Click here to switch to the map view.

The map label for this gene is yfcC [C]

Identifier: 110634590

GI number: 110634590

Start: 2395523

End: 2396959

Strand: Reverse

Name: yfcC [C]

Synonym: Meso_2242

Alternate gene names: 110634590

Gene position: 2396959-2395523 (Counterclockwise)

Preceding gene: 110634592

Following gene: 110634589

Centisome position: 54.32

GC content: 63.54

Gene sequence:

>1437_bases
ATGGCCATCGCCAGCGACGCAACCGAGCCGCGGAGGCTCCCTTTTCCGTCGGCCTTCACCATTCTGTTCGGCCTTATCAT
CCTCGTTGCCGCGCTCACCTGGGTCATTCCGGCCGGGCAGTATGAGCGCTCCTTCAACACCGCGCTCGATAGGGAGGTGC
CGGTCGCCGGCACTTATCAGACGACGGACCCGAACCCGCAGGGCATCTTCGACGTCATCATGGCGCCGATCGCCGGGCTC
TACGATCCGGCCAGCGGCACGGCCAATGCCATCGACGTGGCTCTGTTCGTCCTCGTCATCGGCGGCTTCATCGGCGTGGT
CGCCTCGACCGGTGCCATCAATGCCGGTGTGGGCGGTGCGATGACGGCGCTGCGCGGCCGGGAGAAGTGGATGATCCCGG
TTCTGATGGGGCTGTTCGCCTTCGGCGGCACGACCTATGGCATGGCCGAAGAGACGCTGGCCTTCTACATGCTCCTGATC
CCGGTCATGATCGCAGCGCGTTATGATGCGGTCACCGCGGTGGCGGTGATCCTGCTCGGCGCGGGCGTCGGTGTGCTTGG
CTCGACCGTGAATGCGTTCGCCACGGTGATCGCGTCGGATGCCGCCGGTATCCCCTTCACTCAAGGGATCGTGCTGCGCT
TCGTCATCCTCGGCCTCTCATGGCTCGCCTGCGTCATCTACGTGATGCGGTATGCCGAGCGCGTGAGGCTCGATCCTACG
AAGTCGCTCGTCTACGACCGCAAGGCCGAAAACGAGAAGCACTTCCTCGCCGGCCACGAGAACGACGCCGCACTCGAATT
CACCGGCCTGCACAAGATCGTGCTGGCACTCTTTGGTCTGACCTTCGTGGTGATGATCTGGGGCGTGCTCTATGGCGGCT
GGTGGATGGGCGAGATGACTGGCCTGTTCCTCGCCTCCGCGCTTCTCATCGGCATTATCGCACGGACCGGCGAGCAGAAA
TTCGTTGATGCGTTCCTGAACGGCGCGCGCGATCTCCTGGGTGTTGCCCTCATCATCGGGCTAGCTCGCGGCATCGTCGT
CATCATGGATGCGGGCAAGATCACCGACACCATCCTGCATTGGGCCGAGGTCTCGGTCTCCGGCCTGTCGGCGGTGGTGT
TCGTCAATGTTATCTACTGGATCGAGGTGCTTCTGTCCTTCTTCGTGCCCTCGTCCTCCGGTCTCGCCGTGCTCAGCATG
CCGATCATGGCGCCGGTGGCCGATTTCGTCGGCACGGGACGCGATCTGGTGGTCACCGCCTATCAATCGGCCAACGGCCT
CGTGAACCTCGTCAACCCGACCTTCGCGGTGGTTATGGGCGCGCTCGCCATCGGCCGGGTGCCCTATGAGCGCTGGCTCG
CCTTCATGTGGCCTCTGCTCGTCATCCTGTCGGCGATCATCATGATCTGCCTCAGCGTCGCAACCGTTTTCGCCTGA

Upstream 100 bases:

>100_bases
GACGTTGCGCTGGATCAAAGTTTGCGCGGCGCGTTCGAGCTAGGGGGATTGATGACTGCCGAAAGGGCGGTCCTGTCAAT
ACTTTCCAGGAGACGCTGTC

Downstream 100 bases:

>100_bases
GGAGACCGACATGTCCCTTGTCTACGGAGTGCACTCGGAAGTGGGCAAGCTGCGCCGCGTCATGGTGCATAGGCCCGGGA
CGGCGCTGGCGCGCCTGACG

Product: C4-dicarboxylate anaerobic carrier

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MAIASDATEPRRLPFPSAFTILFGLIILVAALTWVIPAGQYERSFNTALDREVPVAGTYQTTDPNPQGIFDVIMAPIAGL
YDPASGTANAIDVALFVLVIGGFIGVVASTGAINAGVGGAMTALRGREKWMIPVLMGLFAFGGTTYGMAEETLAFYMLLI
PVMIAARYDAVTAVAVILLGAGVGVLGSTVNAFATVIASDAAGIPFTQGIVLRFVILGLSWLACVIYVMRYAERVRLDPT
KSLVYDRKAENEKHFLAGHENDAALEFTGLHKIVLALFGLTFVVMIWGVLYGGWWMGEMTGLFLASALLIGIIARTGEQK
FVDAFLNGARDLLGVALIIGLARGIVVIMDAGKITDTILHWAEVSVSGLSAVVFVNVIYWIEVLLSFFVPSSSGLAVLSM
PIMAPVADFVGTGRDLVVTAYQSANGLVNLVNPTFAVVMGALAIGRVPYERWLAFMWPLLVILSAIIMICLSVATVFA

Sequences:

>Translated_478_residues
MAIASDATEPRRLPFPSAFTILFGLIILVAALTWVIPAGQYERSFNTALDREVPVAGTYQTTDPNPQGIFDVIMAPIAGL
YDPASGTANAIDVALFVLVIGGFIGVVASTGAINAGVGGAMTALRGREKWMIPVLMGLFAFGGTTYGMAEETLAFYMLLI
PVMIAARYDAVTAVAVILLGAGVGVLGSTVNAFATVIASDAAGIPFTQGIVLRFVILGLSWLACVIYVMRYAERVRLDPT
KSLVYDRKAENEKHFLAGHENDAALEFTGLHKIVLALFGLTFVVMIWGVLYGGWWMGEMTGLFLASALLIGIIARTGEQK
FVDAFLNGARDLLGVALIIGLARGIVVIMDAGKITDTILHWAEVSVSGLSAVVFVNVIYWIEVLLSFFVPSSSGLAVLSM
PIMAPVADFVGTGRDLVVTAYQSANGLVNLVNPTFAVVMGALAIGRVPYERWLAFMWPLLVILSAIIMICLSVATVFA
>Mature_477_residues
AIASDATEPRRLPFPSAFTILFGLIILVAALTWVIPAGQYERSFNTALDREVPVAGTYQTTDPNPQGIFDVIMAPIAGLY
DPASGTANAIDVALFVLVIGGFIGVVASTGAINAGVGGAMTALRGREKWMIPVLMGLFAFGGTTYGMAEETLAFYMLLIP
VMIAARYDAVTAVAVILLGAGVGVLGSTVNAFATVIASDAAGIPFTQGIVLRFVILGLSWLACVIYVMRYAERVRLDPTK
SLVYDRKAENEKHFLAGHENDAALEFTGLHKIVLALFGLTFVVMIWGVLYGGWWMGEMTGLFLASALLIGIIARTGEQKF
VDAFLNGARDLLGVALIIGLARGIVVIMDAGKITDTILHWAEVSVSGLSAVVFVNVIYWIEVLLSFFVPSSSGLAVLSMP
IMAPVADFVGTGRDLVVTAYQSANGLVNLVNPTFAVVMGALAIGRVPYERWLAFMWPLLVILSAIIMICLSVATVFA

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycgA [H]

Homologues:

Organism=Escherichia coli, GI87082082, Length=507, Percent_Identity=31.5581854043393, Blast_Score=223, Evalue=3e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018387
- InterPro:   IPR018385 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 50828; Mature: 50697

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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ECCCCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AIASDATEPRRLPFPSAFTILFGLIILVAALTWVIPAGQYERSFNTALDREVPVAGTYQ
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC
TTDPNPQGIFDVIMAPIAGLYDPASGTANAIDVALFVLVIGGFIGVVASTGAINAGVGGA
CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
MTALRGREKWMIPVLMGLFAFGGTTYGMAEETLAFYMLLIPVMIAARYDAVTAVAVILLG
HHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGVGVLGSTVNAFATVIASDAAGIPFTQGIVLRFVILGLSWLACVIYVMRYAERVRLDPT
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
KSLVYDRKAENEKHFLAGHENDAALEFTGLHKIVLALFGLTFVVMIWGVLYGGWWMGEMT
HHHHHCCCCCCCCCEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
GLFLASALLIGIIARTGEQKFVDAFLNGARDLLGVALIIGLARGIVVIMDAGKITDTILH
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHH
WAEVSVSGLSAVVFVNVIYWIEVLLSFFVPSSSGLAVLSMPIMAPVADFVGTGRDLVVTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
YQSANGLVNLVNPTFAVVMGALAIGRVPYERWLAFMWPLLVILSAIIMICLSVATVFA
ECCCCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]