| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634646
Identifier: 110634646
GI number: 110634646
Start: 2454911
End: 2457157
Strand: Reverse
Name: 110634646
Synonym: Meso_2301
Alternate gene names: NA
Gene position: 2457157-2454911 (Counterclockwise)
Preceding gene: 110634647
Following gene: 110634643
Centisome position: 55.69
GC content: 57.01
Gene sequence:
>2247_bases ATGAAAACAGTTGAAATCCGCTCCGACATTACAGTGGTTGGAGGTGGGCTCGCCGGCATCTGCGCGGCCATAGCGGCGGC GAGACAGGGGCGAACCGTTGTCCTTGCACAGAATCGACCTGTTCTCGGTGGTAATTCCTCAAGCGAAATCCGTGTGCCTG TCGCCGGTGCTAATGGCATGTTCCACAACAGGTTTGCTCGCGAAACCGGCATCATCGGCGAATTGTTGGTGGAAAATCAG TATCGGAACCAGCCCGGTAACCCTGTCCTCTGGGACGCTCTGCTCCTGGAGTGGGTGCGCGCGGAGAGCAACATCAAGTT GCTGCTCAACACCGATGTCCGGACCTTCAAGACGAGGGTTACTGGCGACGGAATTGAGATCGTATCGGCAATCGGCTGGA CGCTCGGATCCGAAATAGAAGCCCGCCTCACCAGTAACTTCTTCATAGACTGTACGGGGGACGGCTTCGTCGGGGCGGCG ACCGGCGCCCAGTTCCGAGTCGGACGCGAAGCGCGGGCTGAAACGGGAGAAGCTTGGGCCCAGGAGAAAGCCGATAAGAA GTCGCTCGGCAGTACGATGTTCCTCTACACAAAGGATGCAGGACGCAGCATACCGTTCGTTCCGCCGAGTTTCGCCATTG ACATAACAAAGACAACGATCCCCCTTCACCGTATCGAATTCGCGAACGACTCCGGAGCGAAATACTGGTGGATCGAATAT GGTGGCCACATCGACACGATCCACGATAACGAGGCCATTCGCGACGAGTTGCTCGGCATCGTCTATGGCGTCTGGGACTA TATAAAGAACTCCGGGAAATACGACGCCGACACGCTCACCCTTGAGTGGATCAGCGCGATCCCCGGTAAGCGAGAGTCGC GCCGGCTCGTCGGCGACTATGTCCTCACTCAGACCGACGTGGTGAATCAGCGGTCCTTTCCAGATGCCGTTACGTTCGGA GGCTGGAGCGTCGATCTGCACCATCCCGATGGCGTGTATGCTACCGATGTGCCGGATCGCCACATGTTCGCGGACGGCGT TTTCGATATTCCGCTACGATGCCTCTACTCGGCCAATGTCGCCAACCTGCTGTTTGCTGGCCGTAATGTTTCCACTACCC ATGCTGGCAACGGAGCGATCCGGGTGATGGGTACCTGCGCAGCTATGGGAGAGGCAGCCGGCACGACTGCTGCCTTGTGC GTTGAGAAATCGGTGCATCCGCGCCTAATCGTCCGCGACAGCATCGGTCTCCTTCAGCAGCGCTTGCTCAAGGCGGATGC AACGATCATCGGAGTTAGGAATGAGGACGCCGACGACAAGGCGCAACGTGCAGAGGTCAGCGCTTCGTCCCATCTCGATT TCATCGAGACGATGGGAATAAGCAGGCCGGAGCCGCTTCTGCAAGATCTTGGTATTGTGCTACCTGTCGATCCCATCCTC GGACCGCTAGAGCTTCTCGTCGATGTCACGCAAGATACCGAGTTGGTTGCTGAGATCTGGGGCACCAGTGCCCCGCAGAA CTATGTCCCGGATCGACTGATACAGACGCACGCGGCTCGGCTGGAAAAGGGCGAAAATCAATGGTGTGGACTTCCACTTG ATTGGAACCCTAACACCCCCTGTAACGCTGTGTTGGTTGTTAGGCGCAACCCTGAAATTAACCTACATATGACCGCGGAT CCGGTCTTCGGTATCCAACTGTCCGAGCGCAAGACCGATCTACTGCCGAAATGGTATGCCAAGAACTGCGAGAAGAATTC ACCGCCCGGGGTCATCGAATGGTCGATCCGAGAGAGGAACCGCCAGTTGCCGCGTTTACGGACGCTCTTCGCTACAGAGG CTTACAAGCCGGAGAAGGTCGTGAATGGCCATGCTAGGCCCTTCGGCGGGCCCAATCTATGGCAATCTAGCCGGCCTGCG CGCGACCAATGGCTGAATCTCGCATGGCCGGAGCAGGTGGAAATCGCCGAGGTTTGGATCACGTTCAATGACGATGTGAA CGAGCGTCTGTACAATCTCCATCGTTACGAGACCCCGTTCCGAACAATTCCCGAGATCGTGCGAGACTATCGAATTCAAG TTCTCGAACGCGGTGAATGGCATACCTTGATCGCCGTCAGCGGAAACAGGCAAAGAAGAAGGAAGCATCGGTTTCCCAAA CCCGTGCTGTCAAGCAGCGTGCGGATTGTCATCGACGAGACTAATGGCAGCGAGTTCGCGCAGATCGTGGAAGTGCGGGT CTACTGA
Upstream 100 bases:
>100_bases ACAAGTTCCATCTCTTCGACACCAAGACCGGACTCGCGCTCAGCTCCTGAGATTGCATCTGAAAAAACGGTCCACAAAGT AACTTTCTAGAAGCGGCATC
Downstream 100 bases:
>100_bases GATTAGCCATTGCCCTATGTTGCGCTGATTCTAACACCACACGGCCGCGTGTCGTCGACCCGCTCAACAGGTTCAAAACC GAGGCCGGCGCCGACCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Coagulation Factor 5/8 Type Domain Protein; Pyridine Nucleotide-Disulfide Oxidoreductase; Glucose-Inhibited Division Protein A; Tat Pathway Signal Sequence; Protein Involved In Invasion; NADH-Dependant Oxidoreductase
Number of amino acids: Translated: 748; Mature: 748
Protein sequence:
>748_residues MKTVEIRSDITVVGGGLAGICAAIAAARQGRTVVLAQNRPVLGGNSSSEIRVPVAGANGMFHNRFARETGIIGELLVENQ YRNQPGNPVLWDALLLEWVRAESNIKLLLNTDVRTFKTRVTGDGIEIVSAIGWTLGSEIEARLTSNFFIDCTGDGFVGAA TGAQFRVGREARAETGEAWAQEKADKKSLGSTMFLYTKDAGRSIPFVPPSFAIDITKTTIPLHRIEFANDSGAKYWWIEY GGHIDTIHDNEAIRDELLGIVYGVWDYIKNSGKYDADTLTLEWISAIPGKRESRRLVGDYVLTQTDVVNQRSFPDAVTFG GWSVDLHHPDGVYATDVPDRHMFADGVFDIPLRCLYSANVANLLFAGRNVSTTHAGNGAIRVMGTCAAMGEAAGTTAALC VEKSVHPRLIVRDSIGLLQQRLLKADATIIGVRNEDADDKAQRAEVSASSHLDFIETMGISRPEPLLQDLGIVLPVDPIL GPLELLVDVTQDTELVAEIWGTSAPQNYVPDRLIQTHAARLEKGENQWCGLPLDWNPNTPCNAVLVVRRNPEINLHMTAD PVFGIQLSERKTDLLPKWYAKNCEKNSPPGVIEWSIRERNRQLPRLRTLFATEAYKPEKVVNGHARPFGGPNLWQSSRPA RDQWLNLAWPEQVEIAEVWITFNDDVNERLYNLHRYETPFRTIPEIVRDYRIQVLERGEWHTLIAVSGNRQRRRKHRFPK PVLSSSVRIVIDETNGSEFAQIVEVRVY
Sequences:
>Translated_748_residues MKTVEIRSDITVVGGGLAGICAAIAAARQGRTVVLAQNRPVLGGNSSSEIRVPVAGANGMFHNRFARETGIIGELLVENQ YRNQPGNPVLWDALLLEWVRAESNIKLLLNTDVRTFKTRVTGDGIEIVSAIGWTLGSEIEARLTSNFFIDCTGDGFVGAA TGAQFRVGREARAETGEAWAQEKADKKSLGSTMFLYTKDAGRSIPFVPPSFAIDITKTTIPLHRIEFANDSGAKYWWIEY GGHIDTIHDNEAIRDELLGIVYGVWDYIKNSGKYDADTLTLEWISAIPGKRESRRLVGDYVLTQTDVVNQRSFPDAVTFG GWSVDLHHPDGVYATDVPDRHMFADGVFDIPLRCLYSANVANLLFAGRNVSTTHAGNGAIRVMGTCAAMGEAAGTTAALC VEKSVHPRLIVRDSIGLLQQRLLKADATIIGVRNEDADDKAQRAEVSASSHLDFIETMGISRPEPLLQDLGIVLPVDPIL GPLELLVDVTQDTELVAEIWGTSAPQNYVPDRLIQTHAARLEKGENQWCGLPLDWNPNTPCNAVLVVRRNPEINLHMTAD PVFGIQLSERKTDLLPKWYAKNCEKNSPPGVIEWSIRERNRQLPRLRTLFATEAYKPEKVVNGHARPFGGPNLWQSSRPA RDQWLNLAWPEQVEIAEVWITFNDDVNERLYNLHRYETPFRTIPEIVRDYRIQVLERGEWHTLIAVSGNRQRRRKHRFPK PVLSSSVRIVIDETNGSEFAQIVEVRVY >Mature_748_residues MKTVEIRSDITVVGGGLAGICAAIAAARQGRTVVLAQNRPVLGGNSSSEIRVPVAGANGMFHNRFARETGIIGELLVENQ YRNQPGNPVLWDALLLEWVRAESNIKLLLNTDVRTFKTRVTGDGIEIVSAIGWTLGSEIEARLTSNFFIDCTGDGFVGAA TGAQFRVGREARAETGEAWAQEKADKKSLGSTMFLYTKDAGRSIPFVPPSFAIDITKTTIPLHRIEFANDSGAKYWWIEY GGHIDTIHDNEAIRDELLGIVYGVWDYIKNSGKYDADTLTLEWISAIPGKRESRRLVGDYVLTQTDVVNQRSFPDAVTFG GWSVDLHHPDGVYATDVPDRHMFADGVFDIPLRCLYSANVANLLFAGRNVSTTHAGNGAIRVMGTCAAMGEAAGTTAALC VEKSVHPRLIVRDSIGLLQQRLLKADATIIGVRNEDADDKAQRAEVSASSHLDFIETMGISRPEPLLQDLGIVLPVDPIL GPLELLVDVTQDTELVAEIWGTSAPQNYVPDRLIQTHAARLEKGENQWCGLPLDWNPNTPCNAVLVVRRNPEINLHMTAD PVFGIQLSERKTDLLPKWYAKNCEKNSPPGVIEWSIRERNRQLPRLRTLFATEAYKPEKVVNGHARPFGGPNLWQSSRPA RDQWLNLAWPEQVEIAEVWITFNDDVNERLYNLHRYETPFRTIPEIVRDYRIQVLERGEWHTLIAVSGNRQRRRKHRFPK PVLSSSVRIVIDETNGSEFAQIVEVRVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83333; Mature: 83333
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTVEIRSDITVVGGGLAGICAAIAAARQGRTVVLAQNRPVLGGNSSSEIRVPVAGANGM CCEEEEECCEEEECCCHHHHHHHHHHHCCCCEEEEECCCCEECCCCCCEEEEEEECCCCC FHNRFARETGIIGELLVENQYRNQPGNPVLWDALLLEWVRAESNIKLLLNTDVRTFKTRV HHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEE TGDGIEIVSAIGWTLGSEIEARLTSNFFIDCTGDGFVGAATGAQFRVGREARAETGEAWA CCCCHHHHHHHHHHHCCCHHEEECCCEEEEECCCCCEECCCCCEEEECCHHHHCCHHHHH QEKADKKSLGSTMFLYTKDAGRSIPFVPPSFAIDITKTTIPLHRIEFANDSGAKYWWIEY HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCCCCEEEEEEE GGHIDTIHDNEAIRDELLGIVYGVWDYIKNSGKYDADTLTLEWISAIPGKRESRRLVGDY CCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCCCCHHHHHHH VLTQTDVVNQRSFPDAVTFGGWSVDLHHPDGVYATDVPDRHMFADGVFDIPLRCLYSANV HEECHHHCCCCCCCCCEEECCEEEEEECCCCEEECCCCCCCEECCCCHHCCHHHHHCCCH ANLLFAGRNVSTTHAGNGAIRVMGTCAAMGEAAGTTAALCVEKSVHPRLIVRDSIGLLQQ HHHEEECCCCCEEECCCCEEEEEEEHHHHCCCCCCEEEEEEECCCCCEEEEECHHHHHHH RLLKADATIIGVRNEDADDKAQRAEVSASSHLDFIETMGISRPEPLLQDLGIVLPVDPIL HHHHCCCEEEEECCCCCCCHHHHHHCCHHCCCHHHHHCCCCCCCHHHHHCCCEEECCCCC GPLELLVDVTQDTELVAEIWGTSAPQNYVPDRLIQTHAARLEKGENQWCGLPLDWNPNTP CHHHHHEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCC CNAVLVVRRNPEINLHMTADPVFGIQLSERKTDLLPKWYAKNCEKNSPPGVIEWSIRERN CCEEEEEECCCCEEEEEECCCEEEEEECCCCHHCCCHHHHHCCCCCCCCCEEEEEEHHHC RQLPRLRTLFATEAYKPEKVVNGHARPFGGPNLWQSSRPARDQWLNLAWPEQVEIAEVWI CCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEEE TFNDDVNERLYNLHRYETPFRTIPEIVRDYRIQVLERGEWHTLIAVSGNRQRRRKHRFPK EECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCEEEEEEECCCHHHHHHHCCCC PVLSSSVRIVIDETNGSEFAQIVEVRVY HHHCCCEEEEEECCCCCCEEEEEEEEEC >Mature Secondary Structure MKTVEIRSDITVVGGGLAGICAAIAAARQGRTVVLAQNRPVLGGNSSSEIRVPVAGANGM CCEEEEECCEEEECCCHHHHHHHHHHHCCCCEEEEECCCCEECCCCCCEEEEEEECCCCC FHNRFARETGIIGELLVENQYRNQPGNPVLWDALLLEWVRAESNIKLLLNTDVRTFKTRV HHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEE TGDGIEIVSAIGWTLGSEIEARLTSNFFIDCTGDGFVGAATGAQFRVGREARAETGEAWA CCCCHHHHHHHHHHHCCCHHEEECCCEEEEECCCCCEECCCCCEEEECCHHHHCCHHHHH QEKADKKSLGSTMFLYTKDAGRSIPFVPPSFAIDITKTTIPLHRIEFANDSGAKYWWIEY HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCCCCEEEEEEE GGHIDTIHDNEAIRDELLGIVYGVWDYIKNSGKYDADTLTLEWISAIPGKRESRRLVGDY CCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCCCCHHHHHHH VLTQTDVVNQRSFPDAVTFGGWSVDLHHPDGVYATDVPDRHMFADGVFDIPLRCLYSANV HEECHHHCCCCCCCCCEEECCEEEEEECCCCEEECCCCCCCEECCCCHHCCHHHHHCCCH ANLLFAGRNVSTTHAGNGAIRVMGTCAAMGEAAGTTAALCVEKSVHPRLIVRDSIGLLQQ HHHEEECCCCCEEECCCCEEEEEEEHHHHCCCCCCEEEEEEECCCCCEEEEECHHHHHHH RLLKADATIIGVRNEDADDKAQRAEVSASSHLDFIETMGISRPEPLLQDLGIVLPVDPIL HHHHCCCEEEEECCCCCCCHHHHHHCCHHCCCHHHHHCCCCCCCHHHHHCCCEEECCCCC GPLELLVDVTQDTELVAEIWGTSAPQNYVPDRLIQTHAARLEKGENQWCGLPLDWNPNTP CHHHHHEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCC CNAVLVVRRNPEINLHMTADPVFGIQLSERKTDLLPKWYAKNCEKNSPPGVIEWSIRERN CCEEEEEECCCCEEEEEECCCEEEEEECCCCHHCCCHHHHHCCCCCCCCCEEEEEEHHHC RQLPRLRTLFATEAYKPEKVVNGHARPFGGPNLWQSSRPARDQWLNLAWPEQVEIAEVWI CCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEEE TFNDDVNERLYNLHRYETPFRTIPEIVRDYRIQVLERGEWHTLIAVSGNRQRRRKHRFPK EECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCEEEEEEECCCHHHHHHHCCCC PVLSSSVRIVIDETNGSEFAQIVEVRVY HHHCCCEEEEEECCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA