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The map label for this gene is nirK [H]

Identifier: 110634591

GI number: 110634591

Start: 2397215

End: 2398318

Strand: Direct

Name: nirK [H]

Synonym: Meso_2243

Alternate gene names: 110634591

Gene position: 2397215-2398318 (Clockwise)

Preceding gene: 110634586

Following gene: 110634593

Centisome position: 54.33

GC content: 64.49

Gene sequence:

>1104_bases
ATGTTCACGCGTCGCGAAGCACTGCTGGGCGTTGCCACAGCCGCCATGCTGAGCGCTCTGCCCTTCATGGCCTTCCCCGC
GCTGGCGGACGAAGCCGACGCCCTGCCGCGCCAGACTGTCGCGCTGGTCCCGCCGCCCTTCGTGCATGATCACGAGCAGG
TGGCGACCGGCGGGCCGAAGGTCGTAAAGTTCACCATGACCATCCAGGAGAAGGAGATCGTCATCGACGAGGACGGCACG
ACCTTCCAGGCCATGACCTTCGACGGCTCGGTTCCCGGGCCGATGATGGTGGTGCATGAGGGTGACTATGTGGAGCTGAC
GCTAGTCAACCCTGAGACCAACGGCCTCGCCCACAATATCGATTTCCATGCCGCGACCGGCGCCATGGGCGGCGGCGAGC
TGACGCTGATCAATCCCGGCGAACAGACCACCTTGCGCTTCAAGGCCACCCGCGCGGGCGTCTTCGTCTATCACTGCGCG
CCGGGCGGGCCGATGACACCCTGGCACGTTGTCTCGGGCATGAGCGGCGCGATCATGGTACTGCCGCGCGAGGGGCTGAA
GGACGATAAGGGCGAACCAGTCCGCTACGACCGCATCTACTATATCGGCGAGAACGACTTCTATGTTCCCCGTGACGAGA
ATGGCACGTTCAAGACCTACGATTCGGCAGGCGAGGCATATGCCGACACGGTGGAGATGATGCGCGGGCTGGTACCGACG
CACGTCGTCTTCAACGGAGCAAAGGGCGCGCTGACGGGCGACAACGCCCTGACCGCCAAGGTCGGCGAGACGGTCATGAT
CGTCCACGCGCAGGCGAACCGGGACACTCGGCCCCACCTGATCGGCGGCCATGGCGACCACGTCTGGGAAGAGGGCAAGT
TCGCCAATCCGCCTGCCAGGGATCTCGAGACCTGGTTCATCCGCGGCGGCTCGGCGGGTGCGGCGACCTACACCTTCCTG
AAGCCCGGCCTCTATGCCTATGTCAATCACAACCTCATCGAGGCGATCGAACTGGGAGCGGCCGCGCACATCATGGTGGA
GGGAGAGTGGAACGACGACCTGATGAAGCAGGTCGACGCGCCGCGACCGATCGCATCCTACTGA

Upstream 100 bases:

>100_bases
GGAAATGGCAGTCAAGGTATTTGCGCCAGAGCAAAGAACTTCGGCCGGTCTGCCTGTAGCGTTTTCTTCATCGACAACCA
GACACTACAAGGAGACCGAA

Downstream 100 bases:

>100_bases
GCGGGCGAGCTTACAAGACCAAGGCCCGGCGCATCGCGTCGGGCCTTTCCGATTCAGGCAGGCTGAAGCCGCCGTGTGAG
GAGTGCCGGGCCGTAGAGGA

Product: nitrite reductase, copper-containing

Products: NA

Alternate protein names: Cu-NIR [H]

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MFTRREALLGVATAAMLSALPFMAFPALADEADALPRQTVALVPPPFVHDHEQVATGGPKVVKFTMTIQEKEIVIDEDGT
TFQAMTFDGSVPGPMMVVHEGDYVELTLVNPETNGLAHNIDFHAATGAMGGGELTLINPGEQTTLRFKATRAGVFVYHCA
PGGPMTPWHVVSGMSGAIMVLPREGLKDDKGEPVRYDRIYYIGENDFYVPRDENGTFKTYDSAGEAYADTVEMMRGLVPT
HVVFNGAKGALTGDNALTAKVGETVMIVHAQANRDTRPHLIGGHGDHVWEEGKFANPPARDLETWFIRGGSAGAATYTFL
KPGLYAYVNHNLIEAIELGAAAHIMVEGEWNDDLMKQVDAPRPIASY

Sequences:

>Translated_367_residues
MFTRREALLGVATAAMLSALPFMAFPALADEADALPRQTVALVPPPFVHDHEQVATGGPKVVKFTMTIQEKEIVIDEDGT
TFQAMTFDGSVPGPMMVVHEGDYVELTLVNPETNGLAHNIDFHAATGAMGGGELTLINPGEQTTLRFKATRAGVFVYHCA
PGGPMTPWHVVSGMSGAIMVLPREGLKDDKGEPVRYDRIYYIGENDFYVPRDENGTFKTYDSAGEAYADTVEMMRGLVPT
HVVFNGAKGALTGDNALTAKVGETVMIVHAQANRDTRPHLIGGHGDHVWEEGKFANPPARDLETWFIRGGSAGAATYTFL
KPGLYAYVNHNLIEAIELGAAAHIMVEGEWNDDLMKQVDAPRPIASY
>Mature_367_residues
MFTRREALLGVATAAMLSALPFMAFPALADEADALPRQTVALVPPPFVHDHEQVATGGPKVVKFTMTIQEKEIVIDEDGT
TFQAMTFDGSVPGPMMVVHEGDYVELTLVNPETNGLAHNIDFHAATGAMGGGELTLINPGEQTTLRFKATRAGVFVYHCA
PGGPMTPWHVVSGMSGAIMVLPREGLKDDKGEPVRYDRIYYIGENDFYVPRDENGTFKTYDSAGEAYADTVEMMRGLVPT
HVVFNGAKGALTGDNALTAKVGETVMIVHAQANRDTRPHLIGGHGDHVWEEGKFANPPARDLETWFIRGGSAGAATYTFL
KPGLYAYVNHNLIEAIELGAAAHIMVEGEWNDDLMKQVDAPRPIASY

Specific function: Unknown

COG id: COG2132

COG function: function code Q; Putative multicopper oxidases

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 plastocyanin-like domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001117
- InterPro:   IPR011707
- InterPro:   IPR008972
- InterPro:   IPR001287
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00394 Cu-oxidase; PF07732 Cu-oxidase_3 [H]

EC number: =1.7.2.1 [H]

Molecular weight: Translated: 39744; Mature: 39744

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTRREALLGVATAAMLSALPFMAFPALADEADALPRQTVALVPPPFVHDHEQVATGGPK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEECCCCCCCCCHHHHCCCCE
VVKFTMTIQEKEIVIDEDGTTFQAMTFDGSVPGPMMVVHEGDYVELTLVNPETNGLAHNI
EEEEEEEEEEEEEEEECCCCEEEEEEECCCCCCCEEEEECCCEEEEEEECCCCCCEEEEC
DFHAATGAMGGGELTLINPGEQTTLRFKATRAGVFVYHCAPGGPMTPWHVVSGMSGAIMV
EEEEECCCCCCCEEEEECCCCCEEEEEEEEECCEEEEEECCCCCCCHHHHHCCCCCEEEE
LPREGLKDDKGEPVRYDRIYYIGENDFYVPRDENGTFKTYDSAGEAYADTVEMMRGLVPT
EECCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCEEEECCCCHHHHHHHHHHHCCCCE
HVVFNGAKGALTGDNALTAKVGETVMIVHAQANRDTRPHLIGGHGDHVWEEGKFANPPAR
EEEEECCCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCC
DLETWFIRGGSAGAATYTFLKPGLYAYVNHNLIEAIELGAAAHIMVEGEWNDDLMKQVDA
CCEEEEEECCCCCCEEEEEECCCEEEEECCCHHHHHHCCCEEEEEEECCCCHHHHHHCCC
PRPIASY
CCCCCCC
>Mature Secondary Structure
MFTRREALLGVATAAMLSALPFMAFPALADEADALPRQTVALVPPPFVHDHEQVATGGPK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEECCCCCCCCCHHHHCCCCE
VVKFTMTIQEKEIVIDEDGTTFQAMTFDGSVPGPMMVVHEGDYVELTLVNPETNGLAHNI
EEEEEEEEEEEEEEEECCCCEEEEEEECCCCCCCEEEEECCCEEEEEEECCCCCCEEEEC
DFHAATGAMGGGELTLINPGEQTTLRFKATRAGVFVYHCAPGGPMTPWHVVSGMSGAIMV
EEEEECCCCCCCEEEEECCCCCEEEEEEEEECCEEEEEECCCCCCCHHHHHCCCCCEEEE
LPREGLKDDKGEPVRYDRIYYIGENDFYVPRDENGTFKTYDSAGEAYADTVEMMRGLVPT
EECCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCEEEECCCCHHHHHHHHHHHCCCCE
HVVFNGAKGALTGDNALTAKVGETVMIVHAQANRDTRPHLIGGHGDHVWEEGKFANPPAR
EEEEECCCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCC
DLETWFIRGGSAGAATYTFLKPGLYAYVNHNLIEAIELGAAAHIMVEGEWNDDLMKQVDA
CCEEEEEECCCCCCEEEEEECCCEEEEECCCHHHHHHCCCEEEEEEECCCCHHHHHHCCC
PRPIASY
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]