| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634694
Identifier: 110634694
GI number: 110634694
Start: 2500397
End: 2501380
Strand: Reverse
Name: 110634694
Synonym: Meso_2350
Alternate gene names: NA
Gene position: 2501380-2500397 (Counterclockwise)
Preceding gene: 110634695
Following gene: 110634693
Centisome position: 56.69
GC content: 57.93
Gene sequence:
>984_bases GTGGCGGTCCGAGTGAGCGCGGGGTCACGCATTCATATTGCCCTAGCTGATATGGGCTTTGCATCGCCCCGCGCATTCGG CGGTATTGGCTTCATGCTCGACAAGATAGCCGCCGACGTCGAACTAAGGTGCGCGCCAGTAGTATCGTTAGAGAGGGCGA GCAACCTTGACGAGCCATGCCAGTCTGAGTTGACGGCTCTCCTCGAAACGCTGGCCGAAGCGGGTAAAAGACCGGCTCAA GCTATCATCCATAGTCATGCGATCCAGCATATTGGTCTCGGCACAAAGACTGCCCTCAAGCTCGCGGTCATCTCAGCATA TCACCACCTATTTGAGCTTCCAGGCGGTCGGGCAGAGCAGCAAATCCTGAGCGGACGCGGTGGGGCGTCGGGCATCGGCA TTCATGGTTTCTTCCAGGGCGGCGTGTTGTGGGACGCGGGTAGACCCGCCGAGGAAATCGATCATCTGCTCCCCTCTGGC GCGAGACCGGCTACCTCTACACCGGTTCTGATGCTTCGGCTGCGTTTCCCAACTTCATGGAAGGTCGGCTTGTGCTTACC CAAGGCCGAATTATCACACGGCCCGGAGGAACAGCGCTTCTTCGAAGAGAATTCGCCCATCGCGCCCGGCGACGCGCTAG AAACAATGGCGTTGCTGTATCACGGAATCCTGCCTGCCTTTCGTCTTGAGAATCTGAAGTTGCTTGCGTCCTCGCTTGCT TCGATTTCCTGTAAGGGATTCAAGCGTCTCGAGATCGAGCGGTGCGGCGAGAATGTCGTCGAGCTATTGGGGGACCTTCA CGCAAAGGGCTATGCTGCGGGCATGAGCAGTATGGGTCCACTCGTATATGTAATTTTCGCCGCCAGTGATACGCGTGCCG CCGCCGAGTTGCGATCCCTTTGTGCCGCCCACAATGCACATTGGCTAGGATGTCATAGCGGTCTGAATCGCGGCGCAAGA GCTTCGCGGGACGAATTCGCATGA
Upstream 100 bases:
>100_bases CACCATCCTCGTGCGCCGAGGCGGTTTCATGTTCGACCATTTGGAGCGCCATTTTGAAGCGACATGGCAAGCAGCCAGGC CAGTAGTGCGGGAGTGAACA
Downstream 100 bases:
>100_bases GATTTCGATATGGCGACGTCTTCCGGTTCCAACGGCTGCTCAGGATTTTTTTCTACACCTCGAACGCCGACAAGCTGATC CAGGCTAGGCTGATCTTCAT
Product: beta-ribofuranosylaminobenzene 5'-phosphate synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MAVRVSAGSRIHIALADMGFASPRAFGGIGFMLDKIAADVELRCAPVVSLERASNLDEPCQSELTALLETLAEAGKRPAQ AIIHSHAIQHIGLGTKTALKLAVISAYHHLFELPGGRAEQQILSGRGGASGIGIHGFFQGGVLWDAGRPAEEIDHLLPSG ARPATSTPVLMLRLRFPTSWKVGLCLPKAELSHGPEEQRFFEENSPIAPGDALETMALLYHGILPAFRLENLKLLASSLA SISCKGFKRLEIERCGENVVELLGDLHAKGYAAGMSSMGPLVYVIFAASDTRAAAELRSLCAAHNAHWLGCHSGLNRGAR ASRDEFA
Sequences:
>Translated_327_residues MAVRVSAGSRIHIALADMGFASPRAFGGIGFMLDKIAADVELRCAPVVSLERASNLDEPCQSELTALLETLAEAGKRPAQ AIIHSHAIQHIGLGTKTALKLAVISAYHHLFELPGGRAEQQILSGRGGASGIGIHGFFQGGVLWDAGRPAEEIDHLLPSG ARPATSTPVLMLRLRFPTSWKVGLCLPKAELSHGPEEQRFFEENSPIAPGDALETMALLYHGILPAFRLENLKLLASSLA SISCKGFKRLEIERCGENVVELLGDLHAKGYAAGMSSMGPLVYVIFAASDTRAAAELRSLCAAHNAHWLGCHSGLNRGAR ASRDEFA >Mature_326_residues AVRVSAGSRIHIALADMGFASPRAFGGIGFMLDKIAADVELRCAPVVSLERASNLDEPCQSELTALLETLAEAGKRPAQA IIHSHAIQHIGLGTKTALKLAVISAYHHLFELPGGRAEQQILSGRGGASGIGIHGFFQGGVLWDAGRPAEEIDHLLPSGA RPATSTPVLMLRLRFPTSWKVGLCLPKAELSHGPEEQRFFEENSPIAPGDALETMALLYHGILPAFRLENLKLLASSLAS ISCKGFKRLEIERCGENVVELLGDLHAKGYAAGMSSMGPLVYVIFAASDTRAAAELRSLCAAHNAHWLGCHSGLNRGARA SRDEFA
Specific function: Unknown
COG id: COG1907
COG function: function code R; Predicted archaeal sugar kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1427 and M.thermoautotrophicum MTH830 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004422 - InterPro: IPR006204 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF00288 GHMP_kinases_N [H]
EC number: NA
Molecular weight: Translated: 34839; Mature: 34707
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVRVSAGSRIHIALADMGFASPRAFGGIGFMLDKIAADVELRCAPVVSLERASNLDEPC CEEEECCCCEEEEEEECCCCCCCCHHCHHHHHHHHHHHCCEEEECCCEEHHHHCCCCHHH QSELTALLETLAEAGKRPAQAIIHSHAIQHIGLGTKTALKLAVISAYHHLFELPGGRAEQ HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHH QILSGRGGASGIGIHGFFQGGVLWDAGRPAEEIDHLLPSGARPATSTPVLMLRLRFPTSW HHHHCCCCCCCCCEEEEECCCEEECCCCCHHHHHHHCCCCCCCCCCCCEEEEEEECCCCC KVGLCLPKAELSHGPEEQRFFEENSPIAPGDALETMALLYHGILPAFRLENLKLLASSLA EEEEECCHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SISCKGFKRLEIERCGENVVELLGDLHAKGYAAGMSSMGPLVYVIFAASDTRAAAELRSL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHH CAAHNAHWLGCHSGLNRGARASRDEFA HHHCCCCEEECHHHCCCCCCCCCCCCC >Mature Secondary Structure AVRVSAGSRIHIALADMGFASPRAFGGIGFMLDKIAADVELRCAPVVSLERASNLDEPC EEEECCCCEEEEEEECCCCCCCCHHCHHHHHHHHHHHCCEEEECCCEEHHHHCCCCHHH QSELTALLETLAEAGKRPAQAIIHSHAIQHIGLGTKTALKLAVISAYHHLFELPGGRAEQ HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHH QILSGRGGASGIGIHGFFQGGVLWDAGRPAEEIDHLLPSGARPATSTPVLMLRLRFPTSW HHHHCCCCCCCCCEEEEECCCEEECCCCCHHHHHHHCCCCCCCCCCCCEEEEEEECCCCC KVGLCLPKAELSHGPEEQRFFEENSPIAPGDALETMALLYHGILPAFRLENLKLLASSLA EEEEECCHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SISCKGFKRLEIERCGENVVELLGDLHAKGYAAGMSSMGPLVYVIFAASDTRAAAELRSL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHH CAAHNAHWLGCHSGLNRGARASRDEFA HHHCCCCEEECHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]