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The map label for this gene is yvdB [H]

Identifier: 110634604

GI number: 110634604

Start: 2411220

End: 2412938

Strand: Reverse

Name: yvdB [H]

Synonym: Meso_2257

Alternate gene names: 110634604

Gene position: 2412938-2411220 (Counterclockwise)

Preceding gene: 110634605

Following gene: 110634594

Centisome position: 54.68

GC content: 65.74

Gene sequence:

>1719_bases
ATGACAGCTGATATCATTACCGTTCCCCCCAAGCCCGCCCCGAGCTTTTCCGAGCTTTTCACCCCGAAACTCGTCACTGT
CCTGCGCGAGGGCTATTCCCTCGCCAGCTTCCGAGCCGATGCGGTAGCCGGCCTCACCGTAGCCATTGTGGCGCTGCCGC
TGTCCATGGCGATCGCCATCGCCTCGGGCGCCACACCCGCGCAGGGGCTCTATACGGCGATCGTGGGCGGCTTCCTCGTT
TCGGCTCTGGGCGGCAGCCGATTTCAGATCGGCGGACCGGCGGGCGCCTTTATCGTGCTGGTGGCGGCGACCGTGCAGGC
GCACGGAATGGACGGGCTCATTCTCGCTGTCATCCTGTCAGGCCTGATGCTCATGGCGGTCGGCTTCCTGCGGCTCGGCA
CCTATGTCAAATTCATTCCCTATCCGGTGACCGTCGGCTTCACGGCAGGCATCGCAGTCATCATCTTCGCCAGCCAGATC
AGGGACATTCTGGGCCTGCGGCTCGGCGGGGCGGAGCCGGGACCGCTCATCGAGAAACTGCCGGTGCTGTGGTCCGGCCT
TCCGACCGCAAATCCCGCCACCGTCTTTCTGGCCGGCGCGACCATCGCCCTCATCATCGGCTTCAAGCGGCTGCAACCGC
GCTTGCCCGGGATGCTGATCGCCGTGGCGGTGACGGGGCTGGCAACAGTTGGTCTCGGGCTGCCGGTGGCGACCATCGGC
ACGGCTTTCGGCGGTATCCCTTCCGGCTTACCCATTCCAGCGCTGCCCGCCTTCGATCTTGAGAAGGTGCAGACGGTGCT
GCCGAGCGCCGTCGCCTTCGCGCTGCTCGGCTCCATCGAATCGCTTCTTTCGGCAGTGGTGGCCGACGGGATGACGGGGC
GCCGCCACCGCTCCAATTGCGAACTGGTGGCGCAGGGGGTTGCCAACGTCGCCTCCGGCCTGTTCGGCGGCATCTGTGTG
ACCGGCACCATCGCCCGTACCGCCACCAATGTGCGCGCTGGCGCCCACGGGCCAGTCGCCGGCATGCTGCACGCGGTCTT
TCTCCTGCTCTTCGTGCTCGCCGCCGCGCCGCTGGCACGCTACATTCCCCTGGCGAGCCTAGCCGGTGTCCTGGCCGTGG
TGGCCTGGAACATGGTCGAGAAGCACGCCGTCTTGACTCTCCTGCGCGCCTCGCGCGGCGATGCGGCGGTGCTGATCGTC
ACCTTCGCCCTGACGATCTTCCGCGACCTGACGGAGGCGATTGTTGTCGGCTTTGCGCTGGGCTCCATCCTCTTCATCCA
CCGCATGTCGAGGATGACCGCCATCGAGATGCGTCTTCCTTTTGTCGTAGAGGATAGGGCCGACGAAGCCGATGGCGGCC
GCGCGCCCTATGACGAGGCGGCGGGCAGTGACCCCGATGTGGTCATCTATCGCATCTCGGGAGCCTTCTTCTTCGGTGCC
GCCGCCTCTATCGGTTCCGTGCTCGACCGGATCGCCGACTCCTACCGGGCGCTGGTGATCGACTTTTCGGCAGTGCCCTT
CTTGGATTCAACGGCCGCCAACACGATCGAGGGGCTCGCCCACAAGGCAGTGCGCCGCGACGTGAAGGTCTATCTGACCG
GCACTTCGCACGAAATGCGCAAGGATCTGTTCGCCCAGGGTGTCAAGCCGCCGCTGGTCCACTATGCGGGCAGCATCGAG
GATGCCGTGAAGAAGGCGCGGGGCAAGCATGGAGGCTGA

Upstream 100 bases:

>100_bases
CAAGGAGAGTTCACAGAGGTAAACCGACCCCGTTCAGCGACGGCGACCGCCGACTCCGAGCCGACGATCCCGCCGCCTTT
CATCAAGGCAGCCGGACATC

Downstream 100 bases:

>100_bases
ATCACCCATACACCGCGTCTCATCCGCCCGGCATTTTCTTGCAGAAAGGGCGGTCCTCGTCGACGAGGATGCGCGCGGCC
GCGCCGTCCAGGTCTTCATA

Product: sulphate transporter

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 572; Mature: 571

Protein sequence:

>572_residues
MTADIITVPPKPAPSFSELFTPKLVTVLREGYSLASFRADAVAGLTVAIVALPLSMAIAIASGATPAQGLYTAIVGGFLV
SALGGSRFQIGGPAGAFIVLVAATVQAHGMDGLILAVILSGLMLMAVGFLRLGTYVKFIPYPVTVGFTAGIAVIIFASQI
RDILGLRLGGAEPGPLIEKLPVLWSGLPTANPATVFLAGATIALIIGFKRLQPRLPGMLIAVAVTGLATVGLGLPVATIG
TAFGGIPSGLPIPALPAFDLEKVQTVLPSAVAFALLGSIESLLSAVVADGMTGRRHRSNCELVAQGVANVASGLFGGICV
TGTIARTATNVRAGAHGPVAGMLHAVFLLLFVLAAAPLARYIPLASLAGVLAVVAWNMVEKHAVLTLLRASRGDAAVLIV
TFALTIFRDLTEAIVVGFALGSILFIHRMSRMTAIEMRLPFVVEDRADEADGGRAPYDEAAGSDPDVVIYRISGAFFFGA
AASIGSVLDRIADSYRALVIDFSAVPFLDSTAANTIEGLAHKAVRRDVKVYLTGTSHEMRKDLFAQGVKPPLVHYAGSIE
DAVKKARGKHGG

Sequences:

>Translated_572_residues
MTADIITVPPKPAPSFSELFTPKLVTVLREGYSLASFRADAVAGLTVAIVALPLSMAIAIASGATPAQGLYTAIVGGFLV
SALGGSRFQIGGPAGAFIVLVAATVQAHGMDGLILAVILSGLMLMAVGFLRLGTYVKFIPYPVTVGFTAGIAVIIFASQI
RDILGLRLGGAEPGPLIEKLPVLWSGLPTANPATVFLAGATIALIIGFKRLQPRLPGMLIAVAVTGLATVGLGLPVATIG
TAFGGIPSGLPIPALPAFDLEKVQTVLPSAVAFALLGSIESLLSAVVADGMTGRRHRSNCELVAQGVANVASGLFGGICV
TGTIARTATNVRAGAHGPVAGMLHAVFLLLFVLAAAPLARYIPLASLAGVLAVVAWNMVEKHAVLTLLRASRGDAAVLIV
TFALTIFRDLTEAIVVGFALGSILFIHRMSRMTAIEMRLPFVVEDRADEADGGRAPYDEAAGSDPDVVIYRISGAFFFGA
AASIGSVLDRIADSYRALVIDFSAVPFLDSTAANTIEGLAHKAVRRDVKVYLTGTSHEMRKDLFAQGVKPPLVHYAGSIE
DAVKKARGKHGG
>Mature_571_residues
TADIITVPPKPAPSFSELFTPKLVTVLREGYSLASFRADAVAGLTVAIVALPLSMAIAIASGATPAQGLYTAIVGGFLVS
ALGGSRFQIGGPAGAFIVLVAATVQAHGMDGLILAVILSGLMLMAVGFLRLGTYVKFIPYPVTVGFTAGIAVIIFASQIR
DILGLRLGGAEPGPLIEKLPVLWSGLPTANPATVFLAGATIALIIGFKRLQPRLPGMLIAVAVTGLATVGLGLPVATIGT
AFGGIPSGLPIPALPAFDLEKVQTVLPSAVAFALLGSIESLLSAVVADGMTGRRHRSNCELVAQGVANVASGLFGGICVT
GTIARTATNVRAGAHGPVAGMLHAVFLLLFVLAAAPLARYIPLASLAGVLAVVAWNMVEKHAVLTLLRASRGDAAVLIVT
FALTIFRDLTEAIVVGFALGSILFIHRMSRMTAIEMRLPFVVEDRADEADGGRAPYDEAAGSDPDVVIYRISGAFFFGAA
ASIGSVLDRIADSYRALVIDFSAVPFLDSTAANTIEGLAHKAVRRDVKVYLTGTSHEMRKDLFAQGVKPPLVHYAGSIED
AVKKARGKHGG

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI94721259, Length=478, Percent_Identity=26.5690376569038, Blast_Score=109, Evalue=8e-24,
Organism=Homo sapiens, GI94721253, Length=478, Percent_Identity=26.5690376569038, Blast_Score=109, Evalue=9e-24,
Organism=Homo sapiens, GI94721255, Length=478, Percent_Identity=26.5690376569038, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI94721257, Length=478, Percent_Identity=26.5690376569038, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI262206105, Length=136, Percent_Identity=41.1764705882353, Blast_Score=88, Evalue=3e-17,
Organism=Homo sapiens, GI262206075, Length=136, Percent_Identity=41.1764705882353, Blast_Score=88, Evalue=3e-17,
Organism=Homo sapiens, GI262206069, Length=136, Percent_Identity=41.1764705882353, Blast_Score=88, Evalue=3e-17,
Organism=Homo sapiens, GI262206063, Length=136, Percent_Identity=41.1764705882353, Blast_Score=88, Evalue=3e-17,
Organism=Homo sapiens, GI45827800, Length=521, Percent_Identity=22.2648752399232, Blast_Score=87, Evalue=6e-17,
Organism=Homo sapiens, GI39752683, Length=521, Percent_Identity=22.2648752399232, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI45827802, Length=458, Percent_Identity=22.707423580786, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI4557535, Length=416, Percent_Identity=23.7980769230769, Blast_Score=76, Evalue=8e-14,
Organism=Homo sapiens, GI269784651, Length=392, Percent_Identity=23.2142857142857, Blast_Score=74, Evalue=6e-13,
Organism=Homo sapiens, GI100913030, Length=386, Percent_Identity=25.1295336787565, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI20336282, Length=453, Percent_Identity=21.8543046357616, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI16306483, Length=453, Percent_Identity=21.8543046357616, Blast_Score=70, Evalue=4e-12,
Organism=Escherichia coli, GI87081859, Length=546, Percent_Identity=36.8131868131868, Blast_Score=298, Evalue=5e-82,
Organism=Caenorhabditis elegans, GI17551690, Length=423, Percent_Identity=23.4042553191489, Blast_Score=108, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI86564196, Length=544, Percent_Identity=22.4264705882353, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17566848, Length=551, Percent_Identity=21.2341197822142, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI86564876, Length=618, Percent_Identity=22.9773462783171, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI86565215, Length=587, Percent_Identity=22.1465076660988, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17562578, Length=458, Percent_Identity=24.235807860262, Blast_Score=73, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6323121, Length=448, Percent_Identity=25, Blast_Score=77, Evalue=9e-15,
Organism=Drosophila melanogaster, GI85815873, Length=429, Percent_Identity=26.5734265734266, Blast_Score=119, Evalue=8e-27,
Organism=Drosophila melanogaster, GI24651449, Length=544, Percent_Identity=22.6102941176471, Blast_Score=104, Evalue=2e-22,
Organism=Drosophila melanogaster, GI19922482, Length=422, Percent_Identity=23.4597156398104, Blast_Score=101, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24647160, Length=427, Percent_Identity=24.3559718969555, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI21355087, Length=427, Percent_Identity=24.3559718969555, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24649801, Length=432, Percent_Identity=23.8425925925926, Blast_Score=99, Evalue=9e-21,
Organism=Drosophila melanogaster, GI24663084, Length=455, Percent_Identity=27.2527472527473, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI21357695, Length=455, Percent_Identity=27.2527472527473, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI21358229, Length=432, Percent_Identity=26.1574074074074, Blast_Score=90, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24666186, Length=412, Percent_Identity=25.9708737864078, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI21358633, Length=397, Percent_Identity=22.9219143576826, Blast_Score=77, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 59053; Mature: 58922

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTADIITVPPKPAPSFSELFTPKLVTVLREGYSLASFRADAVAGLTVAIVALPLSMAIAI
CCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASGATPAQGLYTAIVGGFLVSALGGSRFQIGGPAGAFIVLVAATVQAHGMDGLILAVILS
HCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
GLMLMAVGFLRLGTYVKFIPYPVTVGFTAGIAVIIFASQIRDILGLRLGGAEPGPLIEKL
HHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
PVLWSGLPTANPATVFLAGATIALIIGFKRLQPRLPGMLIAVAVTGLATVGLGLPVATIG
HHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHH
TAFGGIPSGLPIPALPAFDLEKVQTVLPSAVAFALLGSIESLLSAVVADGMTGRRHRSNC
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
ELVAQGVANVASGLFGGICVTGTIARTATNVRAGAHGPVAGMLHAVFLLLFVLAAAPLAR
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YIPLASLAGVLAVVAWNMVEKHAVLTLLRASRGDAAVLIVTFALTIFRDLTEAIVVGFAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GSILFIHRMSRMTAIEMRLPFVVEDRADEADGGRAPYDEAAGSDPDVVIYRISGAFFFGA
HHHHHHHHHHHHHHHHEECCEEEECCCCCCCCCCCCCHHCCCCCCCEEEEEECCHHHHHH
AASIGSVLDRIADSYRALVIDFSAVPFLDSTAANTIEGLAHKAVRRDVKVYLTGTSHEMR
HHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHH
KDLFAQGVKPPLVHYAGSIEDAVKKARGKHGG
HHHHHCCCCCCHHHHCCCHHHHHHHHCCCCCC
>Mature Secondary Structure 
TADIITVPPKPAPSFSELFTPKLVTVLREGYSLASFRADAVAGLTVAIVALPLSMAIAI
CCCEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASGATPAQGLYTAIVGGFLVSALGGSRFQIGGPAGAFIVLVAATVQAHGMDGLILAVILS
HCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
GLMLMAVGFLRLGTYVKFIPYPVTVGFTAGIAVIIFASQIRDILGLRLGGAEPGPLIEKL
HHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
PVLWSGLPTANPATVFLAGATIALIIGFKRLQPRLPGMLIAVAVTGLATVGLGLPVATIG
HHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHH
TAFGGIPSGLPIPALPAFDLEKVQTVLPSAVAFALLGSIESLLSAVVADGMTGRRHRSNC
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
ELVAQGVANVASGLFGGICVTGTIARTATNVRAGAHGPVAGMLHAVFLLLFVLAAAPLAR
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YIPLASLAGVLAVVAWNMVEKHAVLTLLRASRGDAAVLIVTFALTIFRDLTEAIVVGFAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GSILFIHRMSRMTAIEMRLPFVVEDRADEADGGRAPYDEAAGSDPDVVIYRISGAFFFGA
HHHHHHHHHHHHHHHHEECCEEEECCCCCCCCCCCCCHHCCCCCCCEEEEEECCHHHHHH
AASIGSVLDRIADSYRALVIDFSAVPFLDSTAANTIEGLAHKAVRRDVKVYLTGTSHEMR
HHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHH
KDLFAQGVKPPLVHYAGSIEDAVKKARGKHGG
HHHHHCCCCCCHHHHCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]