAELRLHHDLLMHHPR CCCCCCCCCCCEECCCCCCCEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC RPVGKEEIAAIEDPDARENWEFMIAFRDRLLAAPSLEAVYLELARGAAAGIPPLFMNQLA CCCCHHHHHCCCCCCCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHH QVVLRNALDGERDPFVLRAAELFYRTQRVTFHEGALLLADTETVEVHEQNRHASPLLNTL HHHHHHHCCCCCCCHHHHHHHHHHHHHCEEEECCEEEEECCCEEEEECCCCCHHHHHHHC GGPAVTELEILEQENADGYFERSDAFDLVLNLGSADSPARKGLAAAMEAWIRHLLAIEVR CCCCEEHHHHHHCCCCCCCEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEEE IEPVERIEDDDWAWFVGLDAEATRIGNALWTDRELDPEATERIIALFRLSFSDIGVVRPD ECHHHHCCCCCEEEEEECCCHHHHHCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCEECCC VGARPVWLILAMTPDRTIRMKPQNLIAGLPLGAAAS CCCCCEEEEEEECCCCEEEECHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA